Linux workstation

Debian 13 (Trixie) native package

lagan

highly parametrizable pairwise global genome sequence aligner

Packages / Debian 13 (Trixie) / science / lagan

[Source: lagan]

Package: lagan (2.0-10+b2)

Maintainers:

Debian Med Packaging Team

External Resources:

Homepage: [lagan.stanford.edu]

highly parametrizable pairwise global genome sequence aligner

Other Packages Related to lagan:

  • dep: [libc6] (>= 2.38)

    GNU C Library: Shared libraries

  • dep: [libgcc-s1] (>= 3.0)

    GCC support library

  • dep: [libstdc++6] (>= 13.1)

    GNU Standard C++ Library v3

Download lagan

ArchitecturePackage SizeInstalled SizeFiles
amd64180 KiB834 KiB[list of files]
arm64174 KiB1.7 MiB[list of files]

Percorsi file del pacchetto (68)

Paths come from the repository package-file index for the observed builds. They describe archive/package associations, not every file that will exist on a running system after maintainer scripts, alternatives, generated state, diversions, or installation choices.

  • /usr/bin/anal_gloc.pl
  • /usr/bin/anchors
  • /usr/bin/glocal
  • /usr/bin/lagan_chaos
  • /usr/bin/lagan.pl
  • /usr/bin/mlagan
  • /usr/bin/order
  • /usr/bin/prolagan
  • /usr/bin/rechaos.pl
  • /usr/bin/slagan-mfa.pl
  • /usr/bin/slagan.pl
  • /usr/bin/supermap.pl
  • /usr/bin/xmfa2mfa.pl
  • /usr/lib/lagan/anchors
  • /usr/lib/lagan/bin/chaos
  • /usr/lib/lagan/blosum62s.txt
  • /usr/lib/lagan/blosum62.txt
  • /usr/lib/lagan/chaos
  • /usr/lib/lagan/nucmatrix.txt
  • /usr/lib/lagan/rechaos.pl
  • /usr/lib/lagan/utils/bin2bl
  • /usr/lib/lagan/utils/bin2mf
  • /usr/lib/lagan/utils/cextract
  • /usr/lib/lagan/utils/cmerge2.pl
  • /usr/lib/lagan/utils/contigorder
  • /usr/lib/lagan/utils/cstat
  • /usr/lib/lagan/utils/dotplot
  • /usr/lib/lagan/utils/draft.pl
  • /usr/lib/lagan/utils/fa2xfa
  • /usr/lib/lagan/utils/flipchaos.pl
  • /usr/lib/lagan/utils/getbounds
  • /usr/lib/lagan/utils/getcontigpos
  • /usr/lib/lagan/utils/getlength
  • /usr/lib/lagan/utils/getoverlap
  • /usr/lib/lagan/utils/Glue
  • /usr/lib/lagan/utils/mextract.pl
  • /usr/lib/lagan/utils/mf2bin.pl
  • /usr/lib/lagan/utils/mpretty.pl
  • /usr/lib/lagan/utils/mproject.pl
  • /usr/lib/lagan/utils/mrunfile.pl
  • /usr/lib/lagan/utils/mrunpairs.pl
  • /usr/lib/lagan/utils/mrun.pl
  • /usr/lib/lagan/utils/msplit.pl
  • /usr/lib/lagan/utils/mviz.pl
  • /usr/lib/lagan/utils/overlay
  • /usr/lib/lagan/utils/rc
  • /usr/lib/lagan/utils/scorealign
  • /usr/lib/lagan/utils/scorecontigs
  • /usr/lib/lagan/utils/seqmerge
  • /usr/lib/lagan/utils/Utils.pm
  • /usr/share/doc/lagan/changelog.Debian.arm64.gz
  • /usr/share/doc/lagan/changelog.Debian.gz
  • /usr/share/doc/lagan/copyright
  • /usr/share/doc/lagan/examples/sample.fasta
  • /usr/share/doc/lagan/examples/sample.params
  • /usr/share/doc/lagan/examples/test.score
  • /usr/share/doc/lagan/README.chaos.gz
  • /usr/share/doc/lagan/README.Debian
  • /usr/share/doc/lagan/README.FIRST
  • /usr/share/doc/lagan/README.lagan
  • /usr/share/doc/lagan/README.mlagan
  • /usr/share/doc/lagan/README.shuffle
  • /usr/share/doc/lagan/README.test
  • /usr/share/doc/lagan/README.tools.gz
  • /usr/share/doc/lagan/run-mlagan-test
  • /usr/share/doc/lagan/run-unit-test
  • /usr/share/lintian/overrides/lagan
  • /usr/share/man/man1/mlagan.1.gz

Field source: Debian 13 (Trixie) main arm64 revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908

Usa questo pacchetto

OpenFactory può avviare questo sistema operativo in una macchina virtuale del browser, o iniziare una costruzione che include il nome nativo del pacchetto di questo record.

