Linux workstation

Debian 13 (Trixie) native package

python3-ost

Open-Source Computational Structural Biology Framework - Python 3 package

Packages / Debian 13 (Trixie) / python / python3-ost

[Source: openstructure]

Package: python3-ost (2.9.3-2)

Maintainers:

Debichem Team

External Resources:

Homepage: [www.openstructure.org]

Similar packages:

Open-Source Computational Structural Biology Framework - Python 3 package

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  • dep: [libost-conop2.9] (>= 2.9.3)

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  • dep: [libost-db2.9] (>= 2.9.3)

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  • dep: [libost-geom2.9] (>= 2.9.3)

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  • dep: [libost-gfx2.9] (>= 2.9.3)

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  • dep: [libost-img-alg2.9] (>= 2.9.3)

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  • dep: [libost-img2.9] (>= 2.9.3)

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  • dep: [libost-info2.9] (>= 2.9.3)

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  • dep: [libost-io2.9] (>= 2.9.3)

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  • dep: [libost-mol-alg2.9] (>= 2.9.3)

    Open-Source Computational Structural Biology Framework

  • dep: [libost-mol-mm2.9] (>= 2.9.3)

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  • dep: [libost-mol2.9] (>= 2.9.3)

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  • dep: [libost-seq-alg2.9] (>= 2.9.3)

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Download python3-ost

ArchitecturePackage SizeInstalled SizeFiles
amd643.8 MiB29 MiB[list of files]

Package file paths (138)

Paths come from the repository package-file index for the observed builds. They describe archive/package associations, not every file that will exist on a running system after maintainer scripts, alternatives, generated state, diversions, or installation choices.

