Debian 12 (Bookworm) native package

fsa

Fast Statistical Alignment of protein, RNA or DNA sequences

Packages / Debian 12 (Bookworm) / science / fsa

Package: fsa (1.15.9+dfsg-6)

Maintainers:

Debian Med Packaging Team

External Resources:

Homepage: [fsa.sourceforge.net]

Fast Statistical Alignment of protein, RNA or DNA sequences

Other Packages Related to fsa:

dep: [libc6] (>= 2.29)
GNU C Library: Shared libraries
dep: [libgcc-s1] (>= 3.0)
GCC support library
dep: [libstdc++6] (>= 5.2)
GNU Standard C++ Library v3
dep: [mummer]
Efficient sequence alignment of full genomes
dep: [exonerate]
generic tool for pairwise sequence comparison

rec: [med-config] (>= 2.1)
Debian Med general config package

Download fsa

Architecture	Package Size	Installed Size	Files
amd64	684 KiB	4.2 MiB	[list of files]
arm64	580 KiB	3.7 MiB	[list of files]

Percorsi file del pacchetto (51)

Paths come from the repository package-file index for the observed builds. They describe archive/package associations, not every file that will exist on a running system after maintainer scripts, alternatives, generated state, diversions, or installation choices.

/usr/bin/fsa
/usr/bin/fsa-translate
/usr/bin/gapcleaner
/usr/bin/isect_mercator_alignment_gff
/usr/bin/map_coords
/usr/bin/map_gff_coords
/usr/bin/percentid
/usr/bin/prot2codon
/usr/bin/slice_fasta
/usr/bin/slice_fasta_gff
/usr/bin/slice_mercator_alignment
/usr/lib/debian-med/bin/translate
/usr/lib/debian-med/share/man/man1/translate.1.gz
/usr/share/doc/fsa/changelog.Debian.gz
/usr/share/doc/fsa/copyright
/usr/share/doc/fsa/examples/README
/usr/share/doc/fsa/examples/RV12.BBS12030.fasta
/usr/share/doc/fsa/examples/RV12.BBS12030.fasta.gui
/usr/share/doc/fsa/examples/RV12.BBS12030.fasta.probs
/usr/share/doc/fsa/examples/RV12.BBS12030.mfa
/usr/share/doc/fsa/examples/RV12.BBS12030.reference.mfa
/usr/share/doc/fsa/examples/RV12.BBS12030.reference.stock
/usr/share/doc/fsa/examples/RV12.BBS12030.stock
/usr/share/doc/fsa/examples/tRNA.aln1.fasta
/usr/share/doc/fsa/examples/tRNA.aln1.fasta.gui
/usr/share/doc/fsa/examples/tRNA.aln1.fasta.probs
/usr/share/doc/fsa/examples/tRNA.aln1.mfa
/usr/share/doc/fsa/examples/tRNA.aln1.reference.mfa
/usr/share/doc/fsa/examples/tRNA.aln1.reference.stock
/usr/share/doc/fsa/examples/tRNA.aln1.stock
/usr/share/doc/fsa/examples/U5.aln1.fasta
/usr/share/doc/fsa/examples/U5.aln1.fasta.gui
/usr/share/doc/fsa/examples/U5.aln1.fasta.probs
/usr/share/doc/fsa/examples/U5.aln1.mfa
/usr/share/doc/fsa/examples/U5.aln1.reference.mfa
/usr/share/doc/fsa/examples/U5.aln1.reference.stock
/usr/share/doc/fsa/examples/U5.aln1.stock
/usr/share/doc/fsa/FAQ.html
/usr/share/doc/fsa/pretty.css
/usr/share/doc/fsa/README.gz
/usr/share/man/man1/fsa.1.gz
/usr/share/man/man1/fsa-translate.1.gz
/usr/share/man/man1/gapcleaner.1.gz
/usr/share/man/man1/isect_mercator_alignment_gff.1.gz
/usr/share/man/man1/map_coords.1.gz
/usr/share/man/man1/map_gff_coords.1.gz
/usr/share/man/man1/percentid.1.gz
/usr/share/man/man1/prot2codon.1.gz
/usr/share/man/man1/slice_fasta.1.gz
/usr/share/man/man1/slice_fasta_gff.1.gz
/usr/share/man/man1/slice_mercator_alignment.1.gz

Field source: Debian 12 (Bookworm) main amd64 revision bookworm-main-amd64:9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5

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Prova Debian 12 (Bookworm) nel browser Crea un'immagine che include fsa

Versioni, suite e repository

Ogni riga è metadato dell'indice pacchetti per una versione, architettura, suite e repository. Nomi, URL e dimensioni arrivano dalla fonte; un link è un punto di recupero mutabile, non una redistribuzione OpenFactory.

Version	Release	Architecture	Repository	Package size	Installed size	Publisher repository artifact
1.15.9+dfsg-6	bookworm / main	amd64	Debian 12 · main · amd64	684 KiB	4.2 MiB	pool/main/f/fsa/fsa_1.15.9+dfsg-6_amd64.deb
1.15.9+dfsg-6	bookworm / main	arm64	Debian 12 · main · arm64	580 KiB	3.7 MiB	pool/main/f/fsa/fsa_1.15.9+dfsg-6_arm64.deb

Field source: Debian 12 (Bookworm) main amd64 revision bookworm-main-amd64:9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5

Checksum e date di osservazione

For an APT source, signature verification authenticates the repository metadata chain and the Packages index containing this source-reported artifact digest. It does not certify package safety.

