Packages / Debian 12 (Bookworm) / gnu-r / r-bioc-beachmat
Package: r-bioc-beachmat (2.14.0+ds-1)
Maintainers:
External Resources:
Homepage: [bioconductor.org]
I/O for several formats storing matrix data
Other Packages Related to r-bioc-beachmat:
dep: [r-base-core] (>= 4.2.2.20221110-1)
GNU R core of statistical computation and graphics system
dep: r-api-4.0
Package not available
dep: r-api-bioc-3.16
Package not available
dep: [r-bioc-delayedarray] (>= 0.15.14)
BioConductor delayed operations on array-like objects
dep: [r-bioc-biocgenerics]
generic functions for Bioconductor
dep: [r-cran-matrix]
GNU R package of classes for dense and sparse matrices
dep: [r-cran-rcpp]
GNU R package for Seamless R and C++ Integration
dep: [libc6] (>= 2.14)
GNU C Library: Shared libraries
dep: [libgcc-s1] (>= 3.0)
GCC support library
dep: [libstdc++6] (>= 5.2)
GNU Standard C++ Library v3
sug: [r-cran-testthat]
GNU R testsuite
sug: [r-bioc-biocstyle]
standard styles for vignettes and other Bioconductor documents
sug: [r-cran-knitr]
GNU R package for dynamic report generation using Literate Programming
sug: [r-cran-rmarkdown]
convert R markdown documents into a variety of formats
sug: [r-cran-rcmdcheck]
Run 'R CMD check' from 'R' and Capture Results
sug: [r-bioc-biocparallel]
BioConductor facilities for parallel evaluation
sug: [r-bioc-hdf5array]
HDF5 backend for DelayedArray objects
Download r-bioc-beachmat
| Architecture | Package Size | Installed Size | Files |
|---|---|---|---|
| amd64 | 184 KiB | 1.1 MiB | [list of files] |
| arm64 | 182 KiB | 1.1 MiB | [list of files] |
Package file paths (226)
Paths come from the repository package-file index for the observed builds. They describe archive/package associations, not every file that will exist on a running system after maintainer scripts, alternatives, generated state, diversions, or installation choices.
- /usr/lib/R/site-library/beachmat/CITATION
- /usr/lib/R/site-library/beachmat/DESCRIPTION
- /usr/lib/R/site-library/beachmat/doc/external.R
- /usr/lib/R/site-library/beachmat/doc/external.Rmd
- /usr/lib/R/site-library/beachmat/doc/index.html
- /usr/lib/R/site-library/beachmat/doc/input.R
- /usr/lib/R/site-library/beachmat/doc/input.Rmd
- /usr/lib/R/site-library/beachmat/doc/linking.R
- /usr/lib/R/site-library/beachmat/doc/linking.Rmd
- /usr/lib/R/site-library/beachmat/doc/output.R
- /usr/lib/R/site-library/beachmat/doc/output.Rmd
- /usr/lib/R/site-library/beachmat/easy_register.sh
- /usr/lib/R/site-library/beachmat/extensions/DESCRIPTION
- /usr/lib/R/site-library/beachmat/extensions/NAMESPACE
- /usr/lib/R/site-library/beachmat/extensions/R/beachmat.R
- /usr/lib/R/site-library/beachmat/extensions/R/class.R
- /usr/lib/R/site-library/beachmat/extensions/src/aaron_matrix.h
- /usr/lib/R/site-library/beachmat/extensions/src/aaron_output.h
- /usr/lib/R/site-library/beachmat/extensions/src/character_access.cpp
- /usr/lib/R/site-library/beachmat/extensions/src/character_output.cpp
- /usr/lib/R/site-library/beachmat/extensions/src/exports.cpp
- /usr/lib/R/site-library/beachmat/extensions/src/exports.h
- /usr/lib/R/site-library/beachmat/extensions/src/integer_access.cpp
- /usr/lib/R/site-library/beachmat/extensions/src/integer_output.cpp
- /usr/lib/R/site-library/beachmat/extensions/tests/testthat.R
- /usr/lib/R/site-library/beachmat/extensions/tests/testthat/setup-all.R