  • /usr/lib/python3/dist-packages/ost/bindings/blast.py
  • /usr/lib/python3/dist-packages/ost/bindings/cadscore.py
  • /usr/lib/python3/dist-packages/ost/bindings/clustalw.py
  • /usr/lib/python3/dist-packages/ost/bindings/dockq.py
  • /usr/lib/python3/dist-packages/ost/bindings/dssp.py
  • /usr/lib/python3/dist-packages/ost/bindings/hbplus.py
  • /usr/lib/python3/dist-packages/ost/bindings/hhblits2.py
  • /usr/lib/python3/dist-packages/ost/bindings/hhblits3.py
  • /usr/lib/python3/dist-packages/ost/bindings/hhblits.py
  • /usr/lib/python3/dist-packages/ost/bindings/ialign.py
  • /usr/lib/python3/dist-packages/ost/bindings/__init__.py
  • /usr/lib/python3/dist-packages/ost/bindings/kclust.py
  • /usr/lib/python3/dist-packages/ost/bindings/lga.py
  • /usr/lib/python3/dist-packages/ost/bindings/mmseqs2.py
  • /usr/lib/python3/dist-packages/ost/bindings/msms.py
  • /usr/lib/python3/dist-packages/ost/bindings/naccess.py
  • /usr/lib/python3/dist-packages/ost/bindings/_ost_bindings.cpython-313-x86_64-linux-gnu.so
  • /usr/lib/python3/dist-packages/ost/bindings/tmtools.py
  • /usr/lib/python3/dist-packages/ost/bindings/utils.py
  • /usr/lib/python3/dist-packages/ost/conop/cleanup.py
  • /usr/lib/python3/dist-packages/ost/conop/__init__.py
  • /usr/lib/python3/dist-packages/ost/conop/_ost_conop.cpython-313-x86_64-linux-gnu.so
  • /usr/lib/python3/dist-packages/ost/db/__init__.py
  • /usr/lib/python3/dist-packages/ost/db/_ost_db.cpython-313-x86_64-linux-gnu.so
  • /usr/lib/python3/dist-packages/ost/dng_startup.py
  • /usr/lib/python3/dist-packages/ost/geom/__init__.py
  • /usr/lib/python3/dist-packages/ost/geom/_ost_geom.cpython-313-x86_64-linux-gnu.so
  • /usr/lib/python3/dist-packages/ost/gfx/__init__.py
  • /usr/lib/python3/dist-packages/ost/gfx/_ost_gfx.cpython-313-x86_64-linux-gnu.so
  • /usr/lib/python3/dist-packages/ost/gfx/py_gfx_obj.py
  • /usr/lib/python3/dist-packages/ost/gui/dng/__init__.py
  • /usr/lib/python3/dist-packages/ost/gui/dng/init.py
  • /usr/lib/python3/dist-packages/ost/gui/dng/menu.py
  • /usr/lib/python3/dist-packages/ost/gui/dng/superpositiondialog.py
  • /usr/lib/python3/dist-packages/ost/gui/dng/termuse.py
  • /usr/lib/python3/dist-packages/ost/gui/gosty_startup.py
  • /usr/lib/python3/dist-packages/ost/gui/helpwidget.py
  • /usr/lib/python3/dist-packages/ost/gui/init_context_menu.py
  • /usr/lib/python3/dist-packages/ost/gui/init_menubar.py
  • /usr/lib/python3/dist-packages/ost/gui/__init__.py
  • /usr/lib/python3/dist-packages/ost/gui/init_spacenav.py
  • /usr/lib/python3/dist-packages/ost/gui/init_splash.py
  • /usr/lib/python3/dist-packages/ost/gui/_ost_gui.cpython-313-x86_64-linux-gnu.so
  • /usr/lib/python3/dist-packages/ost/gui/scene/color_options_widget.py
  • /usr/lib/python3/dist-packages/ost/gui/scene/color_select_widget.py
  • /usr/lib/python3/dist-packages/ost/gui/scene/combo_options_widget.py
  • /usr/lib/python3/dist-packages/ost/gui/scene/cpk_widget.py
  • /usr/lib/python3/dist-packages/ost/gui/scene/custom_widget.py
  • /usr/lib/python3/dist-packages/ost/gui/scene/gradient_editor_widget.py
  • /usr/lib/python3/dist-packages/ost/gui/scene/gradient_info_handler.py
  • /usr/lib/python3/dist-packages/ost/gui/scene/gradient_list_model.py
  • /usr/lib/python3/dist-packages/ost/gui/scene/gradient_preset_widget.py
  • /usr/lib/python3/dist-packages/ost/gui/scene/hsc_widget.py
  • /usr/lib/python3/dist-packages/ost/gui/scene/immutable_gradient_info_handler.py
  • /usr/lib/python3/dist-packages/ost/gui/scene/immutable_preset_info_handler.py
  • /usr/lib/python3/dist-packages/ost/gui/scene/init_inspector.py
  • /usr/lib/python3/dist-packages/ost/gui/scene/__init__.py
  • /usr/lib/python3/dist-packages/ost/gui/scene/inspector_widget.py
  • /usr/lib/python3/dist-packages/ost/gui/scene/line_trace_widget.py
  • /usr/lib/python3/dist-packages/ost/gui/scene/map_level_widget.py
  • /usr/lib/python3/dist-packages/ost/gui/scene/preset_editor_list_model.py
  • /usr/lib/python3/dist-packages/ost/gui/scene/preset_editor_widget.py
  • /usr/lib/python3/dist-packages/ost/gui/scene/preset_info_handler.py
  • /usr/lib/python3/dist-packages/ost/gui/scene/preset_list_model.py
  • /usr/lib/python3/dist-packages/ost/gui/scene/preset.py
  • /usr/lib/python3/dist-packages/ost/gui/scene/preset_widget.py
  • /usr/lib/python3/dist-packages/ost/gui/scene/query_editor.py
  • /usr/lib/python3/dist-packages/ost/gui/scene/remote.py
