Debian 13 (Trixie) native package

python3-gfapy

flexible and extensible software library for handling sequence graphs

Packages / Debian 13 (Trixie) / science / python3-gfapy

[Source: gfapy]

Package: python3-gfapy (1.2.3+dfsg-3)

Maintainers:

Debian Med Packaging Team

External Resources:

Homepage: [github.com]

flexible and extensible software library for handling sequence graphs

Other Packages Related to python3-gfapy:

dep: [python3] [any]
interactive high-level object-oriented language (default python3 version)

Download python3-gfapy

Architecture	Package Size	Installed Size	Files
arm64	75 KiB	493 KiB	[list of files]

Paketdateipfade (188)

Paths come from the repository package-file index for the observed builds. They describe archive/package associations, not every file that will exist on a running system after maintainer scripts, alternatives, generated state, diversions, or installation choices.

/usr/bin/gfapy-convert
/usr/bin/gfapy-mergelinear
/usr/bin/gfapy-renumber
/usr/bin/gfapy-validate
/usr/lib/python3/dist-packages/gfapy-1.2.3.egg-info/dependency_links.txt
/usr/lib/python3/dist-packages/gfapy-1.2.3.egg-info/not-zip-safe
/usr/lib/python3/dist-packages/gfapy-1.2.3.egg-info/PKG-INFO
/usr/lib/python3/dist-packages/gfapy-1.2.3.egg-info/top_level.txt
/usr/lib/python3/dist-packages/gfapy/alignment/alignment.py
/usr/lib/python3/dist-packages/gfapy/alignment/cigar.py
/usr/lib/python3/dist-packages/gfapy/alignment/__init__.py
/usr/lib/python3/dist-packages/gfapy/alignment/placeholder.py
/usr/lib/python3/dist-packages/gfapy/alignment/trace.py
/usr/lib/python3/dist-packages/gfapy/byte_array.py
/usr/lib/python3/dist-packages/gfapy/error.py
/usr/lib/python3/dist-packages/gfapy/field/alignment_gfa1.py
/usr/lib/python3/dist-packages/gfapy/field/alignment_gfa2.py
/usr/lib/python3/dist-packages/gfapy/field/alignment_list_gfa1.py
/usr/lib/python3/dist-packages/gfapy/field_array.py
/usr/lib/python3/dist-packages/gfapy/field/byte_array.py
/usr/lib/python3/dist-packages/gfapy/field/char.py
/usr/lib/python3/dist-packages/gfapy/field/comment.py
/usr/lib/python3/dist-packages/gfapy/field/custom_record_type.py
/usr/lib/python3/dist-packages/gfapy/field/field.py
/usr/lib/python3/dist-packages/gfapy/field/float.py
/usr/lib/python3/dist-packages/gfapy/field/generic.py
/usr/lib/python3/dist-packages/gfapy/field/identifier_gfa2.py
/usr/lib/python3/dist-packages/gfapy/field/identifier_list_gfa2.py
/usr/lib/python3/dist-packages/gfapy/field/__init__.py
/usr/lib/python3/dist-packages/gfapy/field/integer.py
/usr/lib/python3/dist-packages/gfapy/field/json.py
/usr/lib/python3/dist-packages/gfapy/field/numeric_array.py
/usr/lib/python3/dist-packages/gfapy/field/optional_identifier_gfa2.py
/usr/lib/python3/dist-packages/gfapy/field/optional_integer.py
/usr/lib/python3/dist-packages/gfapy/field/orientation.py
/usr/lib/python3/dist-packages/gfapy/field/oriented_identifier_gfa2.py
/usr/lib/python3/dist-packages/gfapy/field/oriented_identifier_list_gfa1.py
/usr/lib/python3/dist-packages/gfapy/field/oriented_identifier_list_gfa2.py
