Debian 12 (Bookworm) native package

kraken

assigning taxonomic labels to short DNA sequences

Packages / Debian 12 (Bookworm) / science / kraken

Package: kraken

Maintainers:

Debian Med Packaging Team

External Resources:

Homepage: [ccb.jhu.edu]

assigning taxonomic labels to short DNA sequences

Жоден опублікований запис не відповідає цьому фільтру набору та архітектури.

Шляхи файлів пакета (67)

Paths come from the repository package-file index for the observed builds. They describe archive/package associations, not every file that will exist on a running system after maintainer scripts, alternatives, generated state, diversions, or installation choices.

/usr/bin/kraken
/usr/bin/kraken-build
/usr/bin/kraken-filter
/usr/bin/kraken-mpa-report
/usr/bin/kraken-report
/usr/bin/kraken-translate
/usr/lib/kraken/add_to_library.sh
/usr/lib/kraken/build_kraken_db.sh
/usr/lib/kraken/check_for_jellyfish.sh
/usr/lib/kraken/classify
/usr/lib/kraken/clean_db.sh
/usr/lib/kraken/convert_gb_to_fa.pl
/usr/lib/kraken/cp_into_tempfile.pl
/usr/lib/kraken/db_shrink
/usr/lib/kraken/db_sort
/usr/lib/kraken/download_genomic_library.sh
/usr/lib/kraken/download_taxonomy.sh
/usr/lib/kraken/kmer_estimator
/usr/lib/kraken/kraken
/usr/lib/kraken/kraken-build
/usr/lib/kraken/kraken-filter
/usr/lib/kraken/krakenlib.pm
/usr/lib/kraken/kraken-mpa-report
/usr/lib/kraken/kraken-report
/usr/lib/kraken/kraken-translate
/usr/lib/kraken/lookup_accession_numbers.pl
/usr/lib/kraken/make_seqid_to_taxid_map
/usr/lib/kraken/read_merger.pl
/usr/lib/kraken/report_gi_numbers.pl
/usr/lib/kraken/rsync_from_ncbi.pl
/usr/lib/kraken/scan_fasta_file.pl
/usr/lib/kraken/set_lcas
/usr/lib/kraken/shrink_db.sh
/usr/lib/kraken/standard_installation.sh
/usr/lib/kraken/upgrade_db.sh
/usr/lib/kraken/verify_gi_numbers.pl
/usr/share/doc-base/kraken.kraken
/usr/share/doc/kraken/changelog.Debian.gz
/usr/share/doc/kraken/changelog.gz
/usr/share/doc/kraken/copyright
/usr/share/doc/kraken/html/bar-bg.png
/usr/share/doc/kraken/html/head.html
/usr/share/doc/kraken/html/index.html
/usr/share/doc/kraken/html/kraken.css
/usr/share/doc/kraken/html/MANUAL.html
/usr/share/doc/kraken/html/top.html
/usr/share/doc/kraken/README.test
/usr/share/doc/kraken/run-unit-test
/usr/share/doc/kraken/test_data/Acartia_tonsa.fasta
/usr/share/doc/kraken/test_data/Acinetobacter_phage.fasta.gz
/usr/share/doc/kraken/test_data/test_db/taxonomy/citation.dmp
/usr/share/doc/kraken/test_data/test_db/taxonomy/delnodes.dmp.gz
/usr/share/doc/kraken/test_data/test_db/taxonomy/division.dmp
/usr/share/doc/kraken/test_data/test_db/taxonomy/gc.prt.gz
/usr/share/doc/kraken/test_data/test_db/taxonomy/gencode.dmp.gz
/usr/share/doc/kraken/test_data/test_db/taxonomy/gi_taxid_nucl.dmp
/usr/share/doc/kraken/test_data/test_db/taxonomy/merged.dmp.gz
/usr/share/doc/kraken/test_data/test_db/taxonomy/names.dmp
/usr/share/doc/kraken/test_data/test_db/taxonomy/nodes.dmp
/usr/share/doc/kraken/test_data/test_db/taxonomy/readme.txt
/usr/share/doc/kraken/test_data/test.fa
/usr/share/man/man1/kraken.1.gz
/usr/share/man/man1/kraken-build.1.gz
/usr/share/man/man1/kraken-filter.1.gz
/usr/share/man/man1/kraken-mpa-report.1.gz
/usr/share/man/man1/kraken-report.1.gz
/usr/share/man/man1/kraken-translate.1.gz

