python3-biopython

dep: [python3-numpy] (>= 1:1.22.0)

Fast array facility to the Python 3 language

dep: python3-numpy-abi9

Package not available

dep: [python3] (<< 3.12)

interactive high-level object-oriented language (default python3 version)

dep: [python3] (>= 3.11~)

interactive high-level object-oriented language (default python3 version)

dep: [python3] [any]

interactive high-level object-oriented language (default python3 version)

dep: [libc6] (>= 2.14)

GNU C Library: Shared libraries

dep: [python3-renderpm]

python low level render interface

dep: [python3-reportlab]

ReportLab library to create PDF documents using Python3

dep: [w3c-sgml-lib]

w3.org DTD and catalog files

rec: [python-biopython-doc] (= 1.80+dfsg-4)

Documentation for the Biopython library

rec: [ncbi-blast+] (>= 2.10.1-3)

next generation suite of BLAST sequence search tools

sug: [python3-tk]

Tkinter - Writing Tk applications with Python 3.x

sug: [bwa]

Burrows-Wheeler Aligner

sug: [clustalo]

General-purpose multiple sequence alignment program for proteins

sug: [clustalw]

global multiple nucleotide or peptide sequence alignment

sug: [dialign]

Segment-based multiple sequence alignment

sug: [dssp] (>= 4.0.0)

protein secondary structure assignment based on 3D structure

sug: [emboss]

European molecular biology open software suite

sug: [fasttree]

phylogenetic trees from alignments of nucleotide or protein sequences

sug: [mafft]

Multiple alignment program for amino acid or nucleotide sequences

sug: [muscle3]

multiple alignment program of protein sequences

sug: [phylip]

package of programs for inferring phylogenies

sug: [phyml]

Phylogenetic estimation using Maximum Likelihood

sug: [prank]

Probabilistic Alignment Kit for DNA, codon and amino-acid sequences

sug: [probcons]

PROBabilistic CONSistency-based multiple sequence alignment

sug: [python3-mysqldb]

Python interface to MySQL

sug: [python3-matplotlib]

Python based plotting system in a style similar to Matlab (Python 3)

sug: [python3-mmtf]

binary encoding of biological structures (Python 3)

sug: [python3-pil]

Python Imaging Library (Python3)

sug: [python3-rdflib]

Python 3 library containing an RDF triple store and RDF parsers/serializers

sug: [python3-psycopg2]

Python 3 module for PostgreSQL

sug: [python3-scipy]

scientific tools for Python 3

sug: [raxml]

Randomized Axelerated Maximum Likelihood of phylogenetic trees

sug: [samtools]

processing sequence alignments in SAM, BAM and CRAM formats

sug: [t-coffee]

Multiple Sequence Alignment

sug: [wise]

comparison of biopolymers, like DNA and protein sequences