/usr/lib/python3/dist-packages/gfapy/field/parser.py
/usr/lib/python3/dist-packages/gfapy/field/path_name_gfa1.py
/usr/lib/python3/dist-packages/gfapy/field/position_gfa1.py
/usr/lib/python3/dist-packages/gfapy/field/position_gfa2.py
/usr/lib/python3/dist-packages/gfapy/field/segment_name_gfa1.py
/usr/lib/python3/dist-packages/gfapy/field/sequence_gfa1.py
/usr/lib/python3/dist-packages/gfapy/field/sequence_gfa2.py
/usr/lib/python3/dist-packages/gfapy/field/string.py
/usr/lib/python3/dist-packages/gfapy/field/validator.py
/usr/lib/python3/dist-packages/gfapy/field/writer.py
/usr/lib/python3/dist-packages/gfapy/gfa.py
/usr/lib/python3/dist-packages/gfapy/graph_operations/artifacts.py
/usr/lib/python3/dist-packages/gfapy/graph_operations/copy_number.py
/usr/lib/python3/dist-packages/gfapy/graph_operations/graph_operations.py
/usr/lib/python3/dist-packages/gfapy/graph_operations/__init__.py
/usr/lib/python3/dist-packages/gfapy/graph_operations/invertible_segments.py
/usr/lib/python3/dist-packages/gfapy/graph_operations/linear_paths.py
/usr/lib/python3/dist-packages/gfapy/graph_operations/multiplication.py
/usr/lib/python3/dist-packages/gfapy/graph_operations/p_bubbles.py
/usr/lib/python3/dist-packages/gfapy/graph_operations/redundant_linear_paths.py
/usr/lib/python3/dist-packages/gfapy/graph_operations/superfluous_links.py
/usr/lib/python3/dist-packages/gfapy/graph_operations/topology.py
/usr/lib/python3/dist-packages/gfapy/__init__.py
/usr/lib/python3/dist-packages/gfapy/lastpos.py
/usr/lib/python3/dist-packages/gfapy/line/comment/comment.py
/usr/lib/python3/dist-packages/gfapy/line/comment/construction.py
/usr/lib/python3/dist-packages/gfapy/line/comment/__init__.py
/usr/lib/python3/dist-packages/gfapy/line/comment/tags.py
/usr/lib/python3/dist-packages/gfapy/line/comment/version_conversion.py
/usr/lib/python3/dist-packages/gfapy/line/comment/writer.py
/usr/lib/python3/dist-packages/gfapy/line/common/cloning.py
/usr/lib/python3/dist-packages/gfapy/line/common/connection.py
/usr/lib/python3/dist-packages/gfapy/line/common/construction.py
/usr/lib/python3/dist-packages/gfapy/line/common/default_record_definition.py
/usr/lib/python3/dist-packages/gfapy/line/common/disconnection.py
/usr/lib/python3/dist-packages/gfapy/line/common/dynamic_fields.py
/usr/lib/python3/dist-packages/gfapy/line/common/equivalence.py
/usr/lib/python3/dist-packages/gfapy/line/common/field_data.py
/usr/lib/python3/dist-packages/gfapy/line/common/field_datatype.py
/usr/lib/python3/dist-packages/gfapy/line/common/__init__.py
/usr/lib/python3/dist-packages/gfapy/line/common/update_references.py
/usr/lib/python3/dist-packages/gfapy/line/common/validate.py
/usr/lib/python3/dist-packages/gfapy/line/common/version_conversion.py
/usr/lib/python3/dist-packages/gfapy/line/common/virtual_to_real.py
/usr/lib/python3/dist-packages/gfapy/line/common/writer.py
/usr/lib/python3/dist-packages/gfapy/line/custom_record/construction.py
/usr/lib/python3/dist-packages/gfapy/line/custom_record/custom_record.py
/usr/lib/python3/dist-packages/gfapy/line/custom_record/__init__.py
/usr/lib/python3/dist-packages/gfapy/line/edge/common/alignment_type.py