Версії, набори та репозиторії

Кожен рядок: метадані індексу пакетів для однієї версії, архітектури, набору й репозиторію. Назви, URL і розміри зі джерела; посилання є змінним місцем отримання, не перерозповсюдженням OpenFactory.

Жоден опублікований запис не відповідає цьому фільтру набору та архітектури.

Контрольні суми й дати спостереження

For an APT source, signature verification authenticates the repository metadata chain and the Packages index containing this source-reported artifact digest. It does not certify package safety.

Повнота запису каталогу

The completeness score measures metadata coverage, not software quality, security, compatibility, or suitability.

Summary and description: 25/25
Artifact path and source digest: 25/25
Dependency metadata: 15/15
Package-file index: 15/15
Homepage: 5/5
License text: 0/5
Source package or maintainer: 10/10

Recorded total: 95/100

Field source: Debian 12 (Bookworm) main amd64 revision bookworm-main-amd64:9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5, Debian 12 (Bookworm) main arm64 revision bookworm-main-arm64:2ddb1737692e8c45c53e8d57c0ce4cd21c78c5703b830c3226b1423566a06c00. The cross-OS mapping is catalog-derived from the source-reported homepage; it does not establish authorship or publisher identity

Джерела та походження

Field-source links above resolve here. Each source entry names the metadata publisher, trust tier, exact snapshot revision, signature result, and observation time; catalog-derived mappings are labeled separately.

Debian 12 (Bookworm) main amd64Sep 1, 2026
Authoritative source; repository metadata signature verified, revision bookworm-main-amd64:9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5
Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.
Repository-signature verification record
Signed object
https://deb.debian.org/debian/dists/bookworm/InRelease
Signed-object SHA-256
77737fa4b34f2693e982cc9ee35736816c35a7778fc2d326cc1bbf5b301fe1aa
Signer fingerprint
4CB50190207B4758A3F73A796ED0E7B82643E131
Keyring revision
debian-archive-keyring.gpg
SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
Tool and policy
gpgv (GnuPG) 2.4.9
openfactory-software-catalog-signature-v1
Verification time
Sep 1, 2026
Signed Release → package-index hash linkage
Path: main/binary-amd64/Packages.xz
Expected SHA-256: 9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5
Observed SHA-256: 9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5
Result: match verified
Debian 12 (Bookworm) main arm64Sep 1, 2026
Authoritative source; repository metadata signature verified, revision bookworm-main-arm64:2ddb1737692e8c45c53e8d57c0ce4cd21c78c5703b830c3226b1423566a06c00
Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.
Repository-signature verification record
Signed object
https://deb.debian.org/debian/dists/bookworm/InRelease
Signed-object SHA-256
77737fa4b34f2693e982cc9ee35736816c35a7778fc2d326cc1bbf5b301fe1aa
Signer fingerprint
4CB50190207B4758A3F73A796ED0E7B82643E131
Keyring revision
debian-archive-keyring.gpg
SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
Tool and policy
gpgv (GnuPG) 2.4.9
openfactory-software-catalog-signature-v1
Verification time
Sep 1, 2026
Signed Release → package-index hash linkage
Path: main/binary-arm64/Packages.xz
Expected SHA-256: 2ddb1737692e8c45c53e8d57c0ce4cd21c78c5703b830c3226b1423566a06c00
Observed SHA-256: 2ddb1737692e8c45c53e8d57c0ce4cd21c78c5703b830c3226b1423566a06c00
Result: match verified