Debian 12 (Bookworm) native package

parsnp

rapid core genome multi-alignment

Packages / Debian 12 (Bookworm) / science / parsnp

Package: parsnp

Maintainers:

Debian Med Packaging Team

External Resources:

Homepage: [harvest.readthedocs.org]

rapid core genome multi-alignment

Жоден опублікований запис не відповідає цьому фільтру набору та архітектури.

Шляхи файлів пакета (61)

Paths come from the repository package-file index for the observed builds. They describe archive/package associations, not every file that will exist on a running system after maintainer scripts, alternatives, generated state, diversions, or installation choices.

/usr/bin/parsnp
/usr/lib/parsnp/parsnp_core
/usr/lib/python3/dist-packages/parsnp/extend.py
/usr/lib/python3/dist-packages/parsnp/logger.py
/usr/share/doc/parsnp/changelog.Debian.gz
/usr/share/doc/parsnp/copyright
/usr/share/doc/parsnp/examples/mers_virus/genomes/Al-Hasa_1_2013.fna
/usr/share/doc/parsnp/examples/mers_virus/genomes/Al-Hasa_12_2013.fna
/usr/share/doc/parsnp/examples/mers_virus/genomes/Al-Hasa_15_2013.fna
/usr/share/doc/parsnp/examples/mers_virus/genomes/Al-Hasa_16_2013.fna
/usr/share/doc/parsnp/examples/mers_virus/genomes/Al-Hasa_17_2013.fna
/usr/share/doc/parsnp/examples/mers_virus/genomes/Al-Hasa_18_2013.fna
/usr/share/doc/parsnp/examples/mers_virus/genomes/Al-Hasa_19_2013.fna
/usr/share/doc/parsnp/examples/mers_virus/genomes/Al-Hasa_21_2013.fna
/usr/share/doc/parsnp/examples/mers_virus/genomes/Al-Hasa_2_2013.fna
/usr/share/doc/parsnp/examples/mers_virus/genomes/Al-Hasa_25_2013.fna
/usr/share/doc/parsnp/examples/mers_virus/genomes/Al-Hasa_3_2013.fna
/usr/share/doc/parsnp/examples/mers_virus/genomes/Al-Hasa_4_2013.fna
/usr/share/doc/parsnp/examples/mers_virus/genomes/Bisha_1_2012.fna
/usr/share/doc/parsnp/examples/mers_virus/genomes/Buraidah_1_2013.fna
/usr/share/doc/parsnp/examples/mers_virus/genomes/EMC_2012.fna
/usr/share/doc/parsnp/examples/mers_virus/genomes/England1.fna
/usr/share/doc/parsnp/examples/mers_virus/genomes/England-Qatar_2012.fna
/usr/share/doc/parsnp/examples/mers_virus/genomes/FRA-UAE.fna
/usr/share/doc/parsnp/examples/mers_virus/genomes/Hafr-Al-Batin_1_2013.fna
/usr/share/doc/parsnp/examples/mers_virus/genomes/Hafr-Al-Batin_2_2013.fna
/usr/share/doc/parsnp/examples/mers_virus/genomes/Hafr-Al_Batin_6_2013.fna
/usr/share/doc/parsnp/examples/mers_virus/genomes/Indiana-USA-1_Saudi_Arabia_2014.fna
/usr/share/doc/parsnp/examples/mers_virus/genomes/Jeddah_1_2013.fna
/usr/share/doc/parsnp/examples/mers_virus/genomes/Jordan-N3_2012.fna
/usr/share/doc/parsnp/examples/mers_virus/genomes/KF192507.1.fna
/usr/share/doc/parsnp/examples/mers_virus/genomes/KFU-HKU_13.fna
/usr/share/doc/parsnp/examples/mers_virus/genomes/KFU-HKU_19Dam.fna
/usr/share/doc/parsnp/examples/mers_virus/genomes/KFU-HKU_1.fna
/usr/share/doc/parsnp/examples/mers_virus/genomes/KJ477102.1.fna
/usr/share/doc/parsnp/examples/mers_virus/genomes/KSA-CAMEL-363.fna
/usr/share/doc/parsnp/examples/mers_virus/genomes/KSA-CAMEL-376.fna
/usr/share/doc/parsnp/examples/mers_virus/genomes/KSA-CAMEL-378.fna
/usr/share/doc/parsnp/examples/mers_virus/genomes/KSA-CAMEL-503.fna
/usr/share/doc/parsnp/examples/mers_virus/genomes/KSA-CAMEL-505.fna
/usr/share/doc/parsnp/examples/mers_virus/genomes/NC_019843.2.fna
/usr/share/doc/parsnp/examples/mers_virus/genomes/Qatar3.fna
/usr/share/doc/parsnp/examples/mers_virus/genomes/Qatar4.fna
/usr/share/doc/parsnp/examples/mers_virus/genomes/Riyadh_1_2012.fna
/usr/share/doc/parsnp/examples/mers_virus/genomes/Riyadh_14_2013.fna
/usr/share/doc/parsnp/examples/mers_virus/genomes/Riyadh_2_2012.fna
/usr/share/doc/parsnp/examples/mers_virus/genomes/Riyadh_3_2013.fna
/usr/share/doc/parsnp/examples/mers_virus/genomes/Riyadh_4_2013.fna
/usr/share/doc/parsnp/examples/mers_virus/genomes/Riyadh_5_2013.fna
/usr/share/doc/parsnp/examples/mers_virus/genomes/Riyadh_9_2013.fna
/usr/share/doc/parsnp/examples/mers_virus/genomes/Taif_1_2013.fna
/usr/share/doc/parsnp/examples/mers_virus/genomes/Wadi-Ad-Dawasir_1_2013.fna
/usr/share/doc/parsnp/examples/mers_virus/ref/England1.fna
/usr/share/doc/parsnp/examples/mers_virus/ref/England1.gbk
/usr/share/doc/parsnp/NEWS.Debian.gz
/usr/share/doc/parsnp/NEWS.gz
/usr/share/doc/parsnp/README.md
/usr/share/doc/parsnp/README.test
/usr/share/doc/parsnp/run-unit-test
/usr/share/man/man1/parsnp.1.gz
/usr/share/parsnp/template.ini

