Packages / Debian 12 (Bookworm) / python / python3-biom-format

Package: python3-biom-format (2.1.12-3+b1)

Biological Observation Matrix (BIOM) format (Python 3)

Other Packages Related to python3-biom-format:

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dep: [python3-numpy] (>= 1:1.22.0)
Fast array facility to the Python 3 language
dep: python3-numpy-abi9
Package not available
dep: [cython3]
C-Extensions for Python 3
dep: [python3] (<< 3.12)
interactive high-level object-oriented language (default python3 version)
dep: [python3] (>= 3.11~)
interactive high-level object-oriented language (default python3 version)
dep: [python3-click]
Wrapper around optparse for command line utilities - Python 3.x
dep: [python3-pandas]
data structures for "relational" or "labeled" data
dep: [python3-scipy]
scientific tools for Python 3
dep: [python3] [any]
interactive high-level object-oriented language (default python3 version)
dep: [libc6] (>= 2.4)
GNU C Library: Shared libraries

sug: [python-biom-format-doc]
documentation for BIOM format

Download python3-biom-format

Architecture	Package size	Installed size	Files	Package
amd64	125 KiB	738 KiB	list of files	Download
arm64	120 KiB	818 KiB	list of files	Download

Paketdateipfade (53)

Paths come from the repository package-file index for the observed builds. They describe archive/package associations, not every file that will exist on a running system after maintainer scripts, alternatives, generated state, diversions, or installation choices.

/usr/bin/biom
/usr/lib/python3/dist-packages/biom/assets/exercise_api.py
/usr/lib/python3/dist-packages/biom/assets/exercise_cli.sh
/usr/lib/python3/dist-packages/biom/cli/__init__.py
/usr/lib/python3/dist-packages/biom/cli/installation_informer.py
/usr/lib/python3/dist-packages/biom/cli/metadata_adder.py
/usr/lib/python3/dist-packages/biom/cli/metadata_exporter.py
/usr/lib/python3/dist-packages/biom/cli/table_converter.py
/usr/lib/python3/dist-packages/biom/cli/table_head.py
/usr/lib/python3/dist-packages/biom/cli/table_ids.py
/usr/lib/python3/dist-packages/biom/cli/table_normalizer.py
/usr/lib/python3/dist-packages/biom/cli/table_subsetter.py
/usr/lib/python3/dist-packages/biom/cli/table_summarizer.py
/usr/lib/python3/dist-packages/biom/cli/table_validator.py
/usr/lib/python3/dist-packages/biom/cli/uc_processor.py
/usr/lib/python3/dist-packages/biom/cli/util.py
/usr/lib/python3/dist-packages/biom/err.py
/usr/lib/python3/dist-packages/biom/exception.py
/usr/lib/python3/dist-packages/biom/_filter.cpython-311-aarch64-linux-gnu.so
/usr/lib/python3/dist-packages/biom/_filter.cpython-311-x86_64-linux-gnu.so
/usr/lib/python3/dist-packages/biom_format-2.1.12.egg-info/dependency_links.txt
/usr/lib/python3/dist-packages/biom_format-2.1.12.egg-info/entry_points.txt
/usr/lib/python3/dist-packages/biom_format-2.1.12.egg-info/PKG-INFO
/usr/lib/python3/dist-packages/biom_format-2.1.12.egg-info/requires.txt
/usr/lib/python3/dist-packages/biom_format-2.1.12.egg-info/top_level.txt
/usr/lib/python3/dist-packages/biom/__init__.py
/usr/lib/python3/dist-packages/biom/parse.py
/usr/lib/python3/dist-packages/biom/_subsample.cpython-311-aarch64-linux-gnu.so
/usr/lib/python3/dist-packages/biom/_subsample.cpython-311-x86_64-linux-gnu.so
/usr/lib/python3/dist-packages/biom/table.py
/usr/lib/python3/dist-packages/biom/_transform.cpython-311-aarch64-linux-gnu.so
/usr/lib/python3/dist-packages/biom/_transform.cpython-311-x86_64-linux-gnu.so
/usr/lib/python3/dist-packages/biom/util.py
/usr/lib/python3/dist-packages/examples/min_sparse_otu_table.biom
/usr/lib/python3/dist-packages/examples/min_sparse_otu_table_hdf5.biom
/usr/lib/python3/dist-packages/examples/obs_md.txt
/usr/lib/python3/dist-packages/examples/rich_sparse_otu_table.biom
/usr/lib/python3/dist-packages/examples/rich_sparse_otu_table_hdf5.biom
/usr/lib/python3/dist-packages/examples/sam_md.txt
/usr/share/doc/python3-biom-format/changelog.Debian.amd64.gz
/usr/share/doc/python3-biom-format/changelog.Debian.arm64.gz
/usr/share/doc/python3-biom-format/changelog.Debian.gz
/usr/share/doc/python3-biom-format/changelog.gz
/usr/share/doc/python3-biom-format/copyright
/usr/share/doc/python3-biom-format/examples/min_sparse_otu_table.biom
/usr/share/doc/python3-biom-format/examples/min_sparse_otu_table_hdf5.biom
/usr/share/doc/python3-biom-format/examples/obs_md.txt
/usr/share/doc/python3-biom-format/examples/rich_sparse_otu_table.biom
/usr/share/doc/python3-biom-format/examples/rich_sparse_otu_table_hdf5.biom
/usr/share/doc/python3-biom-format/examples/sam_md.txt
/usr/share/doc/python3-biom-format/README.test
/usr/share/doc/python3-biom-format/run-unit-test
/usr/share/man/man1/biom.1.gz

Field source: Debian 12 (Bookworm) main amd64 revision bookworm-main-amd64:9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5

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Versionen, Suiten und Repositories

Jede Zeile ist Paketindex-Metadaten für eine Version, Architektur, Suite und ein Repository. Namen, URLs und Größen stammen aus der Quelle; ein Link ist ein veränderbarer Abrufort, kein Weitergabanspruch von OpenFactory.

