Debian 13 (Trixie) native package

ont-fast5-api

simple interface to HDF5 files of the Oxford Nanopore .fast5 file format

Packages / Debian 13 (Trixie) / science / ont-fast5-api

[Source: ont-fast5-api]

Package: ont-fast5-api (4.1.3+dfsg-1+b1)

Maintainers:

Debian Med Packaging Team

External Resources:

Homepage: [github.com]

simple interface to HDF5 files of the Oxford Nanopore .fast5 file format

Other Packages Related to ont-fast5-api:

dep: [libc6] (>= 2.14)
GNU C Library: Shared libraries
dep: [libgcc-s1] (>= 3.0)
GCC support library
dep: [libstdc++6] (>= 13.1)
GNU Standard C++ Library v3
dep: [libzstd1] (>= 1.5.5)
fast lossless compression algorithm
dep: [python3] (<< 3.14)
interactive high-level object-oriented language (default python3 version)
dep: [python3] (>= 3.13~)
interactive high-level object-oriented language (default python3 version)
dep: [python3-h5py] (>= 3)
general-purpose Python interface to hdf5
dep: [python3-numpy]
Python library for numerical computations (Python 3)
dep: [python3-packaging]
core utilities for python3 packages
dep: [python3-pkg-resources]
Package Discovery and Resource Access using pkg_resources
dep: [python3-progressbar]
text progress bar library for Python (Python 3)
dep: [python3] [any]
interactive high-level object-oriented language (default python3 version)
dep: [libvbz-hdf-plugin-dev]
VBZ compression plugin for nanopore signal data (devel)

Download ont-fast5-api

Architecture	Package Size	Installed Size	Files
amd64	50 KiB	258 KiB	[list of files]
arm64	48 KiB	274 KiB	[list of files]

Percorsi file del pacchetto (43)

Paths come from the repository package-file index for the observed builds. They describe archive/package associations, not every file that will exist on a running system after maintainer scripts, alternatives, generated state, diversions, or installation choices.

/usr/bin/check_compression
/usr/bin/compress_fast5
/usr/bin/demux_fast5
/usr/bin/fast5_subset
/usr/bin/multi_to_single_fast5
/usr/bin/single_to_multi_fast5
/usr/lib/python3/dist-packages/ont_fast5_api-4.1.3.egg-info/dependency_links.txt
/usr/lib/python3/dist-packages/ont_fast5_api-4.1.3.egg-info/entry_points.txt
/usr/lib/python3/dist-packages/ont_fast5_api-4.1.3.egg-info/PKG-INFO
/usr/lib/python3/dist-packages/ont_fast5_api-4.1.3.egg-info/requires.txt
/usr/lib/python3/dist-packages/ont_fast5_api-4.1.3.egg-info/top_level.txt
/usr/lib/python3/dist-packages/ont_fast5_api/analysis_tools/alignment.py
/usr/lib/python3/dist-packages/ont_fast5_api/analysis_tools/basecall_1d.py
/usr/lib/python3/dist-packages/ont_fast5_api/analysis_tools/basecall_2d.py
/usr/lib/python3/dist-packages/ont_fast5_api/analysis_tools/base_tool.py
/usr/lib/python3/dist-packages/ont_fast5_api/analysis_tools/event_detection.py
/usr/lib/python3/dist-packages/ont_fast5_api/analysis_tools/__init__.py
/usr/lib/python3/dist-packages/ont_fast5_api/analysis_tools/segmentation.py
/usr/lib/python3/dist-packages/ont_fast5_api/compression_settings.py
/usr/lib/python3/dist-packages/ont_fast5_api/conversion_tools/check_file_compression.py
/usr/lib/python3/dist-packages/ont_fast5_api/conversion_tools/compress_fast5.py
/usr/lib/python3/dist-packages/ont_fast5_api/conversion_tools/conversion_utils.py
/usr/lib/python3/dist-packages/ont_fast5_api/conversion_tools/demux_fast5.py
/usr/lib/python3/dist-packages/ont_fast5_api/conversion_tools/fast5_subset.py
/usr/lib/python3/dist-packages/ont_fast5_api/conversion_tools/__init__.py
/usr/lib/python3/dist-packages/ont_fast5_api/conversion_tools/multi_to_single_fast5.py
/usr/lib/python3/dist-packages/ont_fast5_api/conversion_tools/single_to_multi_fast5.py
/usr/lib/python3/dist-packages/ont_fast5_api/data_sanitisation.py
/usr/lib/python3/dist-packages/ont_fast5_api/fast5_file.py
/usr/lib/python3/dist-packages/ont_fast5_api/fast5_info.py
/usr/lib/python3/dist-packages/ont_fast5_api/fast5_interface.py
/usr/lib/python3/dist-packages/ont_fast5_api/fast5_read.py
/usr/lib/python3/dist-packages/ont_fast5_api/helpers.py
/usr/lib/python3/dist-packages/ont_fast5_api/__init__.py
/usr/lib/python3/dist-packages/ont_fast5_api/multi_fast5.py
/usr/lib/python3/dist-packages/ont_fast5_api/static_data.py
/usr/lib/python3/dist-packages/ont_fast5_api/vbz_plugin/libvbz_hdf_plugin.cpython-313-aarch64-linux-gnu.so
/usr/lib/python3/dist-packages/ont_fast5_api/vbz_plugin/libvbz_hdf_plugin.cpython-313-x86_64-linux-gnu.so
/usr/share/doc/ont-fast5-api/changelog.Debian.amd64.gz
/usr/share/doc/ont-fast5-api/changelog.Debian.arm64.gz
/usr/share/doc/ont-fast5-api/changelog.Debian.gz
/usr/share/doc/ont-fast5-api/changelog.gz
/usr/share/doc/ont-fast5-api/copyright

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3

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Versioni, suite e repository

Ogni riga è metadato dell'indice pacchetti per una versione, architettura, suite e repository. Nomi, URL e dimensioni arrivano dalla fonte; un link è un punto di recupero mutabile, non una redistribuzione OpenFactory.

