Packages / Debian 13 (Trixie) / science / nast-ier
Package: nast-ier (20101212+dfsg1-6+b1)
Maintainers:
External Resources:
Homepage: [microbiomeutil.sourceforge.net]
Similar packages:
- [chimeraslayer]
detects likely chimeras in PCR amplified DNA
- [microbiomeutil-data]
Reference 16S sequences and NAST-alignments used by microbiomeutil tools
- [wigeon]
reimplementation of the Pintail 16S DNA anomaly detection utility
NAST-based DNA alignment tool
Other Packages Related to nast-ier:
dep: [libc6] (>= 2.34)
GNU C Library: Shared libraries
dep: [microbiomeutil-data]
Reference 16S sequences and NAST-alignments used by microbiomeutil tools
dep: [cdbfasta]
Constant DataBase indexing and retrieval tools for multi-FASTA files
rec: [ncbi-blast+]
next generation suite of BLAST sequence search tools
Download nast-ier
| Architecture | Package Size | Installed Size | Files |
|---|---|---|---|
| amd64 | 20 KiB | 99 KiB | [list of files] |
| arm64 | 20 KiB | 148 KiB | [list of files] |
Chemins de fichiers du paquet (23)
Paths come from the repository package-file index for the observed builds. They describe archive/package associations, not every file that will exist on a running system after maintainer scripts, alternatives, generated state, diversions, or installation choices.
- /usr/bin/nast-ier
- /usr/lib/NAST-iEr/iterative_refinement/compare_DBs.pl
- /usr/lib/NAST-iEr/iterative_refinement/iteratively_realign_db_selfsearch.pl
- /usr/lib/NAST-iEr/iterative_refinement/quant_differences.pl
- /usr/lib/NAST-iEr/NAST-iEr
- /usr/lib/NAST-iEr/PerlLib/CdbTools.pm
- /usr/lib/NAST-iEr/PerlLib/Fasta_reader.pm
- /usr/lib/NAST-iEr/PerlLib/Nuc_translator.pm
- /usr/lib/NAST-iEr/README
- /usr/lib/NAST-iEr/run_NAST-iEr.pl
- /usr/lib/NAST-iEr/util/apply_NAST_MASK.pl
- /usr/lib/NAST-iEr/util/masks/eco.prokMSA
- /usr/lib/NAST-iEr/util/masks/lanemask.NAST
- /usr/lib/NAST-iEr/util/mfasta_remove_allGapCols.pl
- /usr/lib/NAST-iEr/util/mfasta_remove_gaps.pl
- /usr/lib/NAST-iEr/util/show_malign_no_gap_no_identical_cols.pl
- /usr/lib/NAST-iEr/util/show_malign_no_gap.pl
- /usr/share/doc/nast-ier/changelog.Debian.arm64.gz
- /usr/share/doc/nast-ier/changelog.Debian.gz
- /usr/share/doc/nast-ier/copyright
- /usr/share/doc/nast-ier/examples
- /usr/share/doc/nast-ier/README
- /usr/share/man/man1/nast-ier.1.gz
Field source: Debian 13 (Trixie) main arm64 revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908