Використати цей пакет

OpenFactory може завантажити цю операційну систему у віртуальній машині браузера або почати збірку образу з рідною назвою пакета з цього запису.

Спробувати Debian 12 (Bookworm) у браузері Зібрати образ, що містить parsnp

Версії, набори та репозиторії

Кожен рядок: метадані індексу пакетів для однієї версії, архітектури, набору й репозиторію. Назви, URL і розміри зі джерела; посилання є змінним місцем отримання, не перерозповсюдженням OpenFactory.

Жоден опублікований запис не відповідає цьому фільтру набору та архітектури.

Контрольні суми й дати спостереження

For an APT source, signature verification authenticates the repository metadata chain and the Packages index containing this source-reported artifact digest. It does not certify package safety.

Повнота запису каталогу

The completeness score measures metadata coverage, not software quality, security, compatibility, or suitability.

Summary and description: 25/25
Artifact path and source digest: 25/25
Dependency metadata: 15/15
Package-file index: 15/15
Homepage: 5/5
License text: 0/5
Source package or maintainer: 10/10

Recorded total: 95/100

Field source: Debian 12 (Bookworm) main amd64 revision bookworm-main-amd64:9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5, Debian 12 (Bookworm) main arm64 revision bookworm-main-arm64:2ddb1737692e8c45c53e8d57c0ce4cd21c78c5703b830c3226b1423566a06c00. The cross-OS mapping is catalog-derived from the source-reported homepage; it does not establish authorship or publisher identity

Джерела та походження

Field-source links above resolve here. Each source entry names the metadata publisher, trust tier, exact snapshot revision, signature result, and observation time; catalog-derived mappings are labeled separately.

Debian 12 (Bookworm) main amd64Sep 1, 2026
Authoritative source; repository metadata signature verified, revision bookworm-main-amd64:9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5
Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.
Repository-signature verification record
Signed object
https://deb.debian.org/debian/dists/bookworm/InRelease
Signed-object SHA-256
77737fa4b34f2693e982cc9ee35736816c35a7778fc2d326cc1bbf5b301fe1aa
Signer fingerprint
4CB50190207B4758A3F73A796ED0E7B82643E131
Keyring revision
debian-archive-keyring.gpg
SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
Tool and policy
gpgv (GnuPG) 2.4.9
openfactory-software-catalog-signature-v1
Verification time
Sep 1, 2026
Signed Release → package-index hash linkage
Path: main/binary-amd64/Packages.xz
Expected SHA-256: 9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5
Observed SHA-256: 9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5
Result: match verified
Debian 12 (Bookworm) main arm64Sep 1, 2026
Authoritative source; repository metadata signature verified, revision bookworm-main-arm64:2ddb1737692e8c45c53e8d57c0ce4cd21c78c5703b830c3226b1423566a06c00
Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.
Repository-signature verification record
Signed object
https://deb.debian.org/debian/dists/bookworm/InRelease
Signed-object SHA-256
77737fa4b34f2693e982cc9ee35736816c35a7778fc2d326cc1bbf5b301fe1aa
Signer fingerprint
4CB50190207B4758A3F73A796ED0E7B82643E131
Keyring revision
debian-archive-keyring.gpg
SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
Tool and policy
gpgv (GnuPG) 2.4.9
openfactory-software-catalog-signature-v1
Verification time
Sep 1, 2026
Signed Release → package-index hash linkage
Path: main/binary-arm64/Packages.xz
Expected SHA-256: 2ddb1737692e8c45c53e8d57c0ce4cd21c78c5703b830c3226b1423566a06c00
Observed SHA-256: 2ddb1737692e8c45c53e8d57c0ce4cd21c78c5703b830c3226b1423566a06c00
Result: match verified