Debian 13 (Trixie) native package

r-bioc-biobase

base functions for Bioconductor

Packages / Debian 13 (Trixie) / gnu-r / r-bioc-biobase

Package: r-bioc-biobase (2.66.0-2)

Maintainers:

Debian R Packages Maintainers

External Resources:

Homepage: [bioconductor.org]

base functions for Bioconductor

Other Packages Related to r-bioc-biobase:

dep: r-api-4.0
Package not available
dep: r-api-bioc-3.20
Package not available
dep: [r-bioc-biocgenerics] (>= 0.27.1)
generic functions for Bioconductor
dep: [libc6] (>= 2.3)
GNU C Library: Shared libraries

sug: [r-bioc-all]
Bioconductor data package used by several bioc tools
sug: [r-cran-runit]
GNU R package providing unit testing framework
sug: [r-bioc-golubesets]
exprSets for golub leukemia data
sug: [r-bioc-biocstyle]
standard styles for vignettes and other Bioconductor documents
sug: [r-cran-knitr]
GNU R package for dynamic report generation using Literate Programming
sug: [r-bioc-limma]
linear models for microarray data

Download r-bioc-biobase

Architecture	Package Size	Installed Size	Files
amd64	2.2 MiB	4.0 MiB	[list of files]
arm64	2.2 MiB	4.1 MiB	[list of files]

Paketdateipfade (125)

Paths come from the repository package-file index for the observed builds. They describe archive/package associations, not every file that will exist on a running system after maintainer scripts, alternatives, generated state, diversions, or installation choices.