- /usr/lib/R/site-library/beachmat/extensions/tests/testthat/test-character.R
- /usr/lib/R/site-library/beachmat/extensions/tests/testthat/test-integer.R
- /usr/lib/R/site-library/beachmat/help/aliases.rds
- /usr/lib/R/site-library/beachmat/help/AnIndex
- /usr/lib/R/site-library/beachmat/help/beachmat.rdb
- /usr/lib/R/site-library/beachmat/help/beachmat.rdx
- /usr/lib/R/site-library/beachmat/help/paths.rds
- /usr/lib/R/site-library/beachmat/html/00Index.html
- /usr/lib/R/site-library/beachmat/html/R.css
- /usr/lib/R/site-library/beachmat/include/beachmat3/as_gCMatrix.h
- /usr/lib/R/site-library/beachmat/include/beachmat3/beachmat.h
- /usr/lib/R/site-library/beachmat/include/beachmat3/Csparse_reader.h
- /usr/lib/R/site-library/beachmat/include/beachmat3/dim_checker.h
- /usr/lib/R/site-library/beachmat/include/beachmat3/lin_matrix.h
- /usr/lib/R/site-library/beachmat/include/beachmat3/ordinary_reader.h
- /usr/lib/R/site-library/beachmat/include/beachmat3/read_lin_block.h
- /usr/lib/R/site-library/beachmat/include/beachmat3/utils.h
- /usr/lib/R/site-library/beachmat/include/beachmat/character_matrix.h
- /usr/lib/R/site-library/beachmat/include/beachmat/input/Csparse_reader.h
- /usr/lib/R/site-library/beachmat/include/beachmat/input/delayed_reader.h
- /usr/lib/R/site-library/beachmat/include/beachmat/input/dense_reader.h
- /usr/lib/R/site-library/beachmat/include/beachmat/input/external_reader.h
- /usr/lib/R/site-library/beachmat/include/beachmat/input/LIN_matrix.h
- /usr/lib/R/site-library/beachmat/include/beachmat/input/LIN_methods.h
- /usr/lib/R/site-library/beachmat/include/beachmat/input/simple_reader.h
- /usr/lib/R/site-library/beachmat/include/beachmat/input/unknown_reader.h
- /usr/lib/R/site-library/beachmat/include/beachmat/integer_matrix.h
- /usr/lib/R/site-library/beachmat/include/beachmat/logical_matrix.h
- /usr/lib/R/site-library/beachmat/include/beachmat/numeric_matrix.h
- /usr/lib/R/site-library/beachmat/include/beachmat/output/Csparse_writer.h
- /usr/lib/R/site-library/beachmat/include/beachmat/output/external_writer.h
- /usr/lib/R/site-library/beachmat/include/beachmat/output/LIN_methods.h
- /usr/lib/R/site-library/beachmat/include/beachmat/output/LIN_output.h
- /usr/lib/R/site-library/beachmat/include/beachmat/output/output_param.h
- /usr/lib/R/site-library/beachmat/include/beachmat/output/simple_writer.h
- /usr/lib/R/site-library/beachmat/include/beachmat/utils/const_column.h
- /usr/lib/R/site-library/beachmat/include/beachmat/utils/copyable_vector.h
- /usr/lib/R/site-library/beachmat/include/beachmat/utils/dim_checker.h
- /usr/lib/R/site-library/beachmat/include/beachmat/utils/dispatch.h
- /usr/lib/R/site-library/beachmat/include/beachmat/utils/external.h
- /usr/lib/R/site-library/beachmat/include/beachmat/utils/raw_structure.h
- /usr/lib/R/site-library/beachmat/include/beachmat/utils/utils.h
- /usr/lib/R/site-library/beachmat/include/byteme/GzipFileReader.hpp
- /usr/lib/R/site-library/beachmat/include/byteme/IstreamReader.hpp
- /usr/lib/R/site-library/beachmat/include/byteme/RawBufferReader.hpp
- /usr/lib/R/site-library/beachmat/include/byteme/RawFileReader.hpp
- /usr/lib/R/site-library/beachmat/include/byteme/Reader.hpp
- /usr/lib/R/site-library/beachmat/include/byteme/SomeFileReader.hpp
- /usr/lib/R/site-library/beachmat/include/byteme/temp_file_path.hpp
- /usr/lib/R/site-library/beachmat/include/byteme/ZlibBufferReader.hpp