/usr/lib/python3/dist-packages/gfapy/line/edge/common/from_to.py
/usr/lib/python3/dist-packages/gfapy/line/edge/common/__init__.py
/usr/lib/python3/dist-packages/gfapy/line/edge/containment/canonical.py
/usr/lib/python3/dist-packages/gfapy/line/edge/containment/containment.py
/usr/lib/python3/dist-packages/gfapy/line/edge/containment/__init__.py
/usr/lib/python3/dist-packages/gfapy/line/edge/containment/pos.py
/usr/lib/python3/dist-packages/gfapy/line/edge/containment/to_gfa2.py
/usr/lib/python3/dist-packages/gfapy/line/edge/edge.py
/usr/lib/python3/dist-packages/gfapy/line/edge/gfa1/alignment_type.py
/usr/lib/python3/dist-packages/gfapy/line/edge/gfa1/__init__.py
/usr/lib/python3/dist-packages/gfapy/line/edge/gfa1/oriented_segments.py
/usr/lib/python3/dist-packages/gfapy/line/edge/gfa1/other.py
/usr/lib/python3/dist-packages/gfapy/line/edge/gfa1/references.py
/usr/lib/python3/dist-packages/gfapy/line/edge/gfa1/to_gfa2.py
/usr/lib/python3/dist-packages/gfapy/line/edge/gfa2/alignment_type.py
/usr/lib/python3/dist-packages/gfapy/line/edge/gfa2/gfa2.py
/usr/lib/python3/dist-packages/gfapy/line/edge/gfa2/__init__.py
/usr/lib/python3/dist-packages/gfapy/line/edge/gfa2/other.py
/usr/lib/python3/dist-packages/gfapy/line/edge/gfa2/references.py
/usr/lib/python3/dist-packages/gfapy/line/edge/gfa2/to_gfa1.py
/usr/lib/python3/dist-packages/gfapy/line/edge/gfa2/validation.py
/usr/lib/python3/dist-packages/gfapy/line/edge/__init__.py
/usr/lib/python3/dist-packages/gfapy/line/edge/link/canonical.py
/usr/lib/python3/dist-packages/gfapy/line/edge/link/complement.py
/usr/lib/python3/dist-packages/gfapy/line/edge/link/equivalence.py
/usr/lib/python3/dist-packages/gfapy/line/edge/link/__init__.py
/usr/lib/python3/dist-packages/gfapy/line/edge/link/link.py
/usr/lib/python3/dist-packages/gfapy/line/edge/link/references.py
/usr/lib/python3/dist-packages/gfapy/line/edge/link/to_gfa2.py
/usr/lib/python3/dist-packages/gfapy/line/fragment/fragment.py
/usr/lib/python3/dist-packages/gfapy/line/fragment/__init__.py
/usr/lib/python3/dist-packages/gfapy/line/fragment/references.py
/usr/lib/python3/dist-packages/gfapy/line/fragment/validation.py
/usr/lib/python3/dist-packages/gfapy/line/gap/gap.py
/usr/lib/python3/dist-packages/gfapy/line/gap/__init__.py
/usr/lib/python3/dist-packages/gfapy/line/gap/references.py
/usr/lib/python3/dist-packages/gfapy/line/group/gfa2/__init__.py
/usr/lib/python3/dist-packages/gfapy/line/group/gfa2/references.py
/usr/lib/python3/dist-packages/gfapy/line/group/gfa2/same_id.py
/usr/lib/python3/dist-packages/gfapy/line/group/group.py
/usr/lib/python3/dist-packages/gfapy/line/group/__init__.py
/usr/lib/python3/dist-packages/gfapy/line/group/ordered/captured_path.py
/usr/lib/python3/dist-packages/gfapy/line/group/ordered/__init__.py
/usr/lib/python3/dist-packages/gfapy/line/group/ordered/ordered.py
/usr/lib/python3/dist-packages/gfapy/line/group/ordered/references.py
/usr/lib/python3/dist-packages/gfapy/line/group/ordered/to_gfa1.py
/usr/lib/python3/dist-packages/gfapy/line/group/path/captured_path.py
