Debian 13 (Trixie) native package

sift

predicts if a substitution in a protein has a phenotypic effect

Packages / Debian 13 (Trixie) / non-free/science / sift

Package: sift (6.2.1-1)

Maintainers:

Debian Med Packaging Team

External Resources:

Homepage: [sift.bii.a-star.edu.sg]

predicts if a substitution in a protein has a phenotypic effect

Other Packages Related to sift:

dep: [libblimps3] (>= 3.9+ds)
blocks database improved searcher library
dep: [libc6] (>= 2.38)
GNU C Library: Shared libraries
dep: [blimps-utils]
blocks database improved searcher
dep: [csh]
Shell with C-like syntax

Download sift

Architecture	Package Size	Installed Size	Files
amd64	275 KiB	1.8 MiB	[list of files]

Percorsi file del pacchetto (58)

Paths come from the repository package-file index for the observed builds. They describe archive/package associations, not every file that will exist on a running system after maintainer scripts, alternatives, generated state, diversions, or installation choices.

/usr/bin/info_on_seqs
/usr/bin/map_coords_to_bin.pl
/usr/bin/SIFT_exome_nssnvs.pl
/usr/bin/sift_feed_to_chr_coords_batch.pl
/usr/bin/sift_for_submitting_fasta_seq.csh
/usr/bin/SIFT_for_submitting_fasta_seq.csh
/usr/bin/snv_db_engine.pl
/usr/lib/sift/bin/choose_seqs_via_psiblastseedmedian
/usr/lib/sift/bin/clump_output_alignedseq
/usr/lib/sift/bin/consensus_to_seq
/usr/lib/sift/bin/info_on_seqs
/usr/lib/sift/bin/perlscripts/get_BLINK_seq.pl
/usr/lib/sift/bin/perlscripts/separate_query_from_database.pl
/usr/lib/sift/bin/perlscripts/separate_query_from_rest_of_seqs.pl
/usr/lib/sift/bin/psiblast_res_to_fasta_dbpairwise
/usr/lib/sift/bin/seqs_chosen_via_median_info.csh
/usr/lib/sift/bin/seqs_from_psiblast_res
/usr/lib/sift/bin/SIFT_for_submitting_fasta_seq.csh
/usr/lib/sift/bin/SIFT_for_submitting_NCBI_gi_id.csh
/usr/lib/sift/bin/web/allowed_subst_html
/usr/lib/sift/bin/web/process_alignment
/usr/lib/sift/bin/web/seqs_to_matrixweb
/usr/lib/sift/bin/web/seqs_to_msf
/usr/lib/sift/bin/web/seqs_to_msf_web
/usr/share/doc/sift/changelog.Debian.gz
/usr/share/doc/sift/copyright
/usr/share/doc/sift/examples/lacI.alignedfasta
/usr/share/doc/sift/examples/lacI.fasta
/usr/share/doc/sift/examples/lacI.fasta.query.out
/usr/share/doc/sift/examples/lacI.SIFTprediction
/usr/share/doc/sift/examples/lacI.subst
/usr/share/doc/sift/INSTALL.gz
/usr/share/doc/sift/README.Debian
/usr/share/doc/sift/VERSION_UPDATE
/usr/share/man/man1/info_on_seqs.1.gz
/usr/share/man/man1/sift_for_submitting_fasta_seq.csh.1.gz
/usr/share/man/man1/SIFT_for_submitting_fasta_seq.csh.1.gz
/usr/share/sift/blimps/docs/blosum62.bla.new
/usr/share/sift/blimps/docs/coduse.csh
/usr/share/sift/blimps/docs/config.doc
/usr/share/sift/blimps/docs/default.amino.frq
/usr/share/sift/blimps/docs/default.codon.frq
/usr/share/sift/blimps/docs/default.codon.use
/usr/share/sift/blimps/docs/default.consensus.iij
/usr/share/sift/blimps/docs/default.diri
/usr/share/sift/blimps/docs/default.embed.iij
/usr/share/sift/blimps/docs/default.embed.mat
/usr/share/sift/blimps/docs/default.embed.qij
/usr/share/sift/blimps/docs/default.iij
/usr/share/sift/blimps/docs/default.mat
/usr/share/sift/blimps/docs/default.qij
/usr/share/sift/blimps/docs/default.rank
/usr/share/sift/blimps/docs/default.sij
/usr/share/sift/blimps/docs/identity.frq
/usr/share/sift/blimps/docs/Makefile.am
/usr/share/sift/blimps/docs/Makefile.in
/usr/share/sift/blimps/docs/skiplist.doc
/usr/share/sift/blimps/docs/sl-functions.doc

Field source: Debian 13 (Trixie) non-free amd64 revision trixie-non-free-amd64:873a1152a9641bbbd32ae06d9bea40c0eb9486caeea340a786d4ab84cb6de6c5

Usa questo pacchetto

OpenFactory può avviare questo sistema operativo in una macchina virtuale del browser, o iniziare una costruzione che include il nome nativo del pacchetto di questo record.