/usr/lib/R/site-library/Biobase/CITATION
/usr/lib/R/site-library/Biobase/Code/DESCRIPTION
/usr/lib/R/site-library/Biobase/Code/man/get@PKGNAME@.Rd
/usr/lib/R/site-library/Biobase/Code/man/@PKGNAME@.Rd
/usr/lib/R/site-library/Biobase/Code/R/get@PKGNAME@.R
/usr/lib/R/site-library/Biobase/data/aaMap.R
/usr/lib/R/site-library/Biobase/data/geneCovariate.rda
/usr/lib/R/site-library/Biobase/data/geneCov.R
/usr/lib/R/site-library/Biobase/data/geneData.R
/usr/lib/R/site-library/Biobase/data/reporter.rda
/usr/lib/R/site-library/Biobase/data/sample.ExpressionSet.rda
/usr/lib/R/site-library/Biobase/data/sample.MultiSet.rda
/usr/lib/R/site-library/Biobase/data/seD.rda
/usr/lib/R/site-library/Biobase/data/SW.rda
/usr/lib/R/site-library/Biobase/DESCRIPTION
/usr/lib/R/site-library/Biobase/doc/BiobaseDevelopment.html
/usr/lib/R/site-library/Biobase/doc/BiobaseDevelopment.R
/usr/lib/R/site-library/Biobase/doc/BiobaseDevelopment.Rmd
/usr/lib/R/site-library/Biobase/doc/esApply.html
/usr/lib/R/site-library/Biobase/doc/esApply.R
/usr/lib/R/site-library/Biobase/doc/esApply.Rmd
/usr/lib/R/site-library/Biobase/doc/ExpressionSetIntroduction.pdf
/usr/lib/R/site-library/Biobase/doc/ExpressionSetIntroduction.R
/usr/lib/R/site-library/Biobase/doc/ExpressionSetIntroduction.Rnw
/usr/lib/R/site-library/Biobase/doc/index.html
/usr/lib/R/site-library/Biobase/ExpressionSet/DESCRIPTION
/usr/lib/R/site-library/Biobase/ExpressionSet/man/@PKGNAME@.Rd
/usr/lib/R/site-library/Biobase/extdata/exprsData.txt
/usr/lib/R/site-library/Biobase/extdata/pData.txt
/usr/lib/R/site-library/Biobase/help/aliases.rds
/usr/lib/R/site-library/Biobase/help/AnIndex
/usr/lib/R/site-library/Biobase/help/Biobase.rdb
/usr/lib/R/site-library/Biobase/help/Biobase.rdx
/usr/lib/R/site-library/Biobase/help/paths.rds
/usr/lib/R/site-library/Biobase/html/00Index.html
/usr/lib/R/site-library/Biobase/html/R.css
/usr/lib/R/site-library/Biobase/INDEX
/usr/lib/R/site-library/Biobase/libs/Biobase.so
/usr/lib/R/site-library/Biobase/Meta/data.rds
/usr/lib/R/site-library/Biobase/Meta/features.rds
/usr/lib/R/site-library/Biobase/Meta/hsearch.rds
/usr/lib/R/site-library/Biobase/Meta/links.rds
/usr/lib/R/site-library/Biobase/Meta/nsInfo.rds
/usr/lib/R/site-library/Biobase/Meta/package.rds
/usr/lib/R/site-library/Biobase/Meta/Rd.rds
/usr/lib/R/site-library/Biobase/Meta/vignette.rds
/usr/lib/R/site-library/Biobase/NAMESPACE
/usr/lib/R/site-library/Biobase/NEWS
/usr/lib/R/site-library/Biobase/R/Biobase
/usr/lib/R/site-library/Biobase/R/Biobase.rdb
/usr/lib/R/site-library/Biobase/R/Biobase.rdx
/usr/lib/R/site-library/Biobase/scripts/esetTesting.R
/usr/lib/R/site-library/Biobase/scripts/getBioCHelp
/usr/lib/R/site-library/Biobase/scripts/getBioCPkgNames.R
/usr/lib/R/site-library/Biobase/scripts/getBioC.R
/usr/lib/R/site-library/Biobase/scripts/makeExpressionSetPackage.R
/usr/lib/R/site-library/Biobase/scripts/query.packages.R
/usr/lib/R/site-library/Biobase/testClass.R
/usr/lib/R/site-library/Biobase/unitTests/test_AnnotatedDataFrame.R
/usr/lib/R/site-library/Biobase/unitTests/test_AssayData.R
/usr/lib/R/site-library/Biobase/unitTests/test_cache.R
/usr/lib/R/site-library/Biobase/unitTests/test_checkClass.R
/usr/lib/R/site-library/Biobase/unitTests/test_combine.R
/usr/lib/R/site-library/Biobase/unitTests/test_copyEnv.R
/usr/lib/R/site-library/Biobase/unitTests/test_DataClasses.R
/usr/lib/R/site-library/Biobase/unitTests/test_esApply.R
/usr/lib/R/site-library/Biobase/unitTests/test_EsetSubclasses.R
/usr/lib/R/site-library/Biobase/unitTests/test_ExpressionSet.R
/usr/lib/R/site-library/Biobase/unitTests/test_NChannelSet.R
/usr/lib/R/site-library/Biobase/unitTests/test_SnpSet.R
/usr/lib/R/site-library/Biobase/unitTests/test_subListExtract.R
/usr/lib/R/site-library/Biobase/unitTests/test_unsaveSetSlot.R
/usr/lib/R/site-library/Biobase/unitTests/test_UpdateObject.R
/usr/lib/R/site-library/Biobase/unitTests/test_VersionedClass.R
/usr/lib/R/site-library/Biobase/unitTests/utilities.R