/usr/lib/python3/dist-packages/gfapy/line/group/path/__init__.py
/usr/lib/python3/dist-packages/gfapy/line/group/path/path.py
/usr/lib/python3/dist-packages/gfapy/line/group/path/references.py
/usr/lib/python3/dist-packages/gfapy/line/group/path/to_gfa2.py
/usr/lib/python3/dist-packages/gfapy/line/group/path/topology.py
/usr/lib/python3/dist-packages/gfapy/line/group/path/validation.py
/usr/lib/python3/dist-packages/gfapy/line/group/unordered/induced_set.py
/usr/lib/python3/dist-packages/gfapy/line/group/unordered/__init__.py
/usr/lib/python3/dist-packages/gfapy/line/group/unordered/references.py
/usr/lib/python3/dist-packages/gfapy/line/group/unordered/unordered.py
/usr/lib/python3/dist-packages/gfapy/line/header/connection.py
/usr/lib/python3/dist-packages/gfapy/line/header/field_data.py
/usr/lib/python3/dist-packages/gfapy/line/header/header.py
/usr/lib/python3/dist-packages/gfapy/line/header/__init__.py
/usr/lib/python3/dist-packages/gfapy/line/header/multiline.py
/usr/lib/python3/dist-packages/gfapy/line/header/version_conversion.py
/usr/lib/python3/dist-packages/gfapy/line/__init__.py
/usr/lib/python3/dist-packages/gfapy/line/line.py
/usr/lib/python3/dist-packages/gfapy/lines/collections.py
/usr/lib/python3/dist-packages/gfapy/lines/creators.py
/usr/lib/python3/dist-packages/gfapy/lines/destructors.py
/usr/lib/python3/dist-packages/gfapy/line/segment/coverage.py
/usr/lib/python3/dist-packages/gfapy/line/segment/gfa1.py
/usr/lib/python3/dist-packages/gfapy/line/segment/gfa1_to_gfa2.py
/usr/lib/python3/dist-packages/gfapy/line/segment/gfa2.py
/usr/lib/python3/dist-packages/gfapy/line/segment/gfa2_to_gfa1.py
/usr/lib/python3/dist-packages/gfapy/line/segment/__init__.py
/usr/lib/python3/dist-packages/gfapy/line/segment/length_gfa1.py
/usr/lib/python3/dist-packages/gfapy/line/segment/references.py
/usr/lib/python3/dist-packages/gfapy/line/segment/segment.py
/usr/lib/python3/dist-packages/gfapy/line/segment/writer_wo_sequence.py
/usr/lib/python3/dist-packages/gfapy/lines/finders.py
/usr/lib/python3/dist-packages/gfapy/lines/headers.py
/usr/lib/python3/dist-packages/gfapy/lines/__init__.py
/usr/lib/python3/dist-packages/gfapy/lines/lines.py
/usr/lib/python3/dist-packages/gfapy/line/unknown/__init__.py
/usr/lib/python3/dist-packages/gfapy/line/unknown/unknown.py
/usr/lib/python3/dist-packages/gfapy/logger.py
/usr/lib/python3/dist-packages/gfapy/numeric_array.py
/usr/lib/python3/dist-packages/gfapy/oriented_line.py
/usr/lib/python3/dist-packages/gfapy/placeholder.py
/usr/lib/python3/dist-packages/gfapy/rgfa.py
/usr/lib/python3/dist-packages/gfapy/segment_end_path.py
/usr/lib/python3/dist-packages/gfapy/segment_end.py
/usr/lib/python3/dist-packages/gfapy/sequence.py
/usr/lib/python3/dist-packages/gfapy/symbol_invert.py
/usr/share/doc/python3-gfapy/changelog.Debian.gz
/usr/share/doc/python3-gfapy/changelog.gz
/usr/share/doc/python3-gfapy/copyright
/usr/share/lintian/overrides/python3-gfapy
/usr/share/man/man1/gfapy-convert.1.gz
/usr/share/man/man1/gfapy-mergelinear.1.gz
/usr/share/man/man1/gfapy-renumber.1.gz
/usr/share/man/man1/gfapy-validate.1.gz