- /usr/lib/R/site-library/beachmat/include/fetch.sh
- /usr/lib/R/site-library/beachmat/include/raticate/CSparseMatrix.hpp
- /usr/lib/R/site-library/beachmat/include/raticate/DelayedAbind.hpp
- /usr/lib/R/site-library/beachmat/include/raticate/DelayedAperm.hpp
- /usr/lib/R/site-library/beachmat/include/raticate/DelayedMatrix.hpp
- /usr/lib/R/site-library/beachmat/include/raticate/DelayedSubset.hpp
- /usr/lib/R/site-library/beachmat/include/raticate/parallelize.hpp
- /usr/lib/R/site-library/beachmat/include/raticate/raticate.hpp
- /usr/lib/R/site-library/beachmat/include/raticate/SimpleMatrix.hpp
- /usr/lib/R/site-library/beachmat/include/raticate/SparseArraySeed.hpp
- /usr/lib/R/site-library/beachmat/include/raticate/UnknownMatrix.hpp
- /usr/lib/R/site-library/beachmat/include/raticate/utils.hpp
- /usr/lib/R/site-library/beachmat/include/tatami/base/arith_scalar_helpers.hpp
- /usr/lib/R/site-library/beachmat/include/tatami/base/arith_vector_helpers.hpp
- /usr/lib/R/site-library/beachmat/include/tatami/base/CompressedSparseMatrix.hpp
- /usr/lib/R/site-library/beachmat/include/tatami/base/DelayedBind.hpp
- /usr/lib/R/site-library/beachmat/include/tatami/base/DelayedIsometricOp.hpp
- /usr/lib/R/site-library/beachmat/include/tatami/base/DelayedSubsetBlock.hpp
- /usr/lib/R/site-library/beachmat/include/tatami/base/DelayedSubset.hpp
- /usr/lib/R/site-library/beachmat/include/tatami/base/DelayedTranspose.hpp
- /usr/lib/R/site-library/beachmat/include/tatami/base/DenseMatrix.hpp
- /usr/lib/R/site-library/beachmat/include/tatami/base/has_data.hpp
- /usr/lib/R/site-library/beachmat/include/tatami/base/math_helpers.hpp
- /usr/lib/R/site-library/beachmat/include/tatami/base/Matrix.hpp
- /usr/lib/R/site-library/beachmat/include/tatami/base/SparseRange.hpp
- /usr/lib/R/site-library/beachmat/include/tatami/base/Workspace.hpp
- /usr/lib/R/site-library/beachmat/include/tatami/ext/ArrayView.hpp
- /usr/lib/R/site-library/beachmat/include/tatami/ext/convert_to_layered_sparse.hpp
- /usr/lib/R/site-library/beachmat/include/tatami/ext/HDF5CompressedSparseMatrix.hpp
- /usr/lib/R/site-library/beachmat/include/tatami/ext/HDF5DenseMatrix.hpp
- /usr/lib/R/site-library/beachmat/include/tatami/ext/LayeredMatrixData.hpp
- /usr/lib/R/site-library/beachmat/include/tatami/ext/layered_utils.hpp
- /usr/lib/R/site-library/beachmat/include/tatami/ext/MatrixMarket.hpp
- /usr/lib/R/site-library/beachmat/include/tatami/ext/MatrixMarket_layered.hpp
- /usr/lib/R/site-library/beachmat/include/tatami/ext/SomeNumericArray.hpp
- /usr/lib/R/site-library/beachmat/include/tatami/stats/apply.hpp
- /usr/lib/R/site-library/beachmat/include/tatami/stats/config.hpp
- /usr/lib/R/site-library/beachmat/include/tatami/stats/medians.hpp
- /usr/lib/R/site-library/beachmat/include/tatami/stats/ranges.hpp
- /usr/lib/R/site-library/beachmat/include/tatami/stats/sums.hpp
- /usr/lib/R/site-library/beachmat/include/tatami/stats/variances.hpp
- /usr/lib/R/site-library/beachmat/include/tatami/tatami.h
- /usr/lib/R/site-library/beachmat/include/tatami/tatami.hpp
- /usr/lib/R/site-library/beachmat/include/tatami/utils/bind_intersection.hpp
- /usr/lib/R/site-library/beachmat/include/tatami/utils/compress_sparse_triplets.hpp
- /usr/lib/R/site-library/beachmat/include/tatami/utils/convert_to_dense.hpp
- /usr/lib/R/site-library/beachmat/include/tatami/utils/convert_to_sparse.hpp
