Linux workstation

Debian 13 (Trixie) native package

hmmer

profile hidden Markov models for protein sequence analysis

Packages / Debian 13 (Trixie) / science / hmmer

[Source: hmmer]

Package: hmmer (3.4+dfsg-2+b2)

Maintainers:

Debian Med Packaging Team

External Resources:

Homepage: [hmmer.org]

Similar packages:

  • [hmmer-doc]

    profile hidden Markov models for protein sequence analysis (docs)

  • [hmmer-examples]

    profile hidden Markov models for protein sequence analysis (examples)

profile hidden Markov models for protein sequence analysis

Other Packages Related to hmmer:

  • dep: [libc6] (>= 2.34)

    GNU C Library: Shared libraries

  • dep: [libdivsufsort3] (>= 2.0.1)

    fast suffix array construction

  • sug: [hmmer-doc] (>= 3.4+dfsg-2)

    profile hidden Markov models for protein sequence analysis (docs)

Download hmmer

ArchitecturePackage SizeInstalled SizeFiles
amd641.0 MiB6.3 MiB[list of files]
arm64957 KiB7.0 MiB[list of files]

Paketdateipfade (45)

Paths come from the repository package-file index for the observed builds. They describe archive/package associations, not every file that will exist on a running system after maintainer scripts, alternatives, generated state, diversions, or installation choices.

  • /usr/bin/alimask
  • /usr/bin/hmmalign
  • /usr/bin/hmmbuild
  • /usr/bin/hmmconvert
  • /usr/bin/hmmemit
  • /usr/bin/hmmfetch
  • /usr/bin/hmmlogo
  • /usr/bin/hmmpgmd
  • /usr/bin/hmmpgmd_shard
  • /usr/bin/hmmpress
  • /usr/bin/hmmscan
  • /usr/bin/hmmsearch
  • /usr/bin/hmmsim
  • /usr/bin/hmmstat
  • /usr/bin/jackhmmer
  • /usr/bin/makehmmerdb
  • /usr/bin/nhmmer
  • /usr/bin/nhmmscan
  • /usr/bin/phmmer
  • /usr/lib/aarch64-linux-gnu/hmmer/hmmc2
  • /usr/lib/x86_64-linux-gnu/hmmer/hmmc2
  • /usr/share/doc/hmmer/changelog.Debian.arm64.gz
  • /usr/share/doc/hmmer/changelog.Debian.gz
  • /usr/share/doc/hmmer/copyright
  • /usr/share/doc/hmmer/README.Debian
  • /usr/share/man/man1/alimask.1.gz
  • /usr/share/man/man1/hmmalign.1.gz
  • /usr/share/man/man1/hmmbuild.1.gz
  • /usr/share/man/man1/hmmconvert.1.gz
  • /usr/share/man/man1/hmmemit.1.gz
  • /usr/share/man/man1/hmmer.1.gz
  • /usr/share/man/man1/hmmfetch.1.gz
  • /usr/share/man/man1/hmmlogo.1.gz
  • /usr/share/man/man1/hmmpgmd.1.gz
  • /usr/share/man/man1/hmmpgmd_shard.1.gz
  • /usr/share/man/man1/hmmpress.1.gz
  • /usr/share/man/man1/hmmscan.1.gz
  • /usr/share/man/man1/hmmsearch.1.gz
  • /usr/share/man/man1/hmmsim.1.gz
  • /usr/share/man/man1/hmmstat.1.gz
  • /usr/share/man/man1/jackhmmer.1.gz
  • /usr/share/man/man1/makehmmerdb.1.gz
  • /usr/share/man/man1/nhmmer.1.gz
  • /usr/share/man/man1/nhmmscan.1.gz
  • /usr/share/man/man1/phmmer.1.gz

Field source: Debian 13 (Trixie) main arm64 revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908

Dieses Paket verwenden

OpenFactory kann dieses Betriebssystem in einer Browser-VM starten oder einen Image-Build mit dem nativen Paketnamen aus diesem Datensatz beginnen.

Debian 13 (Trixie) im Browser testenImage mit hmmer bauen

Versionen, Suiten und Repositories

Jede Zeile ist Paketindex-Metadaten für eine Version, Architektur, Suite und ein Repository. Namen, URLs und Größen stammen aus der Quelle; ein Link ist ein veränderbarer Abrufort, kein Weitergabanspruch von OpenFactory.