Field source: Debian 13 (Trixie) main arm64 revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908

Dieses Paket verwenden

OpenFactory kann dieses Betriebssystem in einer Browser-VM starten oder einen Image-Build mit dem nativen Paketnamen aus diesem Datensatz beginnen.

Debian 13 (Trixie) im Browser testen Image mit python3-gfapy bauen

Versionen, Suiten und Repositories

Jede Zeile ist Paketindex-Metadaten für eine Version, Architektur, Suite und ein Repository. Namen, URLs und Größen stammen aus der Quelle; ein Link ist ein veränderbarer Abrufort, kein Weitergabanspruch von OpenFactory.

Version	Release	Architecture	Repository	Package size	Installed size	Publisher repository artifact
1.2.3+dfsg-3	trixie / main	arm64	Debian 13 · main · arm64	75 KiB	493 KiB	pool/main/g/gfapy/python3-gfapy_1.2.3+dfsg-3_arm64.deb

Field source: Debian 13 (Trixie) main arm64 revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908

Prüfsummen und Beobachtungsdaten

For an APT source, signature verification authenticates the repository metadata chain and the Packages index containing this source-reported artifact digest. It does not certify package safety.

1.2.3+dfsg-3 / arm64Observed Sep 1, 2026 to Sep 1, 2026

Verification status: Metadata observed; artifact bytes were not independently fetched or hashed by this catalog import. The digest below is source-reported.

Source-reported sha256: 9ec1222fde6856c9d067c0fa3399058937e011d10eaffad6e6f40dfda734988b

After downloading that exact artifact, compare its bytes with the source-reported expected digest:

printf '%s  %s\n' '9ec1222fde6856c9d067c0fa3399058937e011d10eaffad6e6f40dfda734988b' 'python3-gfapy_1.2.3+dfsg-3_arm64.deb' | sha256sum --check --strict -

A match establishes equality with the repository metadata value. It does not establish safety or catalog-side artifact retrieval.

Field source: Debian 13 (Trixie) main arm64 revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908

Vollständigkeit des Katalogsatzes

The completeness score measures metadata coverage, not software quality, security, compatibility, or suitability.

Summary and description: 25/25
Artifact path and source digest: 25/25
Dependency metadata: 15/15
Package-file index: 15/15
Homepage: 5/5
License text: 0/5
Source package or maintainer: 10/10

Recorded total: 95/100

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3, Debian 13 (Trixie) main arm64 revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908. The cross-OS mapping is catalog-derived from the source-reported homepage; it does not establish authorship or publisher identity

Quellen und Herkunft

Field-source links above resolve here. Each source entry names the metadata publisher, trust tier, exact snapshot revision, signature result, and observation time; catalog-derived mappings are labeled separately.

Debian 13 (Trixie) main amd64Sep 1, 2026
Authoritative source; repository metadata signature verified, revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.
Repository-signature verification record
Signed object
https://deb.debian.org/debian/dists/trixie/InRelease
Signed-object SHA-256
98b25b5cd185c59d34aa6e4c3e9b5b8f01bbe9d104fe2dcfbcd30dc0a14a59ed
Signer fingerprint
4CB50190207B4758A3F73A796ED0E7B82643E131
Keyring revision
debian-archive-keyring.gpg
SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
Tool and policy
gpgv (GnuPG) 2.4.9
openfactory-software-catalog-signature-v1
Verification time
Sep 1, 2026
Signed Release → package-index hash linkage
Path: main/binary-amd64/Packages.xz
Expected SHA-256: 3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
Observed SHA-256: 3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
Result: match verified
Debian 13 (Trixie) main arm64Sep 1, 2026
Authoritative source; repository metadata signature verified, revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908
Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.
Repository-signature verification record
Signed object
https://deb.debian.org/debian/dists/trixie/InRelease
Signed-object SHA-256
98b25b5cd185c59d34aa6e4c3e9b5b8f01bbe9d104fe2dcfbcd30dc0a14a59ed
Signer fingerprint
4CB50190207B4758A3F73A796ED0E7B82643E131
Keyring revision
debian-archive-keyring.gpg
SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
Tool and policy
gpgv (GnuPG) 2.4.9
openfactory-software-catalog-signature-v1
Verification time
Sep 1, 2026
Signed Release → package-index hash linkage
Path: main/binary-arm64/Packages.xz
Expected SHA-256: 753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908
Observed SHA-256: 753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908
Result: match verified