/usr/lib/R/site-library/Biobase/unitTests/VersionedClass_data/1.8/AnnotatedDataFrame.Rda
/usr/lib/R/site-library/Biobase/unitTests/VersionedClass_data/1.8/ExpressionSet.Rda
/usr/lib/R/site-library/Biobase/unitTests/VersionedClass_data/1.8/exprSet.Rda
/usr/lib/R/site-library/Biobase/unitTests/VersionedClass_data/1.8/MIAME.Rda
/usr/lib/R/site-library/Biobase/unitTests/VersionedClass_data/1.8/phenoData.Rda
/usr/lib/R/site-library/Biobase/unitTests/VersionedClass_data/2.0/aggregator.Rda
/usr/lib/R/site-library/Biobase/unitTests/VersionedClass_data/2.0/AnnotatedDataFrame.Rda
/usr/lib/R/site-library/Biobase/unitTests/VersionedClass_data/2.0/container.Rda
/usr/lib/R/site-library/Biobase/unitTests/VersionedClass_data/2.0/ExpressionSet.Rda
/usr/lib/R/site-library/Biobase/unitTests/VersionedClass_data/2.0/exprSet.Rda
/usr/lib/R/site-library/Biobase/unitTests/VersionedClass_data/2.0/MIAME.Rda
/usr/lib/R/site-library/Biobase/unitTests/VersionedClass_data/2.0/MultiSet.Rda
/usr/lib/R/site-library/Biobase/unitTests/VersionedClass_data/2.0/phenoData.Rda
/usr/lib/R/site-library/Biobase/unitTests/VersionedClass_data/2.0/ScalarCharacter.Rda
/usr/lib/R/site-library/Biobase/unitTests/VersionedClass_data/2.0/SnpSet.Rda
/usr/lib/R/site-library/Biobase/unitTests/VersionedClass_data/2.0/VersionedBiobase.Rda
/usr/lib/R/site-library/Biobase/unitTests/VersionedClass_data/2.0/Versioned.Rda
/usr/lib/R/site-library/Biobase/unitTests/VersionedClass_data/2.0/VersionsNull.Rda
/usr/lib/R/site-library/Biobase/unitTests/VersionedClass_data/2.0/Versions.Rda
/usr/lib/R/site-library/Biobase/unitTests/VersionedClass_data/devel/aggregator.Rda
/usr/lib/R/site-library/Biobase/unitTests/VersionedClass_data/devel/AnnotatedDataFrame.Rda
/usr/lib/R/site-library/Biobase/unitTests/VersionedClass_data/devel/bbsym.rda
/usr/lib/R/site-library/Biobase/unitTests/VersionedClass_data/devel/container.Rda
/usr/lib/R/site-library/Biobase/unitTests/VersionedClass_data/devel/eset.rda
/usr/lib/R/site-library/Biobase/unitTests/VersionedClass_data/devel/ExpressionSet.Rda
/usr/lib/R/site-library/Biobase/unitTests/VersionedClass_data/devel/exprSet.Rda
/usr/lib/R/site-library/Biobase/unitTests/VersionedClass_data/devel/golubMergeSub.rda
/usr/lib/R/site-library/Biobase/unitTests/VersionedClass_data/devel/MIAME.Rda
/usr/lib/R/site-library/Biobase/unitTests/VersionedClass_data/devel/MultiSet.Rda
/usr/lib/R/site-library/Biobase/unitTests/VersionedClass_data/devel/NChannelSet.Rda
/usr/lib/R/site-library/Biobase/unitTests/VersionedClass_data/devel/sample.eSet.rda
/usr/lib/R/site-library/Biobase/unitTests/VersionedClass_data/devel/sample.exprSet.1.rda
/usr/lib/R/site-library/Biobase/unitTests/VersionedClass_data/devel/sample.exprSet.rda
/usr/lib/R/site-library/Biobase/unitTests/VersionedClass_data/devel/ScalarCharacter.Rda
/usr/lib/R/site-library/Biobase/unitTests/VersionedClass_data/devel/ScalarInteger.Rda
/usr/lib/R/site-library/Biobase/unitTests/VersionedClass_data/devel/ScalarLogical.Rda
/usr/lib/R/site-library/Biobase/unitTests/VersionedClass_data/devel/ScalarNumeric.Rda
/usr/lib/R/site-library/Biobase/unitTests/VersionedClass_data/devel/SnpSet.Rda
/usr/lib/R/site-library/Biobase/unitTests/VersionedClass_data/devel/SWPD.rda
/usr/lib/R/site-library/Biobase/unitTests/VersionedClass_data/devel/swrep.rda
/usr/lib/R/site-library/Biobase/unitTests/VersionedClass_data/devel/VersionedBiobase.Rda
/usr/lib/R/site-library/Biobase/unitTests/VersionedClass_data/devel/Versioned.Rda
/usr/lib/R/site-library/Biobase/unitTests/VersionedClass_data/devel/VersionsNull.Rda
/usr/lib/R/site-library/Biobase/unitTests/VersionedClass_data/devel/Versions.Rda
/usr/lib/R/site-library/Biobase/unitTests/VersionedClass_data/raw/exprs.tab
/usr/lib/R/site-library/Biobase/unitTests/VersionedClass_data/raw/pData.tab
/usr/lib/R/site-library/Biobase/unitTests/VersionedClass_data/raw/varMetadata.tab
/usr/share/doc/r-bioc-biobase/changelog.Debian.gz
/usr/share/doc/r-bioc-biobase/copyright
/usr/share/doc/r-bioc-biobase/NEWS.gz

