Linux workstation

Debian 12 (Bookworm) native package

paml

Phylogenetic Analysis by Maximum Likelihood (PAML)

Packages / Debian 12 (Bookworm) / science / paml

Package: paml

Maintainers:

Debian Med Packaging Team

External Resources:

Homepage: [abacus.gene.ucl.ac.uk]

Phylogenetic Analysis by Maximum Likelihood (PAML)

Nessun record pubblicato corrisponde a questo filtro di suite e architettura.

Percorsi file del pacchetto (84)

Paths come from the repository package-file index for the observed builds. They describe archive/package associations, not every file that will exist on a running system after maintainer scripts, alternatives, generated state, diversions, or installation choices.

  • /etc/paml/aaml.ctl
  • /etc/paml/baseml.ctl
  • /etc/paml/codeml.ctl
  • /etc/paml/codonml.ctl
  • /etc/paml/mcmctree.ctl
  • /etc/paml/pamp.ctl
  • /etc/paml/yn00.ctl
  • /usr/bin/baseml
  • /usr/bin/basemlg
  • /usr/bin/chi2
  • /usr/bin/codeml
  • /usr/bin/mcmctree
  • /usr/bin/paml-evolver
  • /usr/bin/pamp
  • /usr/bin/yn00
  • /usr/lib/debian-med/bin/baseml
  • /usr/lib/debian-med/bin/basemlg
  • /usr/lib/debian-med/bin/chi2
  • /usr/lib/debian-med/bin/codeml
  • /usr/lib/debian-med/bin/evolver
  • /usr/lib/debian-med/bin/mcmctree
  • /usr/lib/debian-med/bin/pamp
  • /usr/lib/debian-med/bin/yn00
  • /usr/lib/paml/bin/baseml
  • /usr/lib/paml/bin/basemlg
  • /usr/lib/paml/bin/chi2
  • /usr/lib/paml/bin/codeml
  • /usr/lib/paml/bin/evolver
  • /usr/lib/paml/bin/mcmctree
  • /usr/lib/paml/bin/pamp
  • /usr/lib/paml/bin/yn00
  • /usr/lib/paml/data/3s.trees
  • /usr/lib/paml/data/4s.trees
  • /usr/lib/paml/data/5s.trees
  • /usr/lib/paml/data/6s.trees
  • /usr/lib/paml/data/9s.trees
  • /usr/lib/paml/data/aaml.ctl
  • /usr/lib/paml/data/abglobin.nuc
  • /usr/lib/paml/data/baseml.ctl
  • /usr/lib/paml/data/brown.nuc
  • /usr/lib/paml/data/brown.rooted.trees
  • /usr/lib/paml/data/brown.trees
  • /usr/lib/paml/data/codeml.ctl
  • /usr/lib/paml/data/codonml.ctl
  • /usr/lib/paml/data/dat/cpREV10.dat
  • /usr/lib/paml/data/dat/cpREV64.dat
  • /usr/lib/paml/data/dat/dayhoff.dat
  • /usr/lib/paml/data/dat/dayhoff-dcmut.dat
  • /usr/lib/paml/data/dat/g1974a.dat
  • /usr/lib/paml/data/dat/g1974c.dat
  • /usr/lib/paml/data/dat/g1974p.dat
  • /usr/lib/paml/data/dat/g1974v.dat
  • /usr/lib/paml/data/dat/grantham.dat
  • /usr/lib/paml/data/dat/jones.dat
  • /usr/lib/paml/data/dat/jones-dcmut.dat
  • /usr/lib/paml/data/dat/lg.dat
  • /usr/lib/paml/data/dat/miyata.dat
  • /usr/lib/paml/data/dat/mtArt.dat
  • /usr/lib/paml/data/dat/mtmam.dat
  • /usr/lib/paml/data/dat/mtREV24.dat
  • /usr/lib/paml/data/dat/MtZoa.dat
  • /usr/lib/paml/data/dat/wag.dat
  • /usr/lib/paml/data/lysozymeSmall.nuc
  • /usr/lib/paml/data/lysozymeSmall.trees
  • /usr/lib/paml/data/MCaa.dat
  • /usr/lib/paml/data/MCbase.dat
  • /usr/lib/paml/data/MCbaseRandomTree.dat
  • /usr/lib/paml/data/MCcodon.dat
  • /usr/lib/paml/data/mcmctree.ctl
  • /usr/lib/paml/data/mtCDNApri123.txt
  • /usr/lib/paml/data/mtCDNApri.trees
  • /usr/lib/paml/data/mtprim9.nuc
  • /usr/lib/paml/data/pamp.ctl
  • /usr/lib/paml/data/stewart.aa
  • /usr/lib/paml/data/stewart.trees
  • /usr/lib/paml/data/yn00.ctl
  • /usr/share/doc/paml/changelog.Debian.gz
  • /usr/share/doc/paml/copyright
  • /usr/share/doc/paml/GeneticCode.txt.gz
  • /usr/share/doc/paml/profile.d/paml
  • /usr/share/doc/paml/README.Debian
  • /usr/share/doc/paml/README.test
  • /usr/share/doc/paml/README.txt
  • /usr/share/doc/paml/run-unit-test

