Package: pbhoney (15.8.24+dfsg-7)
genomic structural variation discovery
Other Packages Related to pbhoney:
dep: [python3] [any]
interactive high-level object-oriented language (default python3 version)
dep: [python3-pbsuite-utils] (= 15.8.24+dfsg-7)
software for Pacific Biosciences sequencing data -- Python utilities
dep: [python3-pbbanana] (= 15.8.24+dfsg-7)
additional utilities for the pbsuite
dep: [python3-pysam]
interface for the SAM/BAM sequence alignment and mapping format (Python 3)
dep: [python3-networkx]
tool to create, manipulate and study complex networks (Python3)
dep: [python3-h5py]
general-purpose Python interface to hdf5
dep: [python3-numpy]
Fast array facility to the Python 3 language
dep: [python3-intervaltree-bio]
Interval tree convenience classes for genomic data -- Python 3 library
dep: [blasr]
mapping single-molecule sequencing reads
dep: [samtools]
processing sequence alignments in SAM, BAM and CRAM formats
rec: [pbdagcon]
sequence consensus using directed acyclic graphs
Download pbhoney
| Architecture | Package size | Installed size | Files | Package |
|---|---|---|---|---|
| all | 1.0 MiB | 3.7 MiB | list of files | Download |
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Field source: Debian 12 (Bookworm) main amd64 revision bookworm-main-amd64:9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5
