Debian 12 (Bookworm) native package

busco

benchmarking sets of universal single-copy orthologs

Packages / Debian 12 (Bookworm) / science / busco

Package: busco (5.4.4-1)

Maintainers:

Debian Med Packaging Team

External Resources:

Homepage: [gitlab.com]

benchmarking sets of universal single-copy orthologs

Other Packages Related to busco:

dep: [python3] [any]
interactive high-level object-oriented language (default python3 version)
dep: [python3-pandas]
data structures for "relational" or "labeled" data
dep: [python3-biopython]
Python3 library for bioinformatics
dep: [hmmer]
profile hidden Markov models for protein sequence analysis
dep: [prodigal]
Microbial (bacterial and archaeal) gene finding program
dep: [bbmap]
BBTools genomic aligner and other tools for short sequences

Download busco

Architecture	Package Size	Installed Size	Files
amd64	70 KiB	410 KiB	[list of files]

Package file paths (37)

Paths come from the repository package-file index for the observed builds. They describe archive/package associations, not every file that will exist on a running system after maintainer scripts, alternatives, generated state, diversions, or installation choices.

/usr/bin/busco
/usr/lib/python3/dist-packages/BUSCO-5.4.4.egg-info/dependency_links.txt
/usr/lib/python3/dist-packages/BUSCO-5.4.4.egg-info/PKG-INFO
/usr/lib/python3/dist-packages/BUSCO-5.4.4.egg-info/top_level.txt
/usr/lib/python3/dist-packages/busco/Actions.py
/usr/lib/python3/dist-packages/busco/analysis/Analysis.py
/usr/lib/python3/dist-packages/busco/analysis/BuscoAnalysis.py
/usr/lib/python3/dist-packages/busco/analysis/GeneSetAnalysis.py
/usr/lib/python3/dist-packages/busco/analysis/GenomeAnalysis.py
/usr/lib/python3/dist-packages/busco/analysis/__init__.py
/usr/lib/python3/dist-packages/busco/analysis/TranscriptomeAnalysis.py
/usr/lib/python3/dist-packages/busco/AutoLineage.py
/usr/lib/python3/dist-packages/busco/BuscoConfig.py
/usr/lib/python3/dist-packages/busco/BuscoDownloadManager.py
/usr/lib/python3/dist-packages/busco/BuscoLogger.py
/usr/lib/python3/dist-packages/busco/BuscoPlacer.py
/usr/lib/python3/dist-packages/busco/BuscoRunner.py
/usr/lib/python3/dist-packages/busco/busco_tools/augustus.py
/usr/lib/python3/dist-packages/busco/busco_tools/base.py
/usr/lib/python3/dist-packages/busco/busco_tools/bbtools.py
/usr/lib/python3/dist-packages/busco/busco_tools/blast.py
/usr/lib/python3/dist-packages/busco/busco_tools/hmmer.py
/usr/lib/python3/dist-packages/busco/busco_tools/__init__.py
/usr/lib/python3/dist-packages/busco/busco_tools/metaeuk.py
/usr/lib/python3/dist-packages/busco/busco_tools/prodigal.py
/usr/lib/python3/dist-packages/busco/busco_tools/sepp.py
/usr/lib/python3/dist-packages/busco/busco_tools/Toolset.py
/usr/lib/python3/dist-packages/busco/ConfigManager.py
/usr/lib/python3/dist-packages/busco/Exceptions.py
/usr/lib/python3/dist-packages/busco/__init__.py
/usr/lib/python3/dist-packages/busco/run_BUSCO.py
/usr/lib/python3/dist-packages/busco/_version.py
/usr/share/doc/busco/changelog.Debian.gz
/usr/share/doc/busco/changelog.gz
/usr/share/doc/busco/copyright
/usr/share/doc/busco/examples/config.ini
/usr/share/man/man1/busco.1.gz

Field source: Debian 12 (Bookworm) main amd64 revision bookworm-main-amd64:9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5

Versions, suites, and repositories

Each row is recorded package-index metadata for one version, architecture, suite, and repository. Names, URLs, and sizes are source-reported; a link is a potentially mutable retrieval location, not an OpenFactory redistribution claim or proof that OpenFactory retained the artifact bytes.

Version	Release	Architecture	Repository	Package size	Installed size	Publisher repository artifact
5.4.4-1	bookworm / main	amd64	Debian 12 · main · amd64	70 KiB	410 KiB	pool/main/b/busco/busco_5.4.4-1_amd64.deb

Field source: Debian 12 (Bookworm) main amd64 revision bookworm-main-amd64:9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5

Checksums and observation dates

For an APT source, signature verification authenticates the repository metadata chain and the Packages index containing this source-reported artifact digest. It does not certify package safety.

5.4.4-1 / amd64Observed Sep 1, 2026 to Sep 1, 2026

Verification status: Metadata observed; artifact bytes were not independently fetched or hashed by this catalog import. The digest below is source-reported.

Source-reported sha256: 98891e95d5baf338c3c14ac530f765c064634118e24d2c89b2c84aad3fe2a536

After downloading that exact artifact, compare its bytes with the source-reported expected digest:

printf '%s  %s\n' '98891e95d5baf338c3c14ac530f765c064634118e24d2c89b2c84aad3fe2a536' 'busco_5.4.4-1_amd64.deb' | sha256sum --check --strict -

A match establishes equality with the repository metadata value. It does not establish safety or catalog-side artifact retrieval.

Field source: Debian 12 (Bookworm) main amd64 revision bookworm-main-amd64:9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5

Catalog record completeness

The completeness score measures metadata coverage, not software quality, security, compatibility, or suitability.

Summary and description: 25/25
Artifact path and source digest: 25/25
Dependency metadata: 15/15
Package-file index: 15/15
Homepage: 5/5
License text: 0/5
Source package or maintainer: 10/10

Recorded total: 95/100

Field source: Debian 12 (Bookworm) main amd64 revision bookworm-main-amd64:9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5. The cross-OS mapping is catalog-derived from the source-reported homepage; it does not establish authorship or publisher identity

Sources and provenance

Field-source links above resolve here. Each source entry names the metadata publisher, trust tier, exact snapshot revision, signature result, and observation time; catalog-derived mappings are labeled separately.

Debian 12 (Bookworm) main amd64Sep 1, 2026
Authoritative source; repository metadata signature verified, revision bookworm-main-amd64:9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5
Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.
Repository-signature verification record
Signed object
https://deb.debian.org/debian/dists/bookworm/InRelease
Signed-object SHA-256
77737fa4b34f2693e982cc9ee35736816c35a7778fc2d326cc1bbf5b301fe1aa
Signer fingerprint
4CB50190207B4758A3F73A796ED0E7B82643E131
Keyring revision
debian-archive-keyring.gpg
SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
Tool and policy
gpgv (GnuPG) 2.4.9
openfactory-software-catalog-signature-v1
Verification time
Sep 1, 2026
Signed Release → package-index hash linkage
Path: main/binary-amd64/Packages.xz
Expected SHA-256: 9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5
Observed SHA-256: 9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5
Result: match verified