Linux workstation

Debian 13 (Trixie) native package

kraken2

taxonomic classification system using exact k-mer matches

Packages / Debian 13 (Trixie) / science / kraken2

[Source: kraken2]

Package: kraken2

Maintainers:

Debian Med Packaging Team

External Resources:

Homepage: [www.ccb.jhu.edu]

taxonomic classification system using exact k-mer matches

Keine veröffentlichten Datensätze passen zu diesem Suite- und Architekturfilter.

Paketdateipfade (61)

Paths come from the repository package-file index for the observed builds. They describe archive/package associations, not every file that will exist on a running system after maintainer scripts, alternatives, generated state, diversions, or installation choices.

  • /usr/bin/kraken2
  • /usr/bin/kraken2-build
  • /usr/bin/kraken2-inspect
  • /usr/lib/kraken2/16S_gg_installation.sh
  • /usr/lib/kraken2/16S_rdp_installation.sh
  • /usr/lib/kraken2/16S_silva_installation.sh
  • /usr/lib/kraken2/add_to_library.sh
  • /usr/lib/kraken2/build_db
  • /usr/lib/kraken2/build_gg_taxonomy.pl
  • /usr/lib/kraken2/build_kraken2_db.sh
  • /usr/lib/kraken2/build_rdp_taxonomy.pl
  • /usr/lib/kraken2/build_silva_taxonomy.pl
  • /usr/lib/kraken2/classify
  • /usr/lib/kraken2/clean_db.sh
  • /usr/lib/kraken2/cp_into_tempfile.pl
  • /usr/lib/kraken2/download_genomic_library.sh
  • /usr/lib/kraken2/download_taxonomy.sh
  • /usr/lib/kraken2/dump_table
  • /usr/lib/kraken2/estimate_capacity
  • /usr/lib/kraken2/k2
  • /usr/lib/kraken2/k2mask
  • /usr/lib/kraken2/kraken2
  • /usr/lib/kraken2/kraken2-build
  • /usr/lib/kraken2/kraken2-inspect
  • /usr/lib/kraken2/kraken2lib.pm
  • /usr/lib/kraken2/lookup_accession_numbers
  • /usr/lib/kraken2/lookup_accession_numbers.pl
  • /usr/lib/kraken2/make_seqid2taxid_map.pl
  • /usr/lib/kraken2/mask_low_complexity.sh
  • /usr/lib/kraken2/rsync_from_ncbi.pl
  • /usr/lib/kraken2/scan_fasta_file.pl
  • /usr/lib/kraken2/standard_installation.sh
  • /usr/share/doc-base/kraken2.kraken2
  • /usr/share/doc/kraken2/changelog.Debian.arm64.gz
  • /usr/share/doc/kraken2/changelog.Debian.gz
  • /usr/share/doc/kraken2/changelog.gz
  • /usr/share/doc/kraken2/copyright
  • /usr/share/doc/kraken2/html/bar-bg.png
  • /usr/share/doc/kraken2/html/head.html
  • /usr/share/doc/kraken2/html/index.html
  • /usr/share/doc/kraken2/html/kraken.css
  • /usr/share/doc/kraken2/html/MANUAL.html
  • /usr/share/doc/kraken2/html/top.html
  • /usr/share/doc/kraken2/README.test
  • /usr/share/doc/kraken2/run-unit-test
  • /usr/share/doc/kraken2/test_data/Acartia_tonsa.fasta
  • /usr/share/doc/kraken2/test_data/Acinetobacter_phage.fasta.gz
  • /usr/share/doc/kraken2/test_data/test_db/taxonomy/citation.dmp
  • /usr/share/doc/kraken2/test_data/test_db/taxonomy/delnodes.dmp.gz
  • /usr/share/doc/kraken2/test_data/test_db/taxonomy/division.dmp
  • /usr/share/doc/kraken2/test_data/test_db/taxonomy/gc.prt.gz
  • /usr/share/doc/kraken2/test_data/test_db/taxonomy/gencode.dmp.gz
  • /usr/share/doc/kraken2/test_data/test_db/taxonomy/gi_taxid_nucl.dmp
  • /usr/share/doc/kraken2/test_data/test_db/taxonomy/merged.dmp.gz
  • /usr/share/doc/kraken2/test_data/test_db/taxonomy/names.dmp
  • /usr/share/doc/kraken2/test_data/test_db/taxonomy/nodes.dmp
  • /usr/share/doc/kraken2/test_data/test_db/taxonomy/readme.txt
  • /usr/share/doc/kraken2/test_data/test.fa
  • /usr/share/man/man1/kraken2.1.gz
  • /usr/share/man/man1/kraken2-build.1.gz
  • /usr/share/man/man1/kraken2-inspect.1.gz