Usa questo pacchetto

OpenFactory può avviare questo sistema operativo in una macchina virtuale del browser, o iniziare una costruzione che include il nome nativo del pacchetto di questo record.

Versioni, suite e repository

Ogni riga è metadato dell'indice pacchetti per una versione, architettura, suite e repository. Nomi, URL e dimensioni arrivano dalla fonte; un link è un punto di recupero mutabile, non una redistribuzione OpenFactory.

Nessun record pubblicato corrisponde a questo filtro di suite e architettura.

Checksum e date di osservazione

For an APT source, signature verification authenticates the repository metadata chain and the Packages index containing this source-reported artifact digest. It does not certify package safety.

Completezza del record

The completeness score measures metadata coverage, not software quality, security, compatibility, or suitability.

Summary and description
25/25
Artifact path and source digest
25/25
Dependency metadata
15/15
Package-file index
15/15
Homepage
5/5
License text
0/5
Source package or maintainer
10/10

Recorded total: 95/100

Field source: Debian 12 (Bookworm) main amd64 revision bookworm-main-amd64:9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5, Debian 12 (Bookworm) main arm64 revision bookworm-main-arm64:2ddb1737692e8c45c53e8d57c0ce4cd21c78c5703b830c3226b1423566a06c00. The cross-OS mapping is catalog-derived from the source-reported homepage; it does not establish authorship or publisher identity

Fonti e provenienza

Field-source links above resolve here. Each source entry names the metadata publisher, trust tier, exact snapshot revision, signature result, and observation time; catalog-derived mappings are labeled separately.

  • Authoritative source; repository metadata signature verified, revision bookworm-main-amd64:9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5

    Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.

    Repository-signature verification record
    Signed-object SHA-256
    77737fa4b34f2693e982cc9ee35736816c35a7778fc2d326cc1bbf5b301fe1aa
    Signer fingerprint
    4CB50190207B4758A3F73A796ED0E7B82643E131
    Keyring revision
    debian-archive-keyring.gpg
    SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
    Tool and policy
    gpgv (GnuPG) 2.4.9
    openfactory-software-catalog-signature-v1
    Verification time
    Sep 1, 2026
    Signed Release → package-index hash linkage

    Path: main/binary-amd64/Packages.xz
    Expected SHA-256: 9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5
    Observed SHA-256: 9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5
    Result: match verified

  • Authoritative source; repository metadata signature verified, revision bookworm-main-arm64:2ddb1737692e8c45c53e8d57c0ce4cd21c78c5703b830c3226b1423566a06c00

    Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.

    Repository-signature verification record
    Signed-object SHA-256
    77737fa4b34f2693e982cc9ee35736816c35a7778fc2d326cc1bbf5b301fe1aa
    Signer fingerprint
    4CB50190207B4758A3F73A796ED0E7B82643E131
    Keyring revision
    debian-archive-keyring.gpg
    SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
    Tool and policy
    gpgv (GnuPG) 2.4.9
    openfactory-software-catalog-signature-v1
    Verification time
    Sep 1, 2026
    Signed Release → package-index hash linkage

    Path: main/binary-arm64/Packages.xz
    Expected SHA-256: 2ddb1737692e8c45c53e8d57c0ce4cd21c78c5703b830c3226b1423566a06c00
    Observed SHA-256: 2ddb1737692e8c45c53e8d57c0ce4cd21c78c5703b830c3226b1423566a06c00
    Result: match verified