Debian 13 (Trixie) native package

unicycler

hybrid assembly pipeline for bacterial genomes

Packages / Debian 13 (Trixie) / science / unicycler

Package: unicycler (0.5.1+dfsg-3)

Maintainers:

Debian Med Packaging Team

External Resources:

Homepage: [github.com]

hybrid assembly pipeline for bacterial genomes

Other Packages Related to unicycler:

dep: [python3] (>= 3~)
interactive high-level object-oriented language (default python3 version)
dep: [python3] [any]
interactive high-level object-oriented language (default python3 version)
dep: [libc6] (>= 2.38)
GNU C Library: Shared libraries
dep: [libgcc-s1] (>= 3.0)
GCC support library
dep: [libstdc++6] (>= 13.1)
GNU Standard C++ Library v3
dep: [zlib1g] (>= 1:1.1.4)
compression library - runtime
dep: [default-jre]
Standard Java or Java compatible Runtime
dep: [bcftools]
genomic variant calling and manipulation of VCF/BCF files
dep: [bowtie2]
ultrafast memory-efficient short read aligner
dep: [miniasm]
ultrafast de novo assembler for long noisy DNA sequencing reads
dep: [ncbi-blast+]
next generation suite of BLAST sequence search tools
dep: [pilon]
automated genome assembly improvement and variant detection tool
dep: [racon]
consensus module for raw de novo DNA assembly of long uncorrected reads
dep: [samtools]
processing sequence alignments in SAM, BAM and CRAM formats
dep: [spades] (>= 3.14)
genome assembler for single-cell and isolates data sets

rec: [unicycler-data]
hybrid assembly pipeline for bacterial genomes (data package)

Download unicycler

Architecture	Package Size	Installed Size	Files
amd64	878 KiB	3.1 MiB	[list of files]

Percorsi file del pacchetto (43)

Paths come from the repository package-file index for the observed builds. They describe archive/package associations, not every file that will exist on a running system after maintainer scripts, alternatives, generated state, diversions, or installation choices.

/usr/bin/unicycler
/usr/lib/python3/dist-packages/unicycler-0.5.1.egg-info/dependency_links.txt
/usr/lib/python3/dist-packages/unicycler-0.5.1.egg-info/entry_points.txt
/usr/lib/python3/dist-packages/unicycler-0.5.1.egg-info/not-zip-safe
/usr/lib/python3/dist-packages/unicycler-0.5.1.egg-info/PKG-INFO
/usr/lib/python3/dist-packages/unicycler-0.5.1.egg-info/top_level.txt
/usr/lib/python3/dist-packages/unicycler/alignment.py
/usr/lib/python3/dist-packages/unicycler/assembly_graph_copy_depth.py
/usr/lib/python3/dist-packages/unicycler/assembly_graph.py
/usr/lib/python3/dist-packages/unicycler/assembly_graph_segment.py
/usr/lib/python3/dist-packages/unicycler/blast_func.py
/usr/lib/python3/dist-packages/unicycler/bridge_common.py
/usr/lib/python3/dist-packages/unicycler/bridge_long_read.py
/usr/lib/python3/dist-packages/unicycler/bridge_long_read_simple.py
/usr/lib/python3/dist-packages/unicycler/bridge_loop_unroll.py
/usr/lib/python3/dist-packages/unicycler/bridge_miniasm.py
/usr/lib/python3/dist-packages/unicycler/bridge_spades_contig.py
/usr/lib/python3/dist-packages/unicycler/cpp_functions.so
/usr/lib/python3/dist-packages/unicycler/cpp_wrappers.py
/usr/lib/python3/dist-packages/unicycler/gene_data/lambda_phage.fasta
/usr/lib/python3/dist-packages/unicycler/gene_data/start_genes.fasta
/usr/lib/python3/dist-packages/unicycler/__init__.py
/usr/lib/python3/dist-packages/unicycler/log.py
/usr/lib/python3/dist-packages/unicycler/miniasm_assembly.py
/usr/lib/python3/dist-packages/unicycler/minimap_alignment.py
/usr/lib/python3/dist-packages/unicycler/misc.py
/usr/lib/python3/dist-packages/unicycler/path_finding.py
/usr/lib/python3/dist-packages/unicycler/read_ref.py
/usr/lib/python3/dist-packages/unicycler/settings.py
/usr/lib/python3/dist-packages/unicycler/spades_func.py
/usr/lib/python3/dist-packages/unicycler/string_graph.py
/usr/lib/python3/dist-packages/unicycler/unicycler_align.py
/usr/lib/python3/dist-packages/unicycler/unicycler.py
/usr/lib/python3/dist-packages/unicycler/version.py
/usr/share/doc/unicycler/changelog.Debian.gz
/usr/share/doc/unicycler/copyright
/usr/share/doc/unicycler/README.test
/usr/share/doc/unicycler/run-unit-test
/usr/share/man/man1/unicycler.1.gz
/usr/share/man/man1/unicycler_align.1.gz
/usr/share/man/man1/unicycler_check.1.gz
/usr/share/man/man1/unicycler_polish.1.gz
/usr/share/man/man1/unicycler_scrub.1.gz