Dieses Paket verwenden

OpenFactory kann dieses Betriebssystem in einer Browser-VM starten oder einen Image-Build mit dem nativen Paketnamen aus diesem Datensatz beginnen.

Versionen, Suiten und Repositories

Jede Zeile ist Paketindex-Metadaten für eine Version, Architektur, Suite und ein Repository. Namen, URLs und Größen stammen aus der Quelle; ein Link ist ein veränderbarer Abrufort, kein Weitergabanspruch von OpenFactory.

Keine veröffentlichten Datensätze passen zu diesem Suite- und Architekturfilter.

Prüfsummen und Beobachtungsdaten

For an APT source, signature verification authenticates the repository metadata chain and the Packages index containing this source-reported artifact digest. It does not certify package safety.

Vollständigkeit des Katalogsatzes

The completeness score measures metadata coverage, not software quality, security, compatibility, or suitability.

Summary and description
25/25
Artifact path and source digest
25/25
Dependency metadata
15/15
Package-file index
15/15
Homepage
5/5
License text
0/5
Source package or maintainer
10/10

Recorded total: 95/100

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3, Debian 13 (Trixie) main arm64 revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908. The cross-OS mapping is catalog-derived from the source-reported homepage; it does not establish authorship or publisher identity

Quellen und Herkunft

Field-source links above resolve here. Each source entry names the metadata publisher, trust tier, exact snapshot revision, signature result, and observation time; catalog-derived mappings are labeled separately.

  • Authoritative source; repository metadata signature verified, revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3

    Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.

    Repository-signature verification record
    Signed-object SHA-256
    98b25b5cd185c59d34aa6e4c3e9b5b8f01bbe9d104fe2dcfbcd30dc0a14a59ed
    Signer fingerprint
    4CB50190207B4758A3F73A796ED0E7B82643E131
    Keyring revision
    debian-archive-keyring.gpg
    SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
    Tool and policy
    gpgv (GnuPG) 2.4.9
    openfactory-software-catalog-signature-v1
    Verification time
    Sep 1, 2026
    Signed Release → package-index hash linkage

    Path: main/binary-amd64/Packages.xz
    Expected SHA-256: 3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
    Observed SHA-256: 3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
    Result: match verified

  • Authoritative source; repository metadata signature verified, revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908

    Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.

    Repository-signature verification record
    Signed-object SHA-256
    98b25b5cd185c59d34aa6e4c3e9b5b8f01bbe9d104fe2dcfbcd30dc0a14a59ed
    Signer fingerprint
    4CB50190207B4758A3F73A796ED0E7B82643E131
    Keyring revision
    debian-archive-keyring.gpg
    SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
    Tool and policy
    gpgv (GnuPG) 2.4.9
    openfactory-software-catalog-signature-v1
    Verification time
    Sep 1, 2026
    Signed Release → package-index hash linkage

    Path: main/binary-arm64/Packages.xz
    Expected SHA-256: 753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908
    Observed SHA-256: 753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908
    Result: match verified

kraken2 Package for Debian 13 (Trixie) | OpenFactory