Linux workstation

Debian 12 (Bookworm) native package

python3-cooler

library for a sparse, compressed, binary persistent storage

Packages / Debian 12 (Bookworm) / python / python3-cooler

[Source: python-cooler]

Package: python3-cooler (0.9.1-1)

Maintainers:

Debian Med Packaging Team

External Resources:

Homepage: [github.com]

Similar packages:

library for a sparse, compressed, binary persistent storage

Other Packages Related to python3-cooler:

  • dep: [python3-asciitree]

    Draw tree structures using (ASCII or Unicode) characters

  • dep: [python3-click]

    Wrapper around optparse for command line utilities - Python 3.x

  • dep: [python3-cytoolz]

    Toolz in Cython: High performance functional utilities

  • dep: [python3-h5py] (>= 2.5)

    general-purpose Python interface to hdf5

  • dep: [python3-multiprocess]

    better multiprocessing and multithreading in Python

  • dep: [python3-numpy]

    Fast array facility to the Python 3 language

  • dep: [python3-pandas]

    data structures for "relational" or "labeled" data

  • dep: [python3-pyfaidx]

    efficient random access to fasta subsequences for Python 3

  • dep: [python3-scipy] (>= 1.10~)

    scientific tools for Python 3

  • dep: [python3-simplejson]

    simple, fast, extensible JSON encoder/decoder for Python 3.x

  • dep: [python3-yaml]

    YAML parser and emitter for Python3

  • dep: [python3] [any]

    interactive high-level object-oriented language (default python3 version)

  • dep: [python3-six]

    Python 2 and 3 compatibility library

  • dep: [python3-pysam]

    interface for the SAM/BAM sequence alignment and mapping format (Python 3)

  • dep: [python3-biopython]

    Python3 library for bioinformatics

  • dep: [python3-pairix]

    1D/2D indexing and querying with a pair of genomic coordinates

  • rec: [python3-dask]

    Minimal task scheduling abstraction for Python 3

Download python3-cooler

ArchitecturePackage SizeInstalled SizeFiles
amd6484 KiB383 KiB[list of files]
arm6484 KiB383 KiB[list of files]

Package file paths (46)

Paths come from the repository package-file index for the observed builds. They describe archive/package associations, not every file that will exist on a running system after maintainer scripts, alternatives, generated state, diversions, or installation choices.

  • /usr/bin/cooler
  • /usr/lib/python3/dist-packages/cooler-0.9.1.dist-info/entry_points.txt
  • /usr/lib/python3/dist-packages/cooler-0.9.1.dist-info/METADATA
  • /usr/lib/python3/dist-packages/cooler-0.9.1.dist-info/RECORD
  • /usr/lib/python3/dist-packages/cooler-0.9.1.dist-info/top_level.txt
  • /usr/lib/python3/dist-packages/cooler-0.9.1.dist-info/WHEEL
  • /usr/lib/python3/dist-packages/cooler/api.py
  • /usr/lib/python3/dist-packages/cooler/balance.py
  • /usr/lib/python3/dist-packages/cooler/cli/balance.py
  • /usr/lib/python3/dist-packages/cooler/cli/cload.py
  • /usr/lib/python3/dist-packages/cooler/cli/coarsen.py
  • /usr/lib/python3/dist-packages/cooler/cli/csort.py
  • /usr/lib/python3/dist-packages/cooler/cli/digest.py
  • /usr/lib/python3/dist-packages/cooler/cli/dump.py
  • /usr/lib/python3/dist-packages/cooler/cli/fileops.py
  • /usr/lib/python3/dist-packages/cooler/cli/info.py
  • /usr/lib/python3/dist-packages/cooler/cli/__init__.py
  • /usr/lib/python3/dist-packages/cooler/cli/load.py
  • /usr/lib/python3/dist-packages/cooler/cli/makebins.py
  • /usr/lib/python3/dist-packages/cooler/cli/merge.py
  • /usr/lib/python3/dist-packages/cooler/cli/show.py
  • /usr/lib/python3/dist-packages/cooler/cli/_util.py
  • /usr/lib/python3/dist-packages/cooler/cli/zoomify.py
  • /usr/lib/python3/dist-packages/cooler/core/__init__.py
  • /usr/lib/python3/dist-packages/cooler/core/_rangequery.py
  • /usr/lib/python3/dist-packages/cooler/core/_selectors.py
  • /usr/lib/python3/dist-packages/cooler/core/_tableops.py
  • /usr/lib/python3/dist-packages/cooler/create/_create.py
  • /usr/lib/python3/dist-packages/cooler/create/_ingest.py
  • /usr/lib/python3/dist-packages/cooler/create/__init__.py
  • /usr/lib/python3/dist-packages/cooler/fileops.py
  • /usr/lib/python3/dist-packages/cooler/__init__.py
  • /usr/lib/python3/dist-packages/cooler/_logging.py
  • /usr/lib/python3/dist-packages/cooler/__main__.py
  • /usr/lib/python3/dist-packages/cooler/parallel.py
  • /usr/lib/python3/dist-packages/cooler/reduce.py
  • /usr/lib/python3/dist-packages/cooler/sandbox/dask.py
  • /usr/lib/python3/dist-packages/cooler/sandbox/__init__.py
  • /usr/lib/python3/dist-packages/cooler/tools.py
  • /usr/lib/python3/dist-packages/cooler/util.py
  • /usr/lib/python3/dist-packages/cooler/_version.py
  • /usr/share/doc/python3-cooler/changelog.Debian.gz
  • /usr/share/doc/python3-cooler/changelog.gz
  • /usr/share/doc/python3-cooler/copyright
  • /usr/share/doc/python3-cooler/README.Debian
  • /usr/share/man/man1/cooler.1.gz

Field source: Debian 12 (Bookworm) main amd64 revision bookworm-main-amd64:9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5

Use this package

OpenFactory can boot this operating system in a browser VM, or start a build that includes the native package name from this record.

