Packages / Debian 12 (Bookworm) / science / progressivemauve

Package: progressivemauve (1.2.0+4713+dfsg-5+b1)

multiple genome alignment algorithms

Other Packages Related to progressivemauve:

  • dep: [libboost-filesystem1.74.0] (>= 1.74.0)

    filesystem operations (portable paths, iteration over directories, etc) in C++

  • dep: [libboost-iostreams1.74.0] (>= 1.74.0)

    Boost.Iostreams Library

  • dep: [libboost-program-options1.74.0] (>= 1.74.0)

    program options library for C++

  • dep: [libc6] (>= 2.29)

    GNU C Library: Shared libraries

  • dep: [libgcc-s1] (>= 3.4)

    GCC support library

  • dep: [libgenome0] (>= 1.3.11+svn20110227.4616)

    toolkit for developing bioinformatic related software

  • dep: [libmems1] (>= 1.6.0+4725)

    library to support DNA string matching and comparative genomics

  • dep: [libstdc++6] (>= 9)

    GNU Standard C++ Library v3

Download progressivemauve

ArchitecturePackage sizeInstalled sizeFilesPackage
amd64849 KiB5.5 MiBlist of filesDownload
arm64797 KiB4.9 MiBlist of filesDownload

Paketdateipfade (64)

Paths come from the repository package-file index for the observed builds. They describe archive/package associations, not every file that will exist on a running system after maintainer scripts, alternatives, generated state, diversions, or installation choices.

  • /usr/bin/addUnalignedIntervals
  • /usr/bin/alignmentProjector
  • /usr/bin/backbone_global_to_local
  • /usr/bin/bbAnalyze
  • /usr/bin/bbFilter
  • /usr/bin/coordinateTranslate
  • /usr/bin/createBackboneMFA
  • /usr/bin/extractBCITrees
  • /usr/bin/getAlignmentWindows
  • /usr/bin/getOrthologList
  • /usr/bin/makeBadgerMatrix
  • /usr/bin/mauveAligner
  • /usr/bin/mauveToXMFA
  • /usr/bin/mfa2xmfa
  • /usr/bin/progressiveMauve
  • /usr/bin/projectAndStrip
  • /usr/bin/randomGeneSample
  • /usr/bin/repeatoire
  • /usr/bin/scoreAlignment
  • /usr/bin/stripGapColumns
  • /usr/bin/stripSubsetLCBs
  • /usr/bin/toGrimmFormat
  • /usr/bin/toMultiFastA
  • /usr/bin/toRawSequence
  • /usr/bin/uniqueMerCount
  • /usr/bin/uniquifyTrees
  • /usr/bin/xmfa2maf
  • /usr/share/doc/progressivemauve/changelog.Debian.amd64.gz
  • /usr/share/doc/progressivemauve/changelog.Debian.arm64.gz
  • /usr/share/doc/progressivemauve/changelog.Debian.gz
  • /usr/share/doc/progressivemauve/copyright
  • /usr/share/doc/progressivemauve/README.test
  • /usr/share/doc/progressivemauve/run-unit-test
  • /usr/share/doc/progressivemauve/test_data/all_virii.fasta.gz
  • /usr/share/doc/progressivemauve/test_data/genome_1.gbk.gz
  • /usr/share/doc/progressivemauve/test_data/genome_2.gbk.gz
  • /usr/share/doc/progressivemauve/test_data/genome_3.gbk.gz
  • /usr/share/man/man1/addUnalignedIntervals.1.gz
  • /usr/share/man/man1/alignmentProjector.1.gz
  • /usr/share/man/man1/backbone_global_to_local.1.gz
  • /usr/share/man/man1/bbAnalyze.1.gz
  • /usr/share/man/man1/bbFilter.1.gz
  • /usr/share/man/man1/coordinateTranslate.1.gz
  • /usr/share/man/man1/createBackboneMFA.1.gz
  • /usr/share/man/man1/extractBCITrees.1.gz
  • /usr/share/man/man1/getAlignmentWindows.1.gz
  • /usr/share/man/man1/getOrthologList.1.gz
  • /usr/share/man/man1/makeBadgerMatrix.1.gz
  • /usr/share/man/man1/mauveAligner.1.gz
  • /usr/share/man/man1/mauveToXMFA.1.gz
  • /usr/share/man/man1/mfa2xmfa.1.gz
  • /usr/share/man/man1/progressiveMauve.1.gz
  • /usr/share/man/man1/projectAndStrip.1.gz
  • /usr/share/man/man1/randomGeneSample.1.gz
  • /usr/share/man/man1/repeatoire.1.gz
  • /usr/share/man/man1/scoreAlignment.1.gz
  • /usr/share/man/man1/stripGapColumns.1.gz
  • /usr/share/man/man1/stripSubsetLCBs.1.gz
  • /usr/share/man/man1/toGrimmFormat.1.gz
  • /usr/share/man/man1/toMultiFastA.1.gz
  • /usr/share/man/man1/toRawSequence.1.gz
  • /usr/share/man/man1/uniqueMerCount.1.gz
  • /usr/share/man/man1/uniquifyTrees.1.gz
  • /usr/share/man/man1/xmfa2maf.1.gz

Field source: Debian 12 (Bookworm) main amd64 revision bookworm-main-amd64:9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5

Dieses Paket verwenden

OpenFactory kann dieses Betriebssystem in einer Browser-VM starten oder einen Image-Build mit dem nativen Paketnamen aus diesem Datensatz beginnen.

