Packages / Debian 13 (Trixie) / science / optimir
Package: optimir (1.2-2)
Maintainers:
External Resources:
Homepage: [github.com]
Integrating genetic variations in miRNA alignment
Other Packages Related to optimir:
dep: [python3-biopython]
Python3 library for bioinformatics
dep: [python3-pysam]
interface for the SAM/BAM sequence alignment and mapping format (Python 3)
dep: [python3] [any]
interactive high-level object-oriented language (default python3 version)
dep: [bowtie2]
ultrafast memory-efficient short read aligner
dep: [cutadapt]
Clean biological sequences from high-throughput sequencing reads
dep: [samtools]
processing sequence alignments in SAM, BAM and CRAM formats
rec: [r-cran-gridextra]
GNU R package with extensions for the grid package
rec: [r-cran-ggplot2]
implementation of the Grammar of Graphics
Download optimir
| Architecture | Package Size | Installed Size | Files |
|---|---|---|---|
| all | 1002 KiB | 7.2 MiB | [list of files] |
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Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3