Packages / Debian 12 (Bookworm) / gnu-r / r-bioc-edger

Package: r-bioc-edger (3.40.2+dfsg-1)

Empirical analysis of digital gene expression data in R

Other Packages Related to r-bioc-edger:

  • dep: [r-base-core] (>= 4.2.2.20221110-2)

    GNU R core of statistical computation and graphics system

  • dep: r-api-4.0

    Package not available

  • dep: r-api-bioc-3.16

    Package not available

  • dep: [r-bioc-limma] (>= 3.41.5)

    linear models for microarray data

  • dep: [r-cran-locfit]

    GNU R local regression, likelihood and density estimation

  • dep: [r-cran-rcpp]

    GNU R package for Seamless R and C++ Integration

  • dep: [libblas3]

    Basic Linear Algebra Reference implementations, shared library

  • dep: libblas.so.3

    Package not available

  • dep: [libc6] (>= 2.29)

    GNU C Library: Shared libraries

  • dep: [libgcc-s1] (>= 3.0)

    GCC support library

  • dep: [liblapack3]

    Library of linear algebra routines 3 - shared version

  • dep: liblapack.so.3

    Package not available

  • dep: [libstdc++6] (>= 5.2)

    GNU Standard C++ Library v3

Download r-bioc-edger

ArchitecturePackage sizeInstalled sizeFilesPackage
amd641.0 MiB1.4 MiBlist of filesDownload
arm641.0 MiB1.4 MiBlist of filesDownload

Package file paths (33)

Paths come from the repository package-file index for the observed builds. They describe archive/package associations, not every file that will exist on a running system after maintainer scripts, alternatives, generated state, diversions, or installation choices.

  • /usr/lib/R/site-library/edgeR/CITATION
  • /usr/lib/R/site-library/edgeR/DESCRIPTION
  • /usr/lib/R/site-library/edgeR/doc/edgeR.pdf
  • /usr/lib/R/site-library/edgeR/doc/edgeR.Rnw
  • /usr/lib/R/site-library/edgeR/doc/index.html
  • /usr/lib/R/site-library/edgeR/help/aliases.rds
  • /usr/lib/R/site-library/edgeR/help/AnIndex
  • /usr/lib/R/site-library/edgeR/help/edgeR.rdb
  • /usr/lib/R/site-library/edgeR/help/edgeR.rdx
  • /usr/lib/R/site-library/edgeR/help/paths.rds
  • /usr/lib/R/site-library/edgeR/html/00Index.html
  • /usr/lib/R/site-library/edgeR/html/R.css
  • /usr/lib/R/site-library/edgeR/INDEX
  • /usr/lib/R/site-library/edgeR/libs/edgeR.so
  • /usr/lib/R/site-library/edgeR/Meta/features.rds
  • /usr/lib/R/site-library/edgeR/Meta/hsearch.rds
  • /usr/lib/R/site-library/edgeR/Meta/links.rds
  • /usr/lib/R/site-library/edgeR/Meta/nsInfo.rds
  • /usr/lib/R/site-library/edgeR/Meta/package.rds
  • /usr/lib/R/site-library/edgeR/Meta/Rd.rds
  • /usr/lib/R/site-library/edgeR/Meta/vignette.rds
  • /usr/lib/R/site-library/edgeR/NAMESPACE
  • /usr/lib/R/site-library/edgeR/NEWS.Rd
  • /usr/lib/R/site-library/edgeR/R/edgeR
  • /usr/lib/R/site-library/edgeR/R/edgeR.rdb
  • /usr/lib/R/site-library/edgeR/R/edgeR.rdx
  • /usr/share/doc/r-bioc-edger/changelog.Debian.gz
  • /usr/share/doc/r-bioc-edger/copyright
  • /usr/share/doc/r-bioc-edger/README.Debian
  • /usr/share/doc/r-bioc-edger/README.test
  • /usr/share/doc/r-bioc-edger/run-unit-test
  • /usr/share/doc/r-bioc-edger/tests/edgeR-Tests.R.gz
  • /usr/share/doc/r-bioc-edger/tests/edgeR-Tests.Rout.save.gz

Field source: Debian 12 (Bookworm) main amd64 revision bookworm-main-amd64:9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5

Use this package

OpenFactory can boot this operating system in a browser VM, or start a build that includes the native package name from this record.

Versions, suites, and repositories

Each row is recorded package-index metadata for one version, architecture, suite, and repository. Names, URLs, and sizes are source-reported; a link is a potentially mutable retrieval location, not an OpenFactory redistribution claim or proof that OpenFactory retained the artifact bytes.

