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Fedora 43 native package

fastx_toolkit

Tools to process short-reads FASTA/FASTQ files

Packages / Fedora 43 / Unspecified / fastx_toolkit

[Source: fastx_toolkit]

Package: fastx_toolkit (0.0.14-38.fc43)

External Resources:

Homepage: [hannonlab.cshl.edu]

Similar packages:

Tools to process short-reads FASTA/FASTQ files

The FASTX-Toolkit is a collection of command line tools for Short-Reads FASTA/FASTQ files preprocessing. Next-Generation sequencing machines usually produce FASTA or FASTQ files, containing multiple short-reads sequences (possibly with quality information). The main processing of such FASTA/FASTQ files is mapping (aka aligning) the sequences to reference genomes or other databases using specialized programs. Example of such mapping programs are: Blat, SHRiMP, LastZ, MAQ and many many others. However, It is sometimes more productive to preprocess the FASTA/FASTQ files before mapping the sequences to the genome - manipulating the sequences to produce better mapping results. The FASTX-Toolkit tools perform some of these preprocessing tasks.

Other Packages Related to fastx_toolkit:

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Download fastx_toolkit

ArchitecturePackage SizeInstalled SizeFiles
aarch64120 KiB1.1 MiB[list of files]
x86_64122 KiB426 KiB[list of files]

Paketdateipfade (86)

Paths come from the repository package-file index for the observed builds. They describe archive/package associations, not every file that will exist on a running system after maintainer scripts, alternatives, generated state, diversions, or installation choices.

  • /usr/bin/fasta_clipping_histogram.pl
  • /usr/bin/fasta_formatter
  • /usr/bin/fasta_nucleotide_changer
  • /usr/bin/fastq_masker
  • /usr/bin/fastq_quality_boxplot_graph.sh
  • /usr/bin/fastq_quality_converter
  • /usr/bin/fastq_quality_filter
  • /usr/bin/fastq_quality_trimmer
  • /usr/bin/fastq_to_fasta
  • /usr/bin/fastx_artifacts_filter
  • /usr/bin/fastx_barcode_splitter.pl
  • /usr/bin/fastx_clipper
  • /usr/bin/fastx_collapser
  • /usr/bin/fastx_nucleotide_distribution_graph.sh
  • /usr/bin/fastx_nucleotide_distribution_line_graph.sh
  • /usr/bin/fastx_quality_stats
  • /usr/bin/fastx_renamer
  • /usr/bin/fastx_reverse_complement
  • /usr/bin/fastx_trimmer
  • /usr/bin/fastx_uncollapser
  • /usr/lib/.build-id
  • /usr/lib/.build-id/04
  • /usr/lib/.build-id/04/e360cb6201b441295578262ff8b8a035ffa524
  • /usr/lib/.build-id/07
  • /usr/lib/.build-id/07/7920a1a7087cf00aa07c08060f00f83d705dba
  • /usr/lib/.build-id/08
  • /usr/lib/.build-id/08/b95f8ab79d87cf6b1203c8d0029fc4c0bbbfa9
  • /usr/lib/.build-id/0c
  • /usr/lib/.build-id/0c/3d77aac029d4533615851f862cce3fe04a191f
  • /usr/lib/.build-id/16
  • /usr/lib/.build-id/16/516400c8b6286f8a673b7964409340669f0102
  • /usr/lib/.build-id/16/8bdb7641b50bd3733e1d05291cb9163ac2d036
  • /usr/lib/.build-id/1b
  • /usr/lib/.build-id/1b/ca180531d12ed5be6569471e37612bee481fe6
  • /usr/lib/.build-id/26
  • /usr/lib/.build-id/26/20f73b49360cae159547779f47f058e1d75687
  • /usr/lib/.build-id/34
  • /usr/lib/.build-id/34/c6f04a579769b99288e0712fdaa5b64896600f
  • /usr/lib/.build-id/35
  • /usr/lib/.build-id/35/71fe65617e969c54045dddd78bd7f8496c5047
  • /usr/lib/.build-id/37
  • /usr/lib/.build-id/37/844717acf31f0bcb9f40caab6cddae8c6dbe78
  • /usr/lib/.build-id/3c
  • /usr/lib/.build-id/3c/d2dcec30773d38176b3d3f09ef470d176d9f3d
  • /usr/lib/.build-id/49
  • /usr/lib/.build-id/49/a37ff92e9c36f97bf9ebf6b9b819a03e75f8fc
  • /usr/lib/.build-id/54
  • /usr/lib/.build-id/54/6300fc9767e7048e583a303c4695b2e877e4f6
  • /usr/lib/.build-id/57
  • /usr/lib/.build-id/57/200a9aef32a7fd9466a482f153072ff00bb826
  • /usr/lib/.build-id/59
  • /usr/lib/.build-id/59/b0255f7a0c604363991f8f2cf41b307463baf6
  • /usr/lib/.build-id/62
  • /usr/lib/.build-id/62/e44d57a9d5e8c7e4df65a9201958e5a5808f63
  • /usr/lib/.build-id/6c
  • /usr/lib/.build-id/6c/99c4083096c96d63ced3c0b39ec66b6a5b2521
  • /usr/lib/.build-id/7e
  • /usr/lib/.build-id/7e/21ebcd1d41f28cc25e50d93ba2daa28e4afe98
  • /usr/lib/.build-id/89
  • /usr/lib/.build-id/89/6ed7423cf081cd82c98a088f9ef0d22732c85a
  • /usr/lib/.build-id/a2
  • /usr/lib/.build-id/a2/08056cd1722291dc1bd4410c6d1155475305c6
  • /usr/lib/.build-id/aa
  • /usr/lib/.build-id/aa/62f26ad1e8ed093241f98f551169b49a65cf70
  • /usr/lib/.build-id/b5
  • /usr/lib/.build-id/b5/85edd8c913b008b4dc7dfad12351631da9ff37
  • /usr/lib/.build-id/c1
  • /usr/lib/.build-id/c1/6a085d365260684f7e218632e8749d42a09160
  • /usr/lib/.build-id/ca
  • /usr/lib/.build-id/ca/49625008a6383c38f3b2a4130c173bbe70509e
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  • /usr/lib/.build-id/d8/ae659c901048985483b249822a4d42b3802af6
  • /usr/lib/.build-id/ee
  • /usr/lib/.build-id/ee/d7d0125417fbce2cc4c94ab050c5de08c54c16
  • /usr/lib/.build-id/f5
  • /usr/lib/.build-id/f5/da163af54c86a2060eabb7553375de76a50658
  • /usr/lib/.build-id/f8
  • /usr/lib/.build-id/f8/3ae471b407dc78925c8493eb9555705c547cfc
  • /usr/lib/.build-id/fe
  • /usr/lib/.build-id/fe/88d9776b07305e359f313c44e4b254d571cb0f
  • /usr/share/doc/fastx_toolkit
  • /usr/share/doc/fastx_toolkit/AUTHORS
  • /usr/share/doc/fastx_toolkit/COPYING
  • /usr/share/doc/fastx_toolkit/NEWS
  • /usr/share/doc/fastx_toolkit/README
  • /usr/share/doc/fastx_toolkit/THANKS