Version	Release	Architecture	Repository	Package size	Installed size	Publisher repository artifact
4.1.3+dfsg-1+b1	trixie / main	amd64	Debian 13 · main · amd64	50 KiB	258 KiB	pool/main/o/ont-fast5-api/ont-fast5-api_4.1.3+dfsg-1+b1_amd64.deb
4.1.3+dfsg-1+b1	trixie / main	arm64	Debian 13 · main · arm64	48 KiB	274 KiB	pool/main/o/ont-fast5-api/ont-fast5-api_4.1.3+dfsg-1+b1_arm64.deb

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3

Checksum e date di osservazione

For an APT source, signature verification authenticates the repository metadata chain and the Packages index containing this source-reported artifact digest. It does not certify package safety.

4.1.3+dfsg-1+b1 / amd64Observed Sep 1, 2026 to Sep 1, 2026

Verification status: Metadata observed; artifact bytes were not independently fetched or hashed by this catalog import. The digest below is source-reported.

Source-reported sha256: 9ec27fc07064cfa0f97c670b1d030d1072954dd30ba1b43f2eb1cf0a3ddd27c6

After downloading that exact artifact, compare its bytes with the source-reported expected digest:

printf '%s  %s\n' '9ec27fc07064cfa0f97c670b1d030d1072954dd30ba1b43f2eb1cf0a3ddd27c6' 'ont-fast5-api_4.1.3+dfsg-1+b1_amd64.deb' | sha256sum --check --strict -

A match establishes equality with the repository metadata value. It does not establish safety or catalog-side artifact retrieval.

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3

4.1.3+dfsg-1+b1 / arm64Observed Sep 1, 2026 to Sep 1, 2026

Verification status: Metadata observed; artifact bytes were not independently fetched or hashed by this catalog import. The digest below is source-reported.

Source-reported sha256: 86db77282fce36fac4adc1d3e5395b03d93948eec6d3d1e31a6bb1e241554996

After downloading that exact artifact, compare its bytes with the source-reported expected digest:

printf '%s  %s\n' '86db77282fce36fac4adc1d3e5395b03d93948eec6d3d1e31a6bb1e241554996' 'ont-fast5-api_4.1.3+dfsg-1+b1_arm64.deb' | sha256sum --check --strict -

A match establishes equality with the repository metadata value. It does not establish safety or catalog-side artifact retrieval.

Field source: Debian 13 (Trixie) main arm64 revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908

Completezza del record

The completeness score measures metadata coverage, not software quality, security, compatibility, or suitability.

Summary and description: 25/25
Artifact path and source digest: 25/25
Dependency metadata: 15/15
Package-file index: 15/15
Homepage: 5/5
License text: 0/5
Source package or maintainer: 10/10

Recorded total: 95/100

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3, Debian 13 (Trixie) main arm64 revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908. The cross-OS mapping is catalog-derived from the source-reported homepage; it does not establish authorship or publisher identity

Fonti e provenienza

Field-source links above resolve here. Each source entry names the metadata publisher, trust tier, exact snapshot revision, signature result, and observation time; catalog-derived mappings are labeled separately.

Debian 13 (Trixie) main amd64Sep 1, 2026
Authoritative source; repository metadata signature verified, revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.
Repository-signature verification record
Signed object
https://deb.debian.org/debian/dists/trixie/InRelease
Signed-object SHA-256
98b25b5cd185c59d34aa6e4c3e9b5b8f01bbe9d104fe2dcfbcd30dc0a14a59ed
Signer fingerprint
4CB50190207B4758A3F73A796ED0E7B82643E131
Keyring revision
debian-archive-keyring.gpg
SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
Tool and policy
gpgv (GnuPG) 2.4.9
openfactory-software-catalog-signature-v1
Verification time
Sep 1, 2026
Signed Release → package-index hash linkage
Path: main/binary-amd64/Packages.xz
Expected SHA-256: 3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
Observed SHA-256: 3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
Result: match verified
Debian 13 (Trixie) main arm64Sep 1, 2026
Authoritative source; repository metadata signature verified, revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908
Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.
Repository-signature verification record
Signed object
https://deb.debian.org/debian/dists/trixie/InRelease
Signed-object SHA-256
98b25b5cd185c59d34aa6e4c3e9b5b8f01bbe9d104fe2dcfbcd30dc0a14a59ed
Signer fingerprint
4CB50190207B4758A3F73A796ED0E7B82643E131
Keyring revision
debian-archive-keyring.gpg
SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
Tool and policy
gpgv (GnuPG) 2.4.9
openfactory-software-catalog-signature-v1
Verification time
Sep 1, 2026
Signed Release → package-index hash linkage
Path: main/binary-arm64/Packages.xz
Expected SHA-256: 753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908
Observed SHA-256: 753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908
Result: match verified