Linux workstation

Debian 13 (Trixie) native package

hmmer2

profile hidden Markov models for protein sequence analysis

Packages / Debian 13 (Trixie) / science / hmmer2

[Source: hmmer2]

Package: hmmer2

Maintainers:

Debian Med Packaging Team

External Resources:

Homepage: [hmmer.janelia.org]

Similar packages:

  • [hmmer2-doc]

    profile hidden Markov models for protein sequence analysis (docs)

  • [libhmmer2-dev]

    profile hidden Markov models for protein sequence analysis (devel)

profile hidden Markov models for protein sequence analysis

Nessun record pubblicato corrisponde a questo filtro di suite e architettura.

Percorsi file del pacchetto (74)

Paths come from the repository package-file index for the observed builds. They describe archive/package associations, not every file that will exist on a running system after maintainer scripts, alternatives, generated state, diversions, or installation choices.

  • /usr/bin/hmm2align
  • /usr/bin/hmm2build
  • /usr/bin/hmm2calibrate
  • /usr/bin/hmm2convert
  • /usr/bin/hmm2emit
  • /usr/bin/hmm2fetch
  • /usr/bin/hmm2index
  • /usr/bin/hmm2pfam
  • /usr/bin/hmm2search
  • /usr/lib/hmmer2/hmmindex
  • /usr/lib/hmmer2/hmmpfam
  • /usr/share/doc/hmmer2/00README
  • /usr/share/doc/hmmer2/changelog.Debian.amd64.gz
  • /usr/share/doc/hmmer2/changelog.Debian.arm64.gz
  • /usr/share/doc/hmmer2/changelog.Debian.gz
  • /usr/share/doc/hmmer2/changelog.gz
  • /usr/share/doc/hmmer2/copyright
  • /usr/share/doc/hmmer2/examples/alignalign_test.c
  • /usr/share/doc/hmmer2/examples/evd_test.c
  • /usr/share/doc/hmmer2/examples/exercises-pvm.sqc
  • /usr/share/doc/hmmer2/examples/exercises.sqc
  • /usr/share/doc/hmmer2/examples/exercises-threaded.sqc
  • /usr/share/doc/hmmer2/examples/fitting_test.c
  • /usr/share/doc/hmmer2/examples/fn3-bin
  • /usr/share/doc/hmmer2/examples/fn3-bin-swap
  • /usr/share/doc/hmmer2/examples/fn3.hmm
  • /usr/share/doc/hmmer2/examples/fn3.seed
  • /usr/share/doc/hmmer2/examples/Makefile
  • /usr/share/doc/hmmer2/examples/Makefile.in
  • /usr/share/doc/hmmer2/examples/masks_test.c
  • /usr/share/doc/hmmer2/examples/Optiontests.fa
  • /usr/share/doc/hmmer2/examples/Optiontests.nfa
  • /usr/share/doc/hmmer2/examples/Optiontests.nslx
  • /usr/share/doc/hmmer2/examples/Optiontests.pam
  • /usr/share/doc/hmmer2/examples/Optiontests.pri
  • /usr/share/doc/hmmer2/examples/Optiontests.slx
  • /usr/share/doc/hmmer2/examples/Optiontests.sto
  • /usr/share/doc/hmmer2/examples/parsingviterbi_test.c
  • /usr/share/doc/hmmer2/examples/README
  • /usr/share/doc/hmmer2/examples/sqc
  • /usr/share/doc/hmmer2/examples/test1-conversion.pl
  • /usr/share/doc/hmmer2/examples/titin.fa
  • /usr/share/doc/hmmer2/examples/tophits_test.c
  • /usr/share/doc/hmmer2/examples/trace_test.c
  • /usr/share/doc/hmmer2/examples/trace_test.hmm
  • /usr/share/doc/hmmer2/examples/trace_test.seq
  • /usr/share/doc/hmmer2/examples/trace_test.slx
  • /usr/share/doc/hmmer2/examples/tutorial/amino.null
  • /usr/share/doc/hmmer2/examples/tutorial/amino.pri
  • /usr/share/doc/hmmer2/examples/tutorial/Artemia.fa
  • /usr/share/doc/hmmer2/examples/tutorial/fn3.sto
  • /usr/share/doc/hmmer2/examples/tutorial/globins50.msf
  • /usr/share/doc/hmmer2/examples/tutorial/globins630.fa
  • /usr/share/doc/hmmer2/examples/tutorial/nucleic.null
  • /usr/share/doc/hmmer2/examples/tutorial/nucleic.pri
  • /usr/share/doc/hmmer2/examples/tutorial/pkinase.sto
  • /usr/share/doc/hmmer2/examples/tutorial/rrm.hmm
  • /usr/share/doc/hmmer2/examples/tutorial/rrm.sto
  • /usr/share/doc/hmmer2/examples/viterbi_exercise.c
  • /usr/share/doc/hmmer2/examples/weeviterbi_test.c
  • /usr/share/doc/hmmer2/examples/weeviterbi_test.hmm
  • /usr/share/doc/hmmer2/examples/weeviterbi_test.seq
  • /usr/share/doc/hmmer2/NOTES.gz
  • /usr/share/doc/hmmer2/README.Debian
  • /usr/share/man/man1/hmm2align.1.gz
  • /usr/share/man/man1/hmm2build.1.gz
  • /usr/share/man/man1/hmm2calibrate.1.gz
  • /usr/share/man/man1/hmm2convert.1.gz
  • /usr/share/man/man1/hmm2emit.1.gz
  • /usr/share/man/man1/hmm2fetch.1.gz
  • /usr/share/man/man1/hmm2index.1.gz
  • /usr/share/man/man1/hmm2pfam.1.gz
  • /usr/share/man/man1/hmm2search.1.gz
  • /usr/share/man/man1/hmmer2.1.gz