Versions, suites, and repositories

Each row is recorded package-index metadata for one version, architecture, suite, and repository. Names, URLs, and sizes are source-reported; a link is a potentially mutable retrieval location, not an OpenFactory redistribution claim or proof that OpenFactory retained the artifact bytes.

VersionReleaseArchitectureRepositoryPackage sizeInstalled sizePublisher repository artifact
0.9.1-1bookworm / mainamd64Debian 12 · main · amd6484 KiB383 KiBpool/main/p/python-cooler/python3-cooler_0.9.1-1_amd64.deb
0.9.1-1bookworm / mainarm64Debian 12 · main · arm6484 KiB383 KiBpool/main/p/python-cooler/python3-cooler_0.9.1-1_arm64.deb

Field source: Debian 12 (Bookworm) main amd64 revision bookworm-main-amd64:9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5

Checksums and observation dates

For an APT source, signature verification authenticates the repository metadata chain and the Packages index containing this source-reported artifact digest. It does not certify package safety.

0.9.1-1 / amd64Observed Sep 1, 2026 to Sep 1, 2026

Verification status: Metadata observed; artifact bytes were not independently fetched or hashed by this catalog import. The digest below is source-reported.

Source-reported sha256: 2a0aaebd931cc9e70f95beb5af775b978945a87d45e27d304ba256df299fc9af

After downloading that exact artifact, compare its bytes with the source-reported expected digest:

printf '%s %s\n' '2a0aaebd931cc9e70f95beb5af775b978945a87d45e27d304ba256df299fc9af' 'python3-cooler_0.9.1-1_amd64.deb' | sha256sum --check --strict -

A match establishes equality with the repository metadata value. It does not establish safety or catalog-side artifact retrieval.

Field source: Debian 12 (Bookworm) main amd64 revision bookworm-main-amd64:9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5

0.9.1-1 / arm64Observed Sep 1, 2026 to Sep 1, 2026

Verification status: Metadata observed; artifact bytes were not independently fetched or hashed by this catalog import. The digest below is source-reported.

Source-reported sha256: 16e1c1d309f17b1948d47012f54aa2c90cd3f463d25069ec5db14206fe55791c

After downloading that exact artifact, compare its bytes with the source-reported expected digest:

printf '%s %s\n' '16e1c1d309f17b1948d47012f54aa2c90cd3f463d25069ec5db14206fe55791c' 'python3-cooler_0.9.1-1_arm64.deb' | sha256sum --check --strict -

A match establishes equality with the repository metadata value. It does not establish safety or catalog-side artifact retrieval.

Field source: Debian 12 (Bookworm) main arm64 revision bookworm-main-arm64:2ddb1737692e8c45c53e8d57c0ce4cd21c78c5703b830c3226b1423566a06c00

Catalog record completeness

The completeness score measures metadata coverage, not software quality, security, compatibility, or suitability.

Summary and description
25/25
Artifact path and source digest
25/25
Dependency metadata
15/15
Package-file index
15/15
Homepage
5/5
License text
0/5
Source package or maintainer
10/10

Recorded total: 95/100

Field source: Debian 12 (Bookworm) main amd64 revision bookworm-main-amd64:9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5, Debian 12 (Bookworm) main arm64 revision bookworm-main-arm64:2ddb1737692e8c45c53e8d57c0ce4cd21c78c5703b830c3226b1423566a06c00. The cross-OS mapping is catalog-derived from the source-reported homepage; it does not establish authorship or publisher identity

Sources and provenance

Field-source links above resolve here. Each source entry names the metadata publisher, trust tier, exact snapshot revision, signature result, and observation time; catalog-derived mappings are labeled separately.

  • Authoritative source; repository metadata signature verified, revision bookworm-main-amd64:9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5

    Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.

    Repository-signature verification record
    Signed-object SHA-256
    77737fa4b34f2693e982cc9ee35736816c35a7778fc2d326cc1bbf5b301fe1aa
    Signer fingerprint
    4CB50190207B4758A3F73A796ED0E7B82643E131
    Keyring revision
    debian-archive-keyring.gpg
    SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
    Tool and policy
    gpgv (GnuPG) 2.4.9
    openfactory-software-catalog-signature-v1
    Verification time
    Sep 1, 2026
    Signed Release → package-index hash linkage

    Path: main/binary-amd64/Packages.xz
    Expected SHA-256: 9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5
    Observed SHA-256: 9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5
    Result: match verified

  • Authoritative source; repository metadata signature verified, revision bookworm-main-arm64:2ddb1737692e8c45c53e8d57c0ce4cd21c78c5703b830c3226b1423566a06c00

    Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.

    Repository-signature verification record
    Signed-object SHA-256
    77737fa4b34f2693e982cc9ee35736816c35a7778fc2d326cc1bbf5b301fe1aa
    Signer fingerprint
    4CB50190207B4758A3F73A796ED0E7B82643E131
    Keyring revision
    debian-archive-keyring.gpg
    SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
    Tool and policy
    gpgv (GnuPG) 2.4.9
    openfactory-software-catalog-signature-v1
    Verification time
    Sep 1, 2026
    Signed Release → package-index hash linkage

    Path: main/binary-arm64/Packages.xz
    Expected SHA-256: 2ddb1737692e8c45c53e8d57c0ce4cd21c78c5703b830c3226b1423566a06c00
    Observed SHA-256: 2ddb1737692e8c45c53e8d57c0ce4cd21c78c5703b830c3226b1423566a06c00
    Result: match verified

python3-cooler Package for Debian 12 (Bookworm) | OpenFactory