Versionen, Suiten und Repositories

Jede Zeile ist Paketindex-Metadaten für eine Version, Architektur, Suite und ein Repository. Namen, URLs und Größen stammen aus der Quelle; ein Link ist ein veränderbarer Abrufort, kein Weitergabanspruch von OpenFactory.

VersionReleaseArchitectureRepositoryPackage sizeInstalled sizePublisher repository artifact
1.2.0+4713+dfsg-5+b1bookworm / mainamd64Debian 12 · main · amd64849 KiB5.5 MiBpool/main/p/progressivemauve/progressivemauve_1.2.0+4713+dfsg-5+b1_amd64.deb
1.2.0+4713+dfsg-5+b1bookworm / mainarm64Debian 12 · main · arm64797 KiB4.9 MiBpool/main/p/progressivemauve/progressivemauve_1.2.0+4713+dfsg-5+b1_arm64.deb

Field source: Debian 12 (Bookworm) main amd64 revision bookworm-main-amd64:9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5

Prüfsummen und Beobachtungsdaten

For an APT source, signature verification authenticates the repository metadata chain and the Packages index containing this source-reported artifact digest. It does not certify package safety.

1.2.0+4713+dfsg-5+b1 / amd64Observed Sep 1, 2026 to Sep 1, 2026

Verification status: Metadata observed; artifact bytes were not independently fetched or hashed by this catalog import. The digest below is source-reported.

Source-reported sha256: c5e231a394aa31829561e48d188ec176a85b077a9982ad24231b188687a11eb2

After downloading that exact artifact, compare its bytes with the source-reported expected digest:

printf '%s %s\n' 'c5e231a394aa31829561e48d188ec176a85b077a9982ad24231b188687a11eb2' 'progressivemauve_1.2.0+4713+dfsg-5+b1_amd64.deb' | sha256sum --check --strict -

A match establishes equality with the repository metadata value. It does not establish safety or catalog-side artifact retrieval.

Field source: Debian 12 (Bookworm) main amd64 revision bookworm-main-amd64:9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5

1.2.0+4713+dfsg-5+b1 / arm64Observed Sep 1, 2026 to Sep 1, 2026

Verification status: Metadata observed; artifact bytes were not independently fetched or hashed by this catalog import. The digest below is source-reported.

Source-reported sha256: 28d36318b51d328b566237ad4f2cbc17fac97a207d27602d4767750c6e21f318

After downloading that exact artifact, compare its bytes with the source-reported expected digest:

printf '%s %s\n' '28d36318b51d328b566237ad4f2cbc17fac97a207d27602d4767750c6e21f318' 'progressivemauve_1.2.0+4713+dfsg-5+b1_arm64.deb' | sha256sum --check --strict -

A match establishes equality with the repository metadata value. It does not establish safety or catalog-side artifact retrieval.

Field source: Debian 12 (Bookworm) main arm64 revision bookworm-main-arm64:2ddb1737692e8c45c53e8d57c0ce4cd21c78c5703b830c3226b1423566a06c00

Quellen und Herkunft

Field-source links above resolve here. Each source entry names the metadata publisher, trust tier, exact snapshot revision, signature result, and observation time; catalog-derived mappings are labeled separately.

  • Authoritative source; repository metadata signature verified, revision bookworm-main-amd64:9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5

    Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.

    Repository-signature verification record
    Signed-object SHA-256
    77737fa4b34f2693e982cc9ee35736816c35a7778fc2d326cc1bbf5b301fe1aa
    Signer fingerprint
    4CB50190207B4758A3F73A796ED0E7B82643E131
    Keyring revision
    debian-archive-keyring.gpg
    SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
    Tool and policy
    gpgv (GnuPG) 2.4.9
    openfactory-software-catalog-signature-v1
    Verification time
    Sep 1, 2026
    Signed Release → package-index hash linkage

    Path: main/binary-amd64/Packages.xz
    Expected SHA-256: 9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5
    Observed SHA-256: 9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5
    Result: match verified

  • Authoritative source; repository metadata signature verified, revision bookworm-main-arm64:2ddb1737692e8c45c53e8d57c0ce4cd21c78c5703b830c3226b1423566a06c00

    Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.

    Repository-signature verification record
    Signed-object SHA-256
    77737fa4b34f2693e982cc9ee35736816c35a7778fc2d326cc1bbf5b301fe1aa
    Signer fingerprint
    4CB50190207B4758A3F73A796ED0E7B82643E131
    Keyring revision
    debian-archive-keyring.gpg
    SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
    Tool and policy
    gpgv (GnuPG) 2.4.9
    openfactory-software-catalog-signature-v1
    Verification time
    Sep 1, 2026
    Signed Release → package-index hash linkage

    Path: main/binary-arm64/Packages.xz
    Expected SHA-256: 2ddb1737692e8c45c53e8d57c0ce4cd21c78c5703b830c3226b1423566a06c00
    Observed SHA-256: 2ddb1737692e8c45c53e8d57c0ce4cd21c78c5703b830c3226b1423566a06c00
    Result: match verified