Prova Debian 13 (Trixie) nel browserCrea un'immagine che include lagan

Versioni, suite e repository

Ogni riga è metadato dell'indice pacchetti per una versione, architettura, suite e repository. Nomi, URL e dimensioni arrivano dalla fonte; un link è un punto di recupero mutabile, non una redistribuzione OpenFactory.

VersionReleaseArchitectureRepositoryPackage sizeInstalled sizePublisher repository artifact
2.0-10+b2trixie / mainarm64Debian 13 · main · arm64174 KiB1.7 MiBpool/main/l/lagan/lagan_2.0-10+b2_arm64.deb
2.0-10trixie / mainamd64Debian 13 · main · amd64180 KiB834 KiBpool/main/l/lagan/lagan_2.0-10_amd64.deb

Field source: Debian 13 (Trixie) main arm64 revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908

Checksum e date di osservazione

For an APT source, signature verification authenticates the repository metadata chain and the Packages index containing this source-reported artifact digest. It does not certify package safety.

2.0-10+b2 / arm64Observed Sep 1, 2026 to Sep 1, 2026

Verification status: Metadata observed; artifact bytes were not independently fetched or hashed by this catalog import. The digest below is source-reported.

Source-reported sha256: cab77f91222d12c656b8a517ecd76d0ad11abbd38222d8eeafd78da2e72c1c95

After downloading that exact artifact, compare its bytes with the source-reported expected digest:

printf '%s %s\n' 'cab77f91222d12c656b8a517ecd76d0ad11abbd38222d8eeafd78da2e72c1c95' 'lagan_2.0-10+b2_arm64.deb' | sha256sum --check --strict -

A match establishes equality with the repository metadata value. It does not establish safety or catalog-side artifact retrieval.

Field source: Debian 13 (Trixie) main arm64 revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908

2.0-10 / amd64Observed Sep 1, 2026 to Sep 1, 2026

Verification status: Metadata observed; artifact bytes were not independently fetched or hashed by this catalog import. The digest below is source-reported.

Source-reported sha256: ee880599ad007934eb3a58768ce064838e3c416ab045b909436a618c0f2686c8

After downloading that exact artifact, compare its bytes with the source-reported expected digest:

printf '%s %s\n' 'ee880599ad007934eb3a58768ce064838e3c416ab045b909436a618c0f2686c8' 'lagan_2.0-10_amd64.deb' | sha256sum --check --strict -

A match establishes equality with the repository metadata value. It does not establish safety or catalog-side artifact retrieval.

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3

Completezza del record

The completeness score measures metadata coverage, not software quality, security, compatibility, or suitability.

Summary and description
25/25
Artifact path and source digest
25/25
Dependency metadata
15/15
Package-file index
15/15
Homepage
5/5
License text
0/5
Source package or maintainer
10/10

Recorded total: 95/100

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3, Debian 13 (Trixie) main arm64 revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908. The cross-OS mapping is catalog-derived from the source-reported homepage; it does not establish authorship or publisher identity

Fonti e provenienza

Field-source links above resolve here. Each source entry names the metadata publisher, trust tier, exact snapshot revision, signature result, and observation time; catalog-derived mappings are labeled separately.

  • Debian 13 (Trixie) main amd64Sep 1, 2026

    Authoritative source; repository metadata signature verified, revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3

    Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.

    Repository-signature verification record
    Signed-object SHA-256
    98b25b5cd185c59d34aa6e4c3e9b5b8f01bbe9d104fe2dcfbcd30dc0a14a59ed
    Signer fingerprint
    4CB50190207B4758A3F73A796ED0E7B82643E131
    Keyring revision
    debian-archive-keyring.gpg
    SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
    Tool and policy
    gpgv (GnuPG) 2.4.9
    openfactory-software-catalog-signature-v1
    Verification time
    Sep 1, 2026
    Signed Release → package-index hash linkage

    Path: main/binary-amd64/Packages.xz
    Expected SHA-256: 3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
    Observed SHA-256: 3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
    Result: match verified

  • Debian 13 (Trixie) main arm64Sep 1, 2026

    Authoritative source; repository metadata signature verified, revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908

    Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.

    Repository-signature verification record
    Signed-object SHA-256
    98b25b5cd185c59d34aa6e4c3e9b5b8f01bbe9d104fe2dcfbcd30dc0a14a59ed
    Signer fingerprint
    4CB50190207B4758A3F73A796ED0E7B82643E131
    Keyring revision
    debian-archive-keyring.gpg
    SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
    Tool and policy
    gpgv (GnuPG) 2.4.9
    openfactory-software-catalog-signature-v1
    Verification time
    Sep 1, 2026
    Signed Release → package-index hash linkage

    Path: main/binary-arm64/Packages.xz
    Expected SHA-256: 753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908
    Observed SHA-256: 753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908
    Result: match verified

lagan Package for Debian 13 (Trixie) | OpenFactory