Debian 13 (Trixie) native package

kalign

Global and progressive multiple sequence alignment

Packages / Debian 13 (Trixie) / science / kalign

[Source: kalign]

Package: kalign (1:3.4.0-1+b3)

Maintainers:

Debian Med Packaging Team

External Resources:

Homepage: [msa.sbc.su.se]

Global and progressive multiple sequence alignment

Other Packages Related to kalign:

dep: [libc6] (>= 2.34)
GNU C Library: Shared libraries
dep: [libgomp1] (>= 4.9)
GCC OpenMP (GOMP) support library

enh: [bioperl-run]
BioPerl wrappers: scripts
enh: [t-coffee]
Multiple Sequence Alignment

Download kalign

Architecture	Package Size	Installed Size	Files
amd64	135 KiB	1.1 MiB	[list of files]
arm64	87 KiB	407 KiB	[list of files]

Paketdateipfade (35)

Paths come from the repository package-file index for the observed builds. They describe archive/package associations, not every file that will exist on a running system after maintainer scripts, alternatives, generated state, diversions, or installation choices.

/usr/bin/kalign
/usr/bin/kalignfmt
/usr/include/kalign/kalign_export.h
/usr/include/kalign/kalign.h
/usr/lib/kalign/bin/simd-dispatch
/usr/lib/kalign/kalign-avx
/usr/lib/kalign/kalign-avx2
/usr/lib/kalign/kalignfmt-avx
/usr/lib/kalign/kalignfmt-avx2
/usr/lib/kalign/kalignfmt-plain
/usr/lib/kalign/kalignfmt-sse4.1
/usr/lib/kalign/kalign-plain
/usr/lib/kalign/kalign-sse4.1
/usr/share/doc/kalign/changelog.Debian.amd64.gz
/usr/share/doc/kalign/changelog.Debian.arm64.gz
/usr/share/doc/kalign/changelog.Debian.gz
/usr/share/doc/kalign/changelog.gz
/usr/share/doc/kalign/copyright
/usr/share/doc/kalign/examples/BB11001_EOF.msf
/usr/share/doc/kalign/examples/BB11001.msf
/usr/share/doc/kalign/examples/BB11001.tfa
/usr/share/doc/kalign/examples/BB12006.msf
/usr/share/doc/kalign/examples/BB12006.tfa
/usr/share/doc/kalign/examples/BB30014.msf
/usr/share/doc/kalign/examples/BB30014.tfa
/usr/share/doc/kalign/examples/example.fa
/usr/share/doc/kalign/examples/seqsA.fa
/usr/share/doc/kalign/examples/seqsB.fa
/usr/share/doc/kalign/examples/seqsC.fa
/usr/share/doc/kalign/README.md.gz
/usr/share/doc/kalign/README.test
/usr/share/doc/kalign/run-unit-test
/usr/share/doc/kalign/TODO.Debian
/usr/share/man/man1/kalign.1.gz
/usr/share/man/man1/kalignfmt.1.gz

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3

Dieses Paket verwenden

OpenFactory kann dieses Betriebssystem in einer Browser-VM starten oder einen Image-Build mit dem nativen Paketnamen aus diesem Datensatz beginnen.

Debian 13 (Trixie) im Browser testen Image mit kalign bauen

Versionen, Suiten und Repositories

Jede Zeile ist Paketindex-Metadaten für eine Version, Architektur, Suite und ein Repository. Namen, URLs und Größen stammen aus der Quelle; ein Link ist ein veränderbarer Abrufort, kein Weitergabanspruch von OpenFactory.

Version	Release	Architecture	Repository	Package size	Installed size	Publisher repository artifact
1:3.4.0-1+b3	trixie / main	amd64	Debian 13 · main · amd64	135 KiB	1.1 MiB	pool/main/k/kalign/kalign_3.4.0-1+b3_amd64.deb
1:3.4.0-1+b3	trixie / main	arm64	Debian 13 · main · arm64	87 KiB	407 KiB	pool/main/k/kalign/kalign_3.4.0-1+b3_arm64.deb

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3

Prüfsummen und Beobachtungsdaten

For an APT source, signature verification authenticates the repository metadata chain and the Packages index containing this source-reported artifact digest. It does not certify package safety.