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3

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Prova Debian 13 (Trixie) nel browser Crea un'immagine che include unicycler

Versioni, suite e repository

Ogni riga è metadato dell'indice pacchetti per una versione, architettura, suite e repository. Nomi, URL e dimensioni arrivano dalla fonte; un link è un punto di recupero mutabile, non una redistribuzione OpenFactory.

Version	Release	Architecture	Repository	Package size	Installed size	Publisher repository artifact
0.5.1+dfsg-3	trixie / main	amd64	Debian 13 · main · amd64	878 KiB	3.1 MiB	pool/main/u/unicycler/unicycler_0.5.1+dfsg-3_amd64.deb

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3

Checksum e date di osservazione

For an APT source, signature verification authenticates the repository metadata chain and the Packages index containing this source-reported artifact digest. It does not certify package safety.

0.5.1+dfsg-3 / amd64Observed Sep 1, 2026 to Sep 1, 2026

Verification status: Metadata observed; artifact bytes were not independently fetched or hashed by this catalog import. The digest below is source-reported.

Source-reported sha256: efa4634a03649128c087f9588d2a0aedd1591fc154328c4ac884597b0cd8e9ac

After downloading that exact artifact, compare its bytes with the source-reported expected digest:

printf '%s  %s\n' 'efa4634a03649128c087f9588d2a0aedd1591fc154328c4ac884597b0cd8e9ac' 'unicycler_0.5.1+dfsg-3_amd64.deb' | sha256sum --check --strict -

A match establishes equality with the repository metadata value. It does not establish safety or catalog-side artifact retrieval.

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3

Completezza del record

The completeness score measures metadata coverage, not software quality, security, compatibility, or suitability.

Summary and description: 25/25
Artifact path and source digest: 25/25
Dependency metadata: 15/15
Package-file index: 15/15
Homepage: 5/5
License text: 0/5
Source package or maintainer: 10/10

Recorded total: 95/100

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3. The cross-OS mapping is catalog-derived from the source-reported homepage; it does not establish authorship or publisher identity

Fonti e provenienza

Field-source links above resolve here. Each source entry names the metadata publisher, trust tier, exact snapshot revision, signature result, and observation time; catalog-derived mappings are labeled separately.

Debian 13 (Trixie) main amd64Sep 1, 2026
Authoritative source; repository metadata signature verified, revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.
Repository-signature verification record
Signed object
https://deb.debian.org/debian/dists/trixie/InRelease
Signed-object SHA-256
98b25b5cd185c59d34aa6e4c3e9b5b8f01bbe9d104fe2dcfbcd30dc0a14a59ed
Signer fingerprint
4CB50190207B4758A3F73A796ED0E7B82643E131
Keyring revision
debian-archive-keyring.gpg
SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
Tool and policy
gpgv (GnuPG) 2.4.9
openfactory-software-catalog-signature-v1
Verification time
Sep 1, 2026
Signed Release → package-index hash linkage
Path: main/binary-amd64/Packages.xz
Expected SHA-256: 3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
Observed SHA-256: 3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
Result: match verified