- /usr/lib/R/site-library/beachmat/include/tatami/utils/NakedArray.hpp
- /usr/lib/R/site-library/beachmat/include/tatami/utils/wrap_shared_ptr.hpp
- /usr/lib/R/site-library/beachmat/INDEX
- /usr/lib/R/site-library/beachmat/libs/beachmat.so
- /usr/lib/R/site-library/beachmat/Meta/features.rds
- /usr/lib/R/site-library/beachmat/Meta/hsearch.rds
- /usr/lib/R/site-library/beachmat/Meta/links.rds
- /usr/lib/R/site-library/beachmat/Meta/nsInfo.rds
- /usr/lib/R/site-library/beachmat/Meta/package.rds
- /usr/lib/R/site-library/beachmat/Meta/Rd.rds
- /usr/lib/R/site-library/beachmat/Meta/vignette.rds
- /usr/lib/R/site-library/beachmat/NAMESPACE
- /usr/lib/R/site-library/beachmat/NEWS.Rd
- /usr/lib/R/site-library/beachmat/newtests/DESCRIPTION
- /usr/lib/R/site-library/beachmat/newtests/NAMESPACE
- /usr/lib/R/site-library/beachmat/newtests/R/namespace.R
- /usr/lib/R/site-library/beachmat/newtests/R/RcppExports.R
- /usr/lib/R/site-library/beachmat/newtests/src/RcppExports.cpp
- /usr/lib/R/site-library/beachmat/newtests/src/test_clone.cpp
- /usr/lib/R/site-library/beachmat/newtests/src/test_errors.cpp
- /usr/lib/R/site-library/beachmat/newtests/src/test_get_column.cpp
- /usr/lib/R/site-library/beachmat/newtests/src/test_get_row.cpp
- /usr/lib/R/site-library/beachmat/newtests/src/test_get_sparse_column.cpp
- /usr/lib/R/site-library/beachmat/newtests/src/test_get_sparse_row.cpp
- /usr/lib/R/site-library/beachmat/newtests/src/test_promotion.cpp
- /usr/lib/R/site-library/beachmat/newtests/tests/testthat.R
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- /usr/lib/R/site-library/beachmat/newtests/tests/testthat/test-clone.R
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- /usr/lib/R/site-library/beachmat/testpkg/src/get_all.cpp
- /usr/lib/R/site-library/beachmat/testpkg/src/get_all.h
- /usr/lib/R/site-library/beachmat/testpkg/src/get_class.cpp
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- /usr/lib/R/site-library/beachmat/testpkg/src/get_const.h
- /usr/lib/R/site-library/beachmat/testpkg/src/get_errors.cpp
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- /usr/lib/R/site-library/beachmat/testpkg/src/get_indexed.cpp
- /usr/lib/R/site-library/beachmat/testpkg/src/get_indexed.h
- /usr/lib/R/site-library/beachmat/testpkg/src/get_multi.cpp
- /usr/lib/R/site-library/beachmat/testpkg/src/get_multi.h
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- /usr/lib/R/site-library/beachmat/testpkg/src/set_all.cpp
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- /usr/lib/R/site-library/beachmat/testpkg/src/set_class.cpp
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- /usr/lib/R/site-library/beachmat/testpkg/src/set_indexed.cpp
- /usr/lib/R/site-library/beachmat/testpkg/src/set_indexed.h
- /usr/lib/R/site-library/beachmat/testpkg/src/set_slice.cpp
- /usr/lib/R/site-library/beachmat/testpkg/src/set_slice.h
- /usr/lib/R/site-library/beachmat/testpkg/src/set_types.cpp
- /usr/lib/R/site-library/beachmat/testpkg/src/set_varslice.cpp
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- /usr/lib/R/site-library/beachmat/testpkg/tests/testthat/test-numeric-output.R
- /usr/share/doc/r-bioc-beachmat/changelog.Debian.gz
- /usr/share/doc/r-bioc-beachmat/copyright
Field source: Debian 12 (Bookworm) main amd64 revision bookworm-main-amd64:9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5
