Linux workstation

Debian 12 (Bookworm) native package

ea-utils

command-line tools for processing biological sequencing data

Packages / Debian 12 (Bookworm) / science / ea-utils

[Source: ea-utils]

Package: ea-utils (1.1.2+dfsg-9+b2)

Maintainers:

Debian Med Packaging Team

External Resources:

Homepage: [expressionanalysis.github.io]

command-line tools for processing biological sequencing data

Other Packages Related to ea-utils:

  • dep: [libc6] (>= 2.34)

    GNU C Library: Shared libraries

  • dep: [libgcc-s1] (>= 3.0)

    GCC support library

  • dep: [libgsl27] (>= 2.7.1)

    GNU Scientific Library (GSL) -- library package

  • dep: [libstdc++6] (>= 11)

    GNU Standard C++ Library v3

  • dep: [zlib1g] (>= 1:1.2.3.3)

    compression library - runtime

  • dep: [r-base-core]

    GNU R core of statistical computation and graphics system

  • dep: [r-cran-getopt]

    GNU R package providing command-line parsing functionality

  • dep: [r-cran-hmisc]

    GNU R miscellaneous functions by Frank Harrell

  • dep: [r-cran-lattice]

    GNU R package for 'Trellis' graphics

  • dep: [r-cran-survival]

    GNU R package for survival analysis

  • dep: [r-cran-formula]

    GNU R package for extended model formulas

  • dep: [r-cran-ggplot2]

    implementation of the Grammar of Graphics

  • rec: [med-config] (>= 2.1)

    Debian Med general config package

Download ea-utils

ArchitecturePackage SizeInstalled SizeFiles
amd64231 KiB747 KiB[list of files]
arm64209 KiB1003 KiB[list of files]

Package file paths (36)

Paths come from the repository package-file index for the observed builds. They describe archive/package associations, not every file that will exist on a running system after maintainer scripts, alternatives, generated state, diversions, or installation choices.

  • /usr/bin/determine-phred
  • /usr/bin/ea-alc
  • /usr/bin/fastq-clipper
  • /usr/bin/fastq-join
  • /usr/bin/fastq-mcf
  • /usr/bin/fastq-multx
  • /usr/bin/fastq-stats
  • /usr/bin/fastx-graph
  • /usr/bin/randomFQ
  • /usr/bin/sam-stats
  • /usr/bin/varcall
  • /usr/lib/debian-med/bin/alc
  • /usr/lib/debian-med/share/man/man1/alc.1.gz
  • /usr/share/doc/ea-utils/changelog.Debian.amd64.gz
  • /usr/share/doc/ea-utils/changelog.Debian.arm64.gz
  • /usr/share/doc/ea-utils/changelog.Debian.gz
  • /usr/share/doc/ea-utils/changelog.gz
  • /usr/share/doc/ea-utils/copyright
  • /usr/share/doc/ea-utils/examples/adapters.fa
  • /usr/share/doc/ea-utils/examples/data.fastq.gz
  • /usr/share/doc/ea-utils/get-test-data
  • /usr/share/doc/ea-utils/README.Debian
  • /usr/share/doc/ea-utils/README.test
  • /usr/share/doc/ea-utils/run-unit-test
  • /usr/share/doc/ea-utils/TODO.Debian
  • /usr/share/man/man1/determine-phred.1.gz
  • /usr/share/man/man1/ea-alc.1.gz
  • /usr/share/man/man1/fastq-clipper.1.gz
  • /usr/share/man/man1/fastq-join.1.gz
  • /usr/share/man/man1/fastq-mcf.1.gz
  • /usr/share/man/man1/fastq-multx.1.gz
  • /usr/share/man/man1/fastq-stats.1.gz
  • /usr/share/man/man1/fastx-graph.1.gz
  • /usr/share/man/man1/randomFQ.1.gz
  • /usr/share/man/man1/sam-stats.1.gz
  • /usr/share/man/man1/varcall.1.gz

Field source: Debian 12 (Bookworm) main amd64 revision bookworm-main-amd64:9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5

Use this package

OpenFactory can boot this operating system in a browser VM, or start a build that includes the native package name from this record.

Try Debian 12 (Bookworm) in the browserBuild an image that includes ea-utils

Versions, suites, and repositories

Each row is recorded package-index metadata for one version, architecture, suite, and repository. Names, URLs, and sizes are source-reported; a link is a potentially mutable retrieval location, not an OpenFactory redistribution claim or proof that OpenFactory retained the artifact bytes.

VersionReleaseArchitectureRepositoryPackage sizeInstalled sizePublisher repository artifact
1.1.2+dfsg-9+b2bookworm / mainamd64Debian 12 · main · amd64231 KiB747 KiBpool/main/e/ea-utils/ea-utils_1.1.2+dfsg-9+b2_amd64.deb
1.1.2+dfsg-9+b2bookworm / mainarm64Debian 12 · main · arm64209 KiB1003 KiBpool/main/e/ea-utils/ea-utils_1.1.2+dfsg-9+b2_arm64.deb

Field source: Debian 12 (Bookworm) main amd64 revision bookworm-main-amd64:9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5

Checksums and observation dates

For an APT source, signature verification authenticates the repository metadata chain and the Packages index containing this source-reported artifact digest. It does not certify package safety.