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Versioni, suite e repository

Ogni riga è metadato dell'indice pacchetti per una versione, architettura, suite e repository. Nomi, URL e dimensioni arrivano dalla fonte; un link è un punto di recupero mutabile, non una redistribuzione OpenFactory.

Nessun record pubblicato corrisponde a questo filtro di suite e architettura.

Checksum e date di osservazione

For an APT source, signature verification authenticates the repository metadata chain and the Packages index containing this source-reported artifact digest. It does not certify package safety.

Completezza del record

The completeness score measures metadata coverage, not software quality, security, compatibility, or suitability.

Summary and description
25/25
Artifact path and source digest
25/25
Dependency metadata
15/15
Package-file index
15/15
Homepage
5/5
License text
0/5
Source package or maintainer
10/10

Recorded total: 95/100

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3, Debian 13 (Trixie) main arm64 revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908. The cross-OS mapping is catalog-derived from the source-reported homepage; it does not establish authorship or publisher identity

Fonti e provenienza

Field-source links above resolve here. Each source entry names the metadata publisher, trust tier, exact snapshot revision, signature result, and observation time; catalog-derived mappings are labeled separately.

  • Authoritative source; repository metadata signature verified, revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3

    Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.

    Repository-signature verification record
    Signed-object SHA-256
    98b25b5cd185c59d34aa6e4c3e9b5b8f01bbe9d104fe2dcfbcd30dc0a14a59ed
    Signer fingerprint
    4CB50190207B4758A3F73A796ED0E7B82643E131
    Keyring revision
    debian-archive-keyring.gpg
    SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
    Tool and policy
    gpgv (GnuPG) 2.4.9
    openfactory-software-catalog-signature-v1
    Verification time
    Sep 1, 2026
    Signed Release → package-index hash linkage

    Path: main/binary-amd64/Packages.xz
    Expected SHA-256: 3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
    Observed SHA-256: 3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
    Result: match verified

  • Authoritative source; repository metadata signature verified, revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908

    Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.

    Repository-signature verification record
    Signed-object SHA-256
    98b25b5cd185c59d34aa6e4c3e9b5b8f01bbe9d104fe2dcfbcd30dc0a14a59ed
    Signer fingerprint
    4CB50190207B4758A3F73A796ED0E7B82643E131
    Keyring revision
    debian-archive-keyring.gpg
    SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
    Tool and policy
    gpgv (GnuPG) 2.4.9
    openfactory-software-catalog-signature-v1
    Verification time
    Sep 1, 2026
    Signed Release → package-index hash linkage

    Path: main/binary-arm64/Packages.xz
    Expected SHA-256: 753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908
    Observed SHA-256: 753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908
    Result: match verified

hmmer2 Package for Debian 13 (Trixie) | OpenFactory