VersionReleaseArchitectureRepositoryPackage sizeInstalled sizePublisher repository artifact
3.4+dfsg-2+b2trixie / mainarm64Debian 13 · main · arm64957 KiB7.0 MiBpool/main/h/hmmer/hmmer_3.4+dfsg-2+b2_arm64.deb
3.4+dfsg-2trixie / mainamd64Debian 13 · main · amd641.0 MiB6.3 MiBpool/main/h/hmmer/hmmer_3.4+dfsg-2_amd64.deb

Field source: Debian 13 (Trixie) main arm64 revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908

Prüfsummen und Beobachtungsdaten

For an APT source, signature verification authenticates the repository metadata chain and the Packages index containing this source-reported artifact digest. It does not certify package safety.

3.4+dfsg-2+b2 / arm64Observed Sep 1, 2026 to Sep 1, 2026

Verification status: Metadata observed; artifact bytes were not independently fetched or hashed by this catalog import. The digest below is source-reported.

Source-reported sha256: 211ff0c54122619e8e55c39573299d97bc43f8f371d9bbb21327afff9eb0c362

After downloading that exact artifact, compare its bytes with the source-reported expected digest:

printf '%s %s\n' '211ff0c54122619e8e55c39573299d97bc43f8f371d9bbb21327afff9eb0c362' 'hmmer_3.4+dfsg-2+b2_arm64.deb' | sha256sum --check --strict -

A match establishes equality with the repository metadata value. It does not establish safety or catalog-side artifact retrieval.

Field source: Debian 13 (Trixie) main arm64 revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908

3.4+dfsg-2 / amd64Observed Sep 1, 2026 to Sep 1, 2026

Verification status: Metadata observed; artifact bytes were not independently fetched or hashed by this catalog import. The digest below is source-reported.

Source-reported sha256: a06b8441605ad4baaf34eacf6bb94152d37afc0edc4d30006e8743970b7c6be5

After downloading that exact artifact, compare its bytes with the source-reported expected digest:

printf '%s %s\n' 'a06b8441605ad4baaf34eacf6bb94152d37afc0edc4d30006e8743970b7c6be5' 'hmmer_3.4+dfsg-2_amd64.deb' | sha256sum --check --strict -

A match establishes equality with the repository metadata value. It does not establish safety or catalog-side artifact retrieval.

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3

Vollständigkeit des Katalogsatzes

The completeness score measures metadata coverage, not software quality, security, compatibility, or suitability.

Summary and description
25/25
Artifact path and source digest
25/25
Dependency metadata
15/15
Package-file index
15/15
Homepage
5/5
License text
0/5
Source package or maintainer
10/10

Recorded total: 95/100

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3, Debian 13 (Trixie) main arm64 revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908. The cross-OS mapping is catalog-derived from the source-reported homepage; it does not establish authorship or publisher identity

Quellen und Herkunft

Field-source links above resolve here. Each source entry names the metadata publisher, trust tier, exact snapshot revision, signature result, and observation time; catalog-derived mappings are labeled separately.

  • Debian 13 (Trixie) main amd64Sep 1, 2026

    Authoritative source; repository metadata signature verified, revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3

    Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.

    Repository-signature verification record
    Signed-object SHA-256
    98b25b5cd185c59d34aa6e4c3e9b5b8f01bbe9d104fe2dcfbcd30dc0a14a59ed
    Signer fingerprint
    4CB50190207B4758A3F73A796ED0E7B82643E131
    Keyring revision
    debian-archive-keyring.gpg
    SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
    Tool and policy
    gpgv (GnuPG) 2.4.9
    openfactory-software-catalog-signature-v1
    Verification time
    Sep 1, 2026
    Signed Release → package-index hash linkage

    Path: main/binary-amd64/Packages.xz
    Expected SHA-256: 3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
    Observed SHA-256: 3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
    Result: match verified

  • Debian 13 (Trixie) main arm64Sep 1, 2026

    Authoritative source; repository metadata signature verified, revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908

    Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.

    Repository-signature verification record
    Signed-object SHA-256
    98b25b5cd185c59d34aa6e4c3e9b5b8f01bbe9d104fe2dcfbcd30dc0a14a59ed
    Signer fingerprint
    4CB50190207B4758A3F73A796ED0E7B82643E131
    Keyring revision
    debian-archive-keyring.gpg
    SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
    Tool and policy
    gpgv (GnuPG) 2.4.9
    openfactory-software-catalog-signature-v1
    Verification time
    Sep 1, 2026
    Signed Release → package-index hash linkage

    Path: main/binary-arm64/Packages.xz
    Expected SHA-256: 753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908
    Observed SHA-256: 753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908
    Result: match verified