Package: cufflinks (2.2.1+dfsg.1-10) Transcript assembly, differential expression and regulation for RNA-Seq Other Packages Related to cufflinks: dep: [libboost-serialization1.83.0 ] (>= 1.83.0)
serialization library for C++
dep: [libboost-thread1.83.0 ] (>= 1.83.0)
portable C++ multi-threading
dep: [libc6 ] (>= 2.38)
GNU C Library: Shared libraries
dep: [libgcc-s1 ] (>= 4.0)
GCC support library
dep: [libstdc++6 ] (>= 14)
GNU Standard C++ Library v3
dep: [zlib1g ] (>= 1:1.2.3.3)
compression library - runtime
dep: [python3 ] [any]
interactive high-level object-oriented language (default python3 version)
enh: tophat
Package not available
Package file paths (21) Paths come from the repository package-file index for the observed builds. They describe archive/package associations, not every file that will exist on a running system after maintainer scripts, alternatives, generated state, diversions, or installation choices.
/usr/bin/compress_gtf /usr/bin/cuffcompare /usr/bin/cuffdiff /usr/bin/cufflinks /usr/bin/cuffmerge /usr/bin/cuffnorm /usr/bin/cuffquant /usr/bin/gtf_to_sam /usr/share/doc/cufflinks/AUTHORS /usr/share/doc/cufflinks/changelog.Debian.gz /usr/share/doc/cufflinks/copyright /usr/share/doc/cufflinks/README /usr/share/doc/cufflinks/README.Debian /usr/share/man/man1/compress_gtf.1.gz /usr/share/man/man1/cuffcompare.1.gz /usr/share/man/man1/cuffdiff.1.gz /usr/share/man/man1/cufflinks.1.gz /usr/share/man/man1/cuffmerge.1.gz /usr/share/man/man1/cuffnorm.1.gz /usr/share/man/man1/cuffquant.1.gz /usr/share/man/man1/gtf_to_sam.1.gz Field source: Debian 13 (Trixie) non-free amd64 revision trixie-non-free-amd64:873a1152a9641bbbd32ae06d9bea40c0eb9486caeea340a786d4ab84cb6de6c5
Use this package OpenFactory can boot this operating system in a browser VM, or start a build that includes the native package name from this record.
Versions, suites, and repositories Each row is recorded package-index metadata for one version, architecture, suite, and repository. Names, URLs, and sizes are source-reported; a link is a potentially mutable retrieval location, not an OpenFactory redistribution claim or proof that OpenFactory retained the artifact bytes.
Checksums and observation dates For an APT source, signature verification authenticates the repository metadata chain and the Packages index containing this source-reported artifact digest. It does not certify package safety.
2.2.1+dfsg.1-10 / amd64 Observed Sep 1, 2026 to Sep 1, 2026
Verification status: Metadata observed; artifact bytes were not independently fetched or hashed by this catalog import. The digest below is source-reported.
Source-reported sha256: cf02dbcd57147a5336025e8b4c83d2990488d76e168e2387cbb632168e83ae40
After downloading that exact artifact, compare its bytes with the source-reported expected digest:
printf '%s %s\n' 'cf02dbcd57147a5336025e8b4c83d2990488d76e168e2387cbb632168e83ae40' 'cufflinks_2.2.1+dfsg.1-10_amd64.deb' | sha256sum --check --strict -A match establishes equality with the repository metadata value. It does not establish safety or catalog-side artifact retrieval.
Field source: Debian 13 (Trixie) non-free amd64 revision trixie-non-free-amd64:873a1152a9641bbbd32ae06d9bea40c0eb9486caeea340a786d4ab84cb6de6c5
2.2.1+dfsg.1-10 / arm64 Observed Sep 1, 2026 to Sep 1, 2026
Verification status: Metadata observed; artifact bytes were not independently fetched or hashed by this catalog import. The digest below is source-reported.
Source-reported sha256: a78c6fc4c4abc9f29952b571772d09b97630f09361dbb326b790b1e54b97858c
After downloading that exact artifact, compare its bytes with the source-reported expected digest:
printf '%s %s\n' 'a78c6fc4c4abc9f29952b571772d09b97630f09361dbb326b790b1e54b97858c' 'cufflinks_2.2.1+dfsg.1-10_arm64.deb' | sha256sum --check --strict -A match establishes equality with the repository metadata value. It does not establish safety or catalog-side artifact retrieval.
Field source: Debian 13 (Trixie) non-free arm64 revision trixie-non-free-arm64:6187284b3ec84e045bc98bc85f551b3235a274dc567fa547a853554d18217905
Sources and provenance Field-source links above resolve here. Each source entry names the metadata publisher, trust tier, exact snapshot revision, signature result, and observation time; catalog-derived mappings are labeled separately.
Authoritative source; repository metadata signature verified, revision trixie-non-free-amd64:873a1152a9641bbbd32ae06d9bea40c0eb9486caeea340a786d4ab84cb6de6c5
Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.
Repository-signature verification record
Signed-object SHA-256 98b25b5cd185c59d34aa6e4c3e9b5b8f01bbe9d104fe2dcfbcd30dc0a14a59ed
Signer fingerprint 4CB50190207B4758A3F73A796ED0E7B82643E131
Keyring revision debian-archive-keyring.gpgSHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
Tool and policy gpgv (GnuPG) 2.4.9 openfactory-software-catalog-signature-v1
Verification time Sep 1, 2026 Signed Release → package-index hash linkage Path: non-free/binary-amd64/Packages.xz Expected SHA-256: 873a1152a9641bbbd32ae06d9bea40c0eb9486caeea340a786d4ab84cb6de6c5 Observed SHA-256: 873a1152a9641bbbd32ae06d9bea40c0eb9486caeea340a786d4ab84cb6de6c5 Result: match verified
Authoritative source; repository metadata signature verified, revision trixie-non-free-arm64:6187284b3ec84e045bc98bc85f551b3235a274dc567fa547a853554d18217905
Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.
Repository-signature verification record
Signed-object SHA-256 98b25b5cd185c59d34aa6e4c3e9b5b8f01bbe9d104fe2dcfbcd30dc0a14a59ed
Signer fingerprint 4CB50190207B4758A3F73A796ED0E7B82643E131
Keyring revision debian-archive-keyring.gpgSHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
Tool and policy gpgv (GnuPG) 2.4.9 openfactory-software-catalog-signature-v1
Verification time Sep 1, 2026 Signed Release → package-index hash linkage Path: non-free/binary-arm64/Packages.xz Expected SHA-256: 6187284b3ec84e045bc98bc85f551b3235a274dc567fa547a853554d18217905 Observed SHA-256: 6187284b3ec84e045bc98bc85f551b3235a274dc567fa547a853554d18217905 Result: match verified