1.1.2+dfsg-9+b2 / amd64Observed Sep 1, 2026 to Sep 1, 2026

Verification status: Metadata observed; artifact bytes were not independently fetched or hashed by this catalog import. The digest below is source-reported.

Source-reported sha256: ea31b65ffacf615916dc3886074e31cea8a80a10fba99aa65e71e2102c97b6f5

After downloading that exact artifact, compare its bytes with the source-reported expected digest:

printf '%s %s\n' 'ea31b65ffacf615916dc3886074e31cea8a80a10fba99aa65e71e2102c97b6f5' 'ea-utils_1.1.2+dfsg-9+b2_amd64.deb' | sha256sum --check --strict -

A match establishes equality with the repository metadata value. It does not establish safety or catalog-side artifact retrieval.

Field source: Debian 12 (Bookworm) main amd64 revision bookworm-main-amd64:9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5

1.1.2+dfsg-9+b2 / arm64Observed Sep 1, 2026 to Sep 1, 2026

Verification status: Metadata observed; artifact bytes were not independently fetched or hashed by this catalog import. The digest below is source-reported.

Source-reported sha256: a5224ac75e528d4fefd93c6250f2bd31c81d3eddf9cbceb203b31ec37d975ff9

After downloading that exact artifact, compare its bytes with the source-reported expected digest:

printf '%s %s\n' 'a5224ac75e528d4fefd93c6250f2bd31c81d3eddf9cbceb203b31ec37d975ff9' 'ea-utils_1.1.2+dfsg-9+b2_arm64.deb' | sha256sum --check --strict -

A match establishes equality with the repository metadata value. It does not establish safety or catalog-side artifact retrieval.

Field source: Debian 12 (Bookworm) main arm64 revision bookworm-main-arm64:2ddb1737692e8c45c53e8d57c0ce4cd21c78c5703b830c3226b1423566a06c00

Catalog record completeness

The completeness score measures metadata coverage, not software quality, security, compatibility, or suitability.

Summary and description
25/25
Artifact path and source digest
25/25
Dependency metadata
15/15
Package-file index
15/15
Homepage
5/5
License text
0/5
Source package or maintainer
10/10

Recorded total: 95/100

Field source: Debian 12 (Bookworm) main amd64 revision bookworm-main-amd64:9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5, Debian 12 (Bookworm) main arm64 revision bookworm-main-arm64:2ddb1737692e8c45c53e8d57c0ce4cd21c78c5703b830c3226b1423566a06c00. The cross-OS mapping is catalog-derived from the source-reported homepage; it does not establish authorship or publisher identity

Sources and provenance

Field-source links above resolve here. Each source entry names the metadata publisher, trust tier, exact snapshot revision, signature result, and observation time; catalog-derived mappings are labeled separately.

  • Debian 12 (Bookworm) main amd64Sep 1, 2026

    Authoritative source; repository metadata signature verified, revision bookworm-main-amd64:9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5

    Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.

    Repository-signature verification record
    Signed-object SHA-256
    77737fa4b34f2693e982cc9ee35736816c35a7778fc2d326cc1bbf5b301fe1aa
    Signer fingerprint
    4CB50190207B4758A3F73A796ED0E7B82643E131
    Keyring revision
    debian-archive-keyring.gpg
    SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
    Tool and policy
    gpgv (GnuPG) 2.4.9
    openfactory-software-catalog-signature-v1
    Verification time
    Sep 1, 2026
    Signed Release → package-index hash linkage

    Path: main/binary-amd64/Packages.xz
    Expected SHA-256: 9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5
    Observed SHA-256: 9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5
    Result: match verified

  • Debian 12 (Bookworm) main arm64Sep 1, 2026

    Authoritative source; repository metadata signature verified, revision bookworm-main-arm64:2ddb1737692e8c45c53e8d57c0ce4cd21c78c5703b830c3226b1423566a06c00

    Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.

    Repository-signature verification record
    Signed-object SHA-256
    77737fa4b34f2693e982cc9ee35736816c35a7778fc2d326cc1bbf5b301fe1aa
    Signer fingerprint
    4CB50190207B4758A3F73A796ED0E7B82643E131
    Keyring revision
    debian-archive-keyring.gpg
    SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
    Tool and policy
    gpgv (GnuPG) 2.4.9
    openfactory-software-catalog-signature-v1
    Verification time
    Sep 1, 2026
    Signed Release → package-index hash linkage

    Path: main/binary-arm64/Packages.xz
    Expected SHA-256: 2ddb1737692e8c45c53e8d57c0ce4cd21c78c5703b830c3226b1423566a06c00
    Observed SHA-256: 2ddb1737692e8c45c53e8d57c0ce4cd21c78c5703b830c3226b1423566a06c00
    Result: match verified

ea-utils Package for Debian 12 (Bookworm) | OpenFactory