1:3.4.0-1+b3 / amd64Observed Sep 1, 2026 to Sep 1, 2026

Verification status: Metadata observed; artifact bytes were not independently fetched or hashed by this catalog import. The digest below is source-reported.

Source-reported sha256: 0cd5f024f1bc310fa2cf0bbee3f63a7af26ccf458209e63d02c5f9a07aeeef43

After downloading that exact artifact, compare its bytes with the source-reported expected digest:

printf '%s  %s\n' '0cd5f024f1bc310fa2cf0bbee3f63a7af26ccf458209e63d02c5f9a07aeeef43' 'kalign_3.4.0-1+b3_amd64.deb' | sha256sum --check --strict -

A match establishes equality with the repository metadata value. It does not establish safety or catalog-side artifact retrieval.

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3

1:3.4.0-1+b3 / arm64Observed Sep 1, 2026 to Sep 1, 2026

Verification status: Metadata observed; artifact bytes were not independently fetched or hashed by this catalog import. The digest below is source-reported.

Source-reported sha256: 84cb562669ad8038beb37271ee4e24e806653837f23b0d5d6c68261cdf0b7fc9

After downloading that exact artifact, compare its bytes with the source-reported expected digest:

printf '%s  %s\n' '84cb562669ad8038beb37271ee4e24e806653837f23b0d5d6c68261cdf0b7fc9' 'kalign_3.4.0-1+b3_arm64.deb' | sha256sum --check --strict -

A match establishes equality with the repository metadata value. It does not establish safety or catalog-side artifact retrieval.

Field source: Debian 13 (Trixie) main arm64 revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908

Vollständigkeit des Katalogsatzes

The completeness score measures metadata coverage, not software quality, security, compatibility, or suitability.

Summary and description: 25/25
Artifact path and source digest: 25/25
Dependency metadata: 15/15
Package-file index: 15/15
Homepage: 5/5
License text: 0/5
Source package or maintainer: 10/10

Recorded total: 95/100

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3, Debian 13 (Trixie) main arm64 revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908. The cross-OS mapping is catalog-derived from the source-reported homepage; it does not establish authorship or publisher identity

Quellen und Herkunft

Field-source links above resolve here. Each source entry names the metadata publisher, trust tier, exact snapshot revision, signature result, and observation time; catalog-derived mappings are labeled separately.

Debian 13 (Trixie) main amd64Sep 1, 2026
Authoritative source; repository metadata signature verified, revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.
Repository-signature verification record
Signed object
https://deb.debian.org/debian/dists/trixie/InRelease
Signed-object SHA-256
98b25b5cd185c59d34aa6e4c3e9b5b8f01bbe9d104fe2dcfbcd30dc0a14a59ed
Signer fingerprint
4CB50190207B4758A3F73A796ED0E7B82643E131
Keyring revision
debian-archive-keyring.gpg
SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
Tool and policy
gpgv (GnuPG) 2.4.9
openfactory-software-catalog-signature-v1
Verification time
Sep 1, 2026
Signed Release → package-index hash linkage
Path: main/binary-amd64/Packages.xz
Expected SHA-256: 3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
Observed SHA-256: 3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
Result: match verified
Debian 13 (Trixie) main arm64Sep 1, 2026
Authoritative source; repository metadata signature verified, revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908
Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.
Repository-signature verification record
Signed object
https://deb.debian.org/debian/dists/trixie/InRelease
Signed-object SHA-256
98b25b5cd185c59d34aa6e4c3e9b5b8f01bbe9d104fe2dcfbcd30dc0a14a59ed
Signer fingerprint
4CB50190207B4758A3F73A796ED0E7B82643E131
Keyring revision
debian-archive-keyring.gpg
SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
Tool and policy
gpgv (GnuPG) 2.4.9
openfactory-software-catalog-signature-v1
Verification time
Sep 1, 2026
Signed Release → package-index hash linkage
Path: main/binary-arm64/Packages.xz
Expected SHA-256: 753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908
Observed SHA-256: 753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908
Result: match verified