Field source: Fedora 43 Everything aarch64 revision 43-everything-aarch64:6431612747d987257399969298151d19cfe87ed26322be6987e7b00cd0ae66a2

Dieses Paket verwenden

OpenFactory kann dieses Betriebssystem in einer Browser-VM starten oder einen Image-Build mit dem nativen Paketnamen aus diesem Datensatz beginnen.

Fedora 43 im Browser testenImage mit fastx_toolkit bauen

Versionen, Suiten und Repositories

Jede Zeile ist Paketindex-Metadaten für eine Version, Architektur, Suite und ein Repository. Namen, URLs und Größen stammen aus der Quelle; ein Link ist ein veränderbarer Abrufort, kein Weitergabanspruch von OpenFactory.

VersionReleaseArchitectureRepositoryPackage sizeInstalled sizePublisher repository artifact
0.0.14-38.fc4343 / everythingaarch64Fedora 43 · Everything · aarch64120 KiB1.1 MiBPackages/f/fastx_toolkit-0.0.14-38.fc43.aarch64.rpm
0.0.14-38.fc4343 / everythingx86_64Fedora 43 · Everything · x86_64122 KiB426 KiBPackages/f/fastx_toolkit-0.0.14-38.fc43.x86_64.rpm

Field source: Fedora 43 Everything aarch64 revision 43-everything-aarch64:6431612747d987257399969298151d19cfe87ed26322be6987e7b00cd0ae66a2

Prüfsummen und Beobachtungsdaten

For an APT source, signature verification authenticates the repository metadata chain and the Packages index containing this source-reported artifact digest. It does not certify package safety.

0.0.14-38.fc43 / aarch64Observed Sep 1, 2026 to Sep 1, 2026

Verification status: Metadata observed; artifact bytes were not independently fetched or hashed by this catalog import. The digest below is source-reported.