VersionReleaseArchitectureRepositoryPackage sizeInstalled sizePublisher repository artifact
3.40.2+dfsg-1bookworm / mainamd64Debian 12 · main · amd641.0 MiB1.4 MiBpool/main/r/r-bioc-edger/r-bioc-edger_3.40.2+dfsg-1_amd64.deb
3.40.2+dfsg-1bookworm / mainarm64Debian 12 · main · arm641.0 MiB1.4 MiBpool/main/r/r-bioc-edger/r-bioc-edger_3.40.2+dfsg-1_arm64.deb

Field source: Debian 12 (Bookworm) main amd64 revision bookworm-main-amd64:9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5

Checksums and observation dates

For an APT source, signature verification authenticates the repository metadata chain and the Packages index containing this source-reported artifact digest. It does not certify package safety.

3.40.2+dfsg-1 / amd64Observed Sep 1, 2026 to Sep 1, 2026

Verification status: Metadata observed; artifact bytes were not independently fetched or hashed by this catalog import. The digest below is source-reported.

Source-reported sha256: d9a1c4420c586f09905f3896fc9d8c63c8a474158746c67ee61cd98892da614c

After downloading that exact artifact, compare its bytes with the source-reported expected digest:

printf '%s %s\n' 'd9a1c4420c586f09905f3896fc9d8c63c8a474158746c67ee61cd98892da614c' 'r-bioc-edger_3.40.2+dfsg-1_amd64.deb' | sha256sum --check --strict -

A match establishes equality with the repository metadata value. It does not establish safety or catalog-side artifact retrieval.

Field source: Debian 12 (Bookworm) main amd64 revision bookworm-main-amd64:9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5

3.40.2+dfsg-1 / arm64Observed Sep 1, 2026 to Sep 1, 2026

Verification status: Metadata observed; artifact bytes were not independently fetched or hashed by this catalog import. The digest below is source-reported.

Source-reported sha256: d89a706e08665a2bcbf3d98d1a0b612c6b2e4bcfd4833519b015598beff86d91

After downloading that exact artifact, compare its bytes with the source-reported expected digest:

printf '%s %s\n' 'd89a706e08665a2bcbf3d98d1a0b612c6b2e4bcfd4833519b015598beff86d91' 'r-bioc-edger_3.40.2+dfsg-1_arm64.deb' | sha256sum --check --strict -

A match establishes equality with the repository metadata value. It does not establish safety or catalog-side artifact retrieval.

Field source: Debian 12 (Bookworm) main arm64 revision bookworm-main-arm64:2ddb1737692e8c45c53e8d57c0ce4cd21c78c5703b830c3226b1423566a06c00

Sources and provenance

Field-source links above resolve here. Each source entry names the metadata publisher, trust tier, exact snapshot revision, signature result, and observation time; catalog-derived mappings are labeled separately.

  • Authoritative source; repository metadata signature verified, revision bookworm-main-amd64:9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5

    Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.

    Repository-signature verification record
    Signed-object SHA-256
    77737fa4b34f2693e982cc9ee35736816c35a7778fc2d326cc1bbf5b301fe1aa
    Signer fingerprint
    4CB50190207B4758A3F73A796ED0E7B82643E131
    Keyring revision
    debian-archive-keyring.gpg
    SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
    Tool and policy
    gpgv (GnuPG) 2.4.9
    openfactory-software-catalog-signature-v1
    Verification time
    Sep 1, 2026
    Signed Release → package-index hash linkage

    Path: main/binary-amd64/Packages.xz
    Expected SHA-256: 9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5
    Observed SHA-256: 9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5
    Result: match verified

  • Authoritative source; repository metadata signature verified, revision bookworm-main-arm64:2ddb1737692e8c45c53e8d57c0ce4cd21c78c5703b830c3226b1423566a06c00

    Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.

    Repository-signature verification record
    Signed-object SHA-256
    77737fa4b34f2693e982cc9ee35736816c35a7778fc2d326cc1bbf5b301fe1aa
    Signer fingerprint
    4CB50190207B4758A3F73A796ED0E7B82643E131
    Keyring revision
    debian-archive-keyring.gpg
    SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
    Tool and policy
    gpgv (GnuPG) 2.4.9
    openfactory-software-catalog-signature-v1
    Verification time
    Sep 1, 2026
    Signed Release → package-index hash linkage

    Path: main/binary-arm64/Packages.xz
    Expected SHA-256: 2ddb1737692e8c45c53e8d57c0ce4cd21c78c5703b830c3226b1423566a06c00
    Observed SHA-256: 2ddb1737692e8c45c53e8d57c0ce4cd21c78c5703b830c3226b1423566a06c00
    Result: match verified