  • /usr/lib/python3/dist-packages/ost/gui/scene/render_mode_widget.py
  • /usr/lib/python3/dist-packages/ost/gui/scene/render_op.py
  • /usr/lib/python3/dist-packages/ost/gui/scene/render_options_widget.py
  • /usr/lib/python3/dist-packages/ost/gui/scene/scene_observer_impl.py
  • /usr/lib/python3/dist-packages/ost/gui/scene/scene_selection_helper.py
  • /usr/lib/python3/dist-packages/ost/gui/scene/simple_widget.py
  • /usr/lib/python3/dist-packages/ost/gui/scene/sline_widget.py
  • /usr/lib/python3/dist-packages/ost/gui/scene/toolbar_options_widget.py
  • /usr/lib/python3/dist-packages/ost/gui/scene/trace_widget.py
  • /usr/lib/python3/dist-packages/ost/gui/scene/tube_widget.py
  • /usr/lib/python3/dist-packages/ost/gui/scene/uniform_color_widget.py
  • /usr/lib/python3/dist-packages/ost/gui/scene/visibility_op.py
  • /usr/lib/python3/dist-packages/ost/gui/scene/wireframe_widget.py
  • /usr/lib/python3/dist-packages/ost/gui/table.py
  • /usr/lib/python3/dist-packages/ost/gui/trajectory_viewer.py
  • /usr/lib/python3/dist-packages/ost/img/alg/__init__.py
  • /usr/lib/python3/dist-packages/ost/img/alg/_ost_img_alg.cpython-313-x86_64-linux-gnu.so
  • /usr/lib/python3/dist-packages/ost/img/__init__.py
  • /usr/lib/python3/dist-packages/ost/img/_ost_img.cpython-313-x86_64-linux-gnu.so
  • /usr/lib/python3/dist-packages/ost/info/__init__.py
  • /usr/lib/python3/dist-packages/ost/info/_ost_info.cpython-313-x86_64-linux-gnu.so
  • /usr/lib/python3/dist-packages/ost/__init__.py
  • /usr/lib/python3/dist-packages/ost/io/__init__.py
  • /usr/lib/python3/dist-packages/ost/io/_ost_io.cpython-313-x86_64-linux-gnu.so
  • /usr/lib/python3/dist-packages/ost/io/remote.py
  • /usr/lib/python3/dist-packages/ost/io/repository.py
  • /usr/lib/python3/dist-packages/ost/mol/alg/bb_lddt.py
  • /usr/lib/python3/dist-packages/ost/mol/alg/chain_mapping.py
  • /usr/lib/python3/dist-packages/ost/mol/alg/contact_score.py
  • /usr/lib/python3/dist-packages/ost/mol/alg/dockq.py
  • /usr/lib/python3/dist-packages/ost/mol/alg/hbond.py
  • /usr/lib/python3/dist-packages/ost/mol/alg/helix_kinks.py
  • /usr/lib/python3/dist-packages/ost/mol/alg/__init__.py
  • /usr/lib/python3/dist-packages/ost/mol/alg/lddt.py
  • /usr/lib/python3/dist-packages/ost/mol/alg/ligand_scoring_base.py
  • /usr/lib/python3/dist-packages/ost/mol/alg/ligand_scoring_lddtpli.py
  • /usr/lib/python3/dist-packages/ost/mol/alg/ligand_scoring.py
  • /usr/lib/python3/dist-packages/ost/mol/alg/ligand_scoring_scrmsd.py
  • /usr/lib/python3/dist-packages/ost/mol/alg/_ost_mol_alg.cpython-313-x86_64-linux-gnu.so
  • /usr/lib/python3/dist-packages/ost/mol/alg/qsscore.py
  • /usr/lib/python3/dist-packages/ost/mol/alg/qsscoring.py
  • /usr/lib/python3/dist-packages/ost/mol/alg/scoring.py
  • /usr/lib/python3/dist-packages/ost/mol/alg/stereochemistry.py
  • /usr/lib/python3/dist-packages/ost/mol/alg/structure_analysis.py
  • /usr/lib/python3/dist-packages/ost/mol/alg/superpose.py
  • /usr/lib/python3/dist-packages/ost/mol/alg/trajectory_analysis.py
  • /usr/lib/python3/dist-packages/ost/mol/alg/views.py
  • /usr/lib/python3/dist-packages/ost/mol/__init__.py
  • /usr/lib/python3/dist-packages/ost/mol/mm/antechamber.py
  • /usr/lib/python3/dist-packages/ost/mol/mm/__init__.py
  • /usr/lib/python3/dist-packages/ost/mol/mm/_ost_mol_mm.cpython-313-x86_64-linux-gnu.so
  • /usr/lib/python3/dist-packages/ost/mol/_ost_mol.cpython-313-x86_64-linux-gnu.so
  • /usr/lib/python3/dist-packages/ost/_ost_base.cpython-313-x86_64-linux-gnu.so
  • /usr/lib/python3/dist-packages/ost/ost_startup.py
  • /usr/lib/python3/dist-packages/ost/seq/alg/aaindex.py
  • /usr/lib/python3/dist-packages/ost/seq/alg/__init__.py
  • /usr/lib/python3/dist-packages/ost/seq/alg/mat.py
  • /usr/lib/python3/dist-packages/ost/seq/alg/_ost_seq_alg.cpython-313-x86_64-linux-gnu.so
  • /usr/lib/python3/dist-packages/ost/seq/alg/renumber.py
  • /usr/lib/python3/dist-packages/ost/seq/__init__.py
  • /usr/lib/python3/dist-packages/ost/seq/_ost_seq.cpython-313-x86_64-linux-gnu.so
  • /usr/lib/python3/dist-packages/ost/settings.py
  • /usr/lib/python3/dist-packages/ost/stutil.py
  • /usr/lib/python3/dist-packages/ost/table.py
  • /usr/lib/python3/dist-packages/ost/table_selector.py
  • /usr/lib/python3/dist-packages/ost/testutils.py
  • /usr/lib/python3/dist-packages/ost/xmlrunner.py
  • /usr/share/doc/python3-ost/changelog.Debian.gz
  • /usr/share/doc/python3-ost/changelog.gz
  • /usr/share/doc/python3-ost/copyright