Source-reported sha256: 501aa09630c3a81ce52c6a598b296eb100d73390c643b85e23277393effb78a4

After downloading that exact artifact, compare its bytes with the source-reported expected digest:

printf '%s %s\n' '501aa09630c3a81ce52c6a598b296eb100d73390c643b85e23277393effb78a4' 'fastx_toolkit-0.0.14-38.fc43.aarch64.rpm' | sha256sum --check --strict -

A match establishes equality with the repository metadata value. It does not establish safety or catalog-side artifact retrieval.

Field source: Fedora 43 Everything aarch64 revision 43-everything-aarch64:6431612747d987257399969298151d19cfe87ed26322be6987e7b00cd0ae66a2

0.0.14-38.fc43 / x86_64Observed Sep 1, 2026 to Sep 1, 2026

Verification status: Metadata observed; artifact bytes were not independently fetched or hashed by this catalog import. The digest below is source-reported.

Source-reported sha256: fd27159f6158208449e5384b505ebe9e5a8ee99bc00e98f14f5059ca900cd138

After downloading that exact artifact, compare its bytes with the source-reported expected digest:

printf '%s %s\n' 'fd27159f6158208449e5384b505ebe9e5a8ee99bc00e98f14f5059ca900cd138' 'fastx_toolkit-0.0.14-38.fc43.x86_64.rpm' | sha256sum --check --strict -

A match establishes equality with the repository metadata value. It does not establish safety or catalog-side artifact retrieval.

Field source: Fedora 43 Everything x86_64 revision 43-everything-x86_64:eb1d8634a798b5cfcef64b0114711f431f2cd186b55cce902f1883a32c6ff4f2

Vollständigkeit des Katalogsatzes

The completeness score measures metadata coverage, not software quality, security, compatibility, or suitability.

Summary and description
25/25
Artifact path and source digest
25/25
Dependency metadata
15/15
Package-file index
15/15
Homepage
5/5
License text
5/5
Source package or maintainer
10/10

Recorded total: 100/100

Field source: Fedora 43 Everything aarch64 revision 43-everything-aarch64:6431612747d987257399969298151d19cfe87ed26322be6987e7b00cd0ae66a2, Fedora 43 Everything x86_64 revision 43-everything-x86_64:eb1d8634a798b5cfcef64b0114711f431f2cd186b55cce902f1883a32c6ff4f2. The cross-OS mapping is catalog-derived from the source-reported homepage; it does not establish authorship or publisher identity

Quellen und Herkunft

Field-source links above resolve here. Each source entry names the metadata publisher, trust tier, exact snapshot revision, signature result, and observation time; catalog-derived mappings are labeled separately.

  • Fedora 43 Everything aarch64Sep 1, 2026

    Authoritative source; repository metadata signature verified, revision 43-everything-aarch64:6431612747d987257399969298151d19cfe87ed26322be6987e7b00cd0ae66a2

    Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.

    Repository-signature verification record
    Signed-object SHA-256
    6c2a7b7225a6bd12acd5c95dcd0350a0a5929e195692ff68eb31db0ee6b9897b
    Signer fingerprint
    Not recorded
    Keyring revision
    RPM-GPG-KEY-fedora-43-primary
    SHA-256 2b1449a082d3264dda8e18369f04e9ac4163bf3f8cb530b0783dc2ab064a08ec
    Tool and policy
    1
    openfactory-software-catalog-signature-v1
    Verification time
    Sep 1, 2026
    Signed Release → package-index hash linkage

    Path: Not recorded
    Expected SHA-256: Not recorded
    Observed SHA-256: Not recorded
    Result: match verified

  • Fedora 43 Everything x86_64Sep 1, 2026

    Authoritative source; repository metadata signature verified, revision 43-everything-x86_64:eb1d8634a798b5cfcef64b0114711f431f2cd186b55cce902f1883a32c6ff4f2

    Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.

    Repository-signature verification record
    Signed-object SHA-256
    42c0002750de6066124693fff143f4854c1e29474d893f7e6a7616012d41338f
    Signer fingerprint
    Not recorded
    Keyring revision
    RPM-GPG-KEY-fedora-43-primary
    SHA-256 2b1449a082d3264dda8e18369f04e9ac4163bf3f8cb530b0783dc2ab064a08ec
    Tool and policy
    1
    openfactory-software-catalog-signature-v1
    Verification time
    Sep 1, 2026
    Signed Release → package-index hash linkage

    Path: Not recorded
    Expected SHA-256: Not recorded
    Observed SHA-256: Not recorded
    Result: match verified

fastx_toolkit Package for Fedora 43 | OpenFactory