Version	Release	Architecture	Repository	Package size	Installed size	Publisher repository artifact
2.1.12-3+b1	bookworm / main	amd64	Debian 12 · main · amd64	125 KiB	738 KiB	pool/main/p/python-biom-format/python3-biom-format_2.1.12-3+b1_amd64.deb
2.1.12-3+b1	bookworm / main	arm64	Debian 12 · main · arm64	120 KiB	818 KiB	pool/main/p/python-biom-format/python3-biom-format_2.1.12-3+b1_arm64.deb

Field source: Debian 12 (Bookworm) main amd64 revision bookworm-main-amd64:9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5

Prüfsummen und Beobachtungsdaten

For an APT source, signature verification authenticates the repository metadata chain and the Packages index containing this source-reported artifact digest. It does not certify package safety.

2.1.12-3+b1 / amd64Observed Sep 1, 2026 to Sep 1, 2026

Verification status: Metadata observed; artifact bytes were not independently fetched or hashed by this catalog import. The digest below is source-reported.

Source-reported sha256: 82015644e695b13e8388f42e2cdca11469f7a7177b67d46e898e9a8486777df2

After downloading that exact artifact, compare its bytes with the source-reported expected digest:

printf '%s  %s\n' '82015644e695b13e8388f42e2cdca11469f7a7177b67d46e898e9a8486777df2' 'python3-biom-format_2.1.12-3+b1_amd64.deb' | sha256sum --check --strict -

A match establishes equality with the repository metadata value. It does not establish safety or catalog-side artifact retrieval.

Field source: Debian 12 (Bookworm) main amd64 revision bookworm-main-amd64:9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5

2.1.12-3+b1 / arm64Observed Sep 1, 2026 to Sep 1, 2026

Verification status: Metadata observed; artifact bytes were not independently fetched or hashed by this catalog import. The digest below is source-reported.

Source-reported sha256: 984a7bc0f23ca2ab8588871e3599ca1162f47c736db339d6867546915bf80372

After downloading that exact artifact, compare its bytes with the source-reported expected digest:

printf '%s  %s\n' '984a7bc0f23ca2ab8588871e3599ca1162f47c736db339d6867546915bf80372' 'python3-biom-format_2.1.12-3+b1_arm64.deb' | sha256sum --check --strict -

A match establishes equality with the repository metadata value. It does not establish safety or catalog-side artifact retrieval.

Field source: Debian 12 (Bookworm) main arm64 revision bookworm-main-arm64:2ddb1737692e8c45c53e8d57c0ce4cd21c78c5703b830c3226b1423566a06c00

Quellen und Herkunft

Field-source links above resolve here. Each source entry names the metadata publisher, trust tier, exact snapshot revision, signature result, and observation time; catalog-derived mappings are labeled separately.

Debian 12 (Bookworm) main amd64Sep 1, 2026
Authoritative source; repository metadata signature verified, revision bookworm-main-amd64:9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5
Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.
Repository-signature verification record
Signed object
https://deb.debian.org/debian/dists/bookworm/InRelease
Signed-object SHA-256
77737fa4b34f2693e982cc9ee35736816c35a7778fc2d326cc1bbf5b301fe1aa
Signer fingerprint
4CB50190207B4758A3F73A796ED0E7B82643E131
Keyring revision
debian-archive-keyring.gpg
SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
Tool and policy
gpgv (GnuPG) 2.4.9
openfactory-software-catalog-signature-v1
Verification time
Sep 1, 2026
Signed Release → package-index hash linkage
Path: main/binary-amd64/Packages.xz
Expected SHA-256: 9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5
Observed SHA-256: 9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5
Result: match verified
Debian 12 (Bookworm) main arm64Sep 1, 2026
Authoritative source; repository metadata signature verified, revision bookworm-main-arm64:2ddb1737692e8c45c53e8d57c0ce4cd21c78c5703b830c3226b1423566a06c00
Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.
Repository-signature verification record
Signed object
https://deb.debian.org/debian/dists/bookworm/InRelease
Signed-object SHA-256
77737fa4b34f2693e982cc9ee35736816c35a7778fc2d326cc1bbf5b301fe1aa
Signer fingerprint
4CB50190207B4758A3F73A796ED0E7B82643E131
Keyring revision
debian-archive-keyring.gpg
SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
Tool and policy
gpgv (GnuPG) 2.4.9
openfactory-software-catalog-signature-v1
Verification time
Sep 1, 2026
Signed Release → package-index hash linkage
Path: main/binary-arm64/Packages.xz
Expected SHA-256: 2ddb1737692e8c45c53e8d57c0ce4cd21c78c5703b830c3226b1423566a06c00
Observed SHA-256: 2ddb1737692e8c45c53e8d57c0ce4cd21c78c5703b830c3226b1423566a06c00
Result: match verified