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3

Use this package

OpenFactory can boot this operating system in a browser VM, or start a build that includes the native package name from this record.

Try Debian 13 (Trixie) in the browserBuild an image that includes python3-ost

Versions, suites, and repositories

Each row is recorded package-index metadata for one version, architecture, suite, and repository. Names, URLs, and sizes are source-reported; a link is a potentially mutable retrieval location, not an OpenFactory redistribution claim or proof that OpenFactory retained the artifact bytes.

VersionReleaseArchitectureRepositoryPackage sizeInstalled sizePublisher repository artifact
2.9.3-2trixie / mainamd64Debian 13 · main · amd643.8 MiB29 MiBpool/main/o/openstructure/python3-ost_2.9.3-2_amd64.deb

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3

Checksums and observation dates

For an APT source, signature verification authenticates the repository metadata chain and the Packages index containing this source-reported artifact digest. It does not certify package safety.

2.9.3-2 / amd64Observed Sep 1, 2026 to Sep 1, 2026

Verification status: Metadata observed; artifact bytes were not independently fetched or hashed by this catalog import. The digest below is source-reported.

Source-reported sha256: f728b0c223f4d93addab3a683aae530e2c1547c62e612c5d50a0c743e0354b87

After downloading that exact artifact, compare its bytes with the source-reported expected digest:

printf '%s %s\n' 'f728b0c223f4d93addab3a683aae530e2c1547c62e612c5d50a0c743e0354b87' 'python3-ost_2.9.3-2_amd64.deb' | sha256sum --check --strict -

A match establishes equality with the repository metadata value. It does not establish safety or catalog-side artifact retrieval.

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3

Catalog record completeness

The completeness score measures metadata coverage, not software quality, security, compatibility, or suitability.

Summary and description
25/25
Artifact path and source digest
25/25
Dependency metadata
15/15
Package-file index
15/15
Homepage
5/5
License text
0/5
Source package or maintainer
10/10

Recorded total: 95/100

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3. The cross-OS mapping is catalog-derived from the source-reported homepage; it does not establish authorship or publisher identity

Sources and provenance

Field-source links above resolve here. Each source entry names the metadata publisher, trust tier, exact snapshot revision, signature result, and observation time; catalog-derived mappings are labeled separately.

  • Debian 13 (Trixie) main amd64Sep 1, 2026

    Authoritative source; repository metadata signature verified, revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3

    Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.

    Repository-signature verification record
    Signed-object SHA-256
    98b25b5cd185c59d34aa6e4c3e9b5b8f01bbe9d104fe2dcfbcd30dc0a14a59ed
    Signer fingerprint
    4CB50190207B4758A3F73A796ED0E7B82643E131
    Keyring revision
    debian-archive-keyring.gpg
    SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
    Tool and policy
    gpgv (GnuPG) 2.4.9
    openfactory-software-catalog-signature-v1
    Verification time
    Sep 1, 2026
    Signed Release → package-index hash linkage

    Path: main/binary-amd64/Packages.xz
    Expected SHA-256: 3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
    Observed SHA-256: 3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
    Result: match verified

python3-ost Package for Debian 13 (Trixie) | OpenFactory