Prova Debian 13 (Trixie) nel browser Crea un'immagine che include sift

Versioni, suite e repository

Ogni riga è metadato dell'indice pacchetti per una versione, architettura, suite e repository. Nomi, URL e dimensioni arrivano dalla fonte; un link è un punto di recupero mutabile, non una redistribuzione OpenFactory.

Version	Release	Architecture	Repository	Package size	Installed size	Publisher repository artifact
6.2.1-1	trixie / non-free	amd64	Debian 13 · non-free · amd64	275 KiB	1.8 MiB	pool/non-free/s/sift/sift_6.2.1-1_amd64.deb

Field source: Debian 13 (Trixie) non-free amd64 revision trixie-non-free-amd64:873a1152a9641bbbd32ae06d9bea40c0eb9486caeea340a786d4ab84cb6de6c5

Checksum e date di osservazione

For an APT source, signature verification authenticates the repository metadata chain and the Packages index containing this source-reported artifact digest. It does not certify package safety.

6.2.1-1 / amd64Observed Sep 1, 2026 to Sep 1, 2026

Verification status: Metadata observed; artifact bytes were not independently fetched or hashed by this catalog import. The digest below is source-reported.

Source-reported sha256: c914153fd8ed184420734307b29e9e04214f4b72eae8efd2f7982f485be6b09b

After downloading that exact artifact, compare its bytes with the source-reported expected digest:

printf '%s  %s\n' 'c914153fd8ed184420734307b29e9e04214f4b72eae8efd2f7982f485be6b09b' 'sift_6.2.1-1_amd64.deb' | sha256sum --check --strict -

A match establishes equality with the repository metadata value. It does not establish safety or catalog-side artifact retrieval.

Field source: Debian 13 (Trixie) non-free amd64 revision trixie-non-free-amd64:873a1152a9641bbbd32ae06d9bea40c0eb9486caeea340a786d4ab84cb6de6c5

Completezza del record

The completeness score measures metadata coverage, not software quality, security, compatibility, or suitability.

Summary and description: 25/25
Artifact path and source digest: 25/25
Dependency metadata: 15/15
Package-file index: 15/15
Homepage: 5/5
License text: 0/5
Source package or maintainer: 10/10

Recorded total: 95/100

Field source: Debian 13 (Trixie) non-free amd64 revision trixie-non-free-amd64:873a1152a9641bbbd32ae06d9bea40c0eb9486caeea340a786d4ab84cb6de6c5. The cross-OS mapping is catalog-derived from the source-reported homepage; it does not establish authorship or publisher identity

Fonti e provenienza

Field-source links above resolve here. Each source entry names the metadata publisher, trust tier, exact snapshot revision, signature result, and observation time; catalog-derived mappings are labeled separately.

Debian 13 (Trixie) non-free amd64Sep 1, 2026
Authoritative source; repository metadata signature verified, revision trixie-non-free-amd64:873a1152a9641bbbd32ae06d9bea40c0eb9486caeea340a786d4ab84cb6de6c5
Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.
Repository-signature verification record
Signed object
https://deb.debian.org/debian/dists/trixie/InRelease
Signed-object SHA-256
98b25b5cd185c59d34aa6e4c3e9b5b8f01bbe9d104fe2dcfbcd30dc0a14a59ed
Signer fingerprint
4CB50190207B4758A3F73A796ED0E7B82643E131
Keyring revision
debian-archive-keyring.gpg
SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
Tool and policy
gpgv (GnuPG) 2.4.9
openfactory-software-catalog-signature-v1
Verification time
Sep 1, 2026
Signed Release → package-index hash linkage
Path: non-free/binary-amd64/Packages.xz
Expected SHA-256: 873a1152a9641bbbd32ae06d9bea40c0eb9486caeea340a786d4ab84cb6de6c5
Observed SHA-256: 873a1152a9641bbbd32ae06d9bea40c0eb9486caeea340a786d4ab84cb6de6c5
Result: match verified