1.15.9+dfsg-6 / amd64Observed Sep 1, 2026 to Sep 1, 2026

Verification status: Metadata observed; artifact bytes were not independently fetched or hashed by this catalog import. The digest below is source-reported.

Source-reported sha256: fe5b2aa4210ef3a1e676108a160416106354054310d47c01d8262fefb6255bb3

After downloading that exact artifact, compare its bytes with the source-reported expected digest:

printf '%s  %s\n' 'fe5b2aa4210ef3a1e676108a160416106354054310d47c01d8262fefb6255bb3' 'fsa_1.15.9+dfsg-6_amd64.deb' | sha256sum --check --strict -

A match establishes equality with the repository metadata value. It does not establish safety or catalog-side artifact retrieval.

Field source: Debian 12 (Bookworm) main amd64 revision bookworm-main-amd64:9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5

1.15.9+dfsg-6 / arm64Observed Sep 1, 2026 to Sep 1, 2026

Verification status: Metadata observed; artifact bytes were not independently fetched or hashed by this catalog import. The digest below is source-reported.

Source-reported sha256: 0642c02e8d8526e966c1269727398a9980c2c91ee409b1b4f8fe5b6eb380e163

After downloading that exact artifact, compare its bytes with the source-reported expected digest:

printf '%s  %s\n' '0642c02e8d8526e966c1269727398a9980c2c91ee409b1b4f8fe5b6eb380e163' 'fsa_1.15.9+dfsg-6_arm64.deb' | sha256sum --check --strict -

A match establishes equality with the repository metadata value. It does not establish safety or catalog-side artifact retrieval.

Field source: Debian 12 (Bookworm) main arm64 revision bookworm-main-arm64:2ddb1737692e8c45c53e8d57c0ce4cd21c78c5703b830c3226b1423566a06c00

Completezza del record

The completeness score measures metadata coverage, not software quality, security, compatibility, or suitability.

Summary and description: 25/25
Artifact path and source digest: 25/25
Dependency metadata: 15/15
Package-file index: 15/15
Homepage: 5/5
License text: 0/5
Source package or maintainer: 10/10

Recorded total: 95/100

Field source: Debian 12 (Bookworm) main amd64 revision bookworm-main-amd64:9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5, Debian 12 (Bookworm) main arm64 revision bookworm-main-arm64:2ddb1737692e8c45c53e8d57c0ce4cd21c78c5703b830c3226b1423566a06c00. The cross-OS mapping is catalog-derived from the source-reported homepage; it does not establish authorship or publisher identity

Fonti e provenienza

Field-source links above resolve here. Each source entry names the metadata publisher, trust tier, exact snapshot revision, signature result, and observation time; catalog-derived mappings are labeled separately.

Debian 12 (Bookworm) main amd64Sep 1, 2026
Authoritative source; repository metadata signature verified, revision bookworm-main-amd64:9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5
Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.
Repository-signature verification record
Signed object
https://deb.debian.org/debian/dists/bookworm/InRelease
Signed-object SHA-256
77737fa4b34f2693e982cc9ee35736816c35a7778fc2d326cc1bbf5b301fe1aa
Signer fingerprint
4CB50190207B4758A3F73A796ED0E7B82643E131
Keyring revision
debian-archive-keyring.gpg
SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
Tool and policy
gpgv (GnuPG) 2.4.9
openfactory-software-catalog-signature-v1
Verification time
Sep 1, 2026
Signed Release → package-index hash linkage
Path: main/binary-amd64/Packages.xz
Expected SHA-256: 9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5
Observed SHA-256: 9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5
Result: match verified
Debian 12 (Bookworm) main arm64Sep 1, 2026
Authoritative source; repository metadata signature verified, revision bookworm-main-arm64:2ddb1737692e8c45c53e8d57c0ce4cd21c78c5703b830c3226b1423566a06c00
Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.
Repository-signature verification record
Signed object
https://deb.debian.org/debian/dists/bookworm/InRelease
Signed-object SHA-256
77737fa4b34f2693e982cc9ee35736816c35a7778fc2d326cc1bbf5b301fe1aa
Signer fingerprint
4CB50190207B4758A3F73A796ED0E7B82643E131
Keyring revision
debian-archive-keyring.gpg
SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
Tool and policy
gpgv (GnuPG) 2.4.9
openfactory-software-catalog-signature-v1
Verification time
Sep 1, 2026
Signed Release → package-index hash linkage
Path: main/binary-arm64/Packages.xz
Expected SHA-256: 2ddb1737692e8c45c53e8d57c0ce4cd21c78c5703b830c3226b1423566a06c00
Observed SHA-256: 2ddb1737692e8c45c53e8d57c0ce4cd21c78c5703b830c3226b1423566a06c00
Result: match verified