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3

Dieses Paket verwenden

OpenFactory kann dieses Betriebssystem in einer Browser-VM starten oder einen Image-Build mit dem nativen Paketnamen aus diesem Datensatz beginnen.

Debian 13 (Trixie) im Browser testen Image mit r-bioc-biobase bauen

Versionen, Suiten und Repositories

Jede Zeile ist Paketindex-Metadaten für eine Version, Architektur, Suite und ein Repository. Namen, URLs und Größen stammen aus der Quelle; ein Link ist ein veränderbarer Abrufort, kein Weitergabanspruch von OpenFactory.

Version	Release	Architecture	Repository	Package size	Installed size	Publisher repository artifact
2.66.0-2	trixie / main	amd64	Debian 13 · main · amd64	2.2 MiB	4.0 MiB	pool/main/r/r-bioc-biobase/r-bioc-biobase_2.66.0-2_amd64.deb
2.66.0-2	trixie / main	arm64	Debian 13 · main · arm64	2.2 MiB	4.1 MiB	pool/main/r/r-bioc-biobase/r-bioc-biobase_2.66.0-2_arm64.deb

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3

Prüfsummen und Beobachtungsdaten

For an APT source, signature verification authenticates the repository metadata chain and the Packages index containing this source-reported artifact digest. It does not certify package safety.

2.66.0-2 / amd64Observed Sep 1, 2026 to Sep 1, 2026

Verification status: Metadata observed; artifact bytes were not independently fetched or hashed by this catalog import. The digest below is source-reported.

Source-reported sha256: c62eff2ab12633c0886d56d4080a9ceb4265429e7e402d287e58b9f705bfd814

After downloading that exact artifact, compare its bytes with the source-reported expected digest:

printf '%s  %s\n' 'c62eff2ab12633c0886d56d4080a9ceb4265429e7e402d287e58b9f705bfd814' 'r-bioc-biobase_2.66.0-2_amd64.deb' | sha256sum --check --strict -

A match establishes equality with the repository metadata value. It does not establish safety or catalog-side artifact retrieval.

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3

2.66.0-2 / arm64Observed Sep 1, 2026 to Sep 1, 2026

Verification status: Metadata observed; artifact bytes were not independently fetched or hashed by this catalog import. The digest below is source-reported.

Source-reported sha256: 33ecf3b75ff90efb3aee0cb8eb3bcb9ac0bf078375fd489ad1be420503f18d38

After downloading that exact artifact, compare its bytes with the source-reported expected digest:

printf '%s  %s\n' '33ecf3b75ff90efb3aee0cb8eb3bcb9ac0bf078375fd489ad1be420503f18d38' 'r-bioc-biobase_2.66.0-2_arm64.deb' | sha256sum --check --strict -

A match establishes equality with the repository metadata value. It does not establish safety or catalog-side artifact retrieval.

Field source: Debian 13 (Trixie) main arm64 revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908

Vollständigkeit des Katalogsatzes

The completeness score measures metadata coverage, not software quality, security, compatibility, or suitability.

Summary and description: 25/25
Artifact path and source digest: 25/25
Dependency metadata: 15/15
Package-file index: 15/15
Homepage: 5/5
License text: 0/5
Source package or maintainer: 10/10

Recorded total: 95/100

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3, Debian 13 (Trixie) main arm64 revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908. The cross-OS mapping is catalog-derived from the source-reported homepage; it does not establish authorship or publisher identity

Quellen und Herkunft

Field-source links above resolve here. Each source entry names the metadata publisher, trust tier, exact snapshot revision, signature result, and observation time; catalog-derived mappings are labeled separately.

Debian 13 (Trixie) main amd64Sep 1, 2026
Authoritative source; repository metadata signature verified, revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.
Repository-signature verification record
Signed object
https://deb.debian.org/debian/dists/trixie/InRelease
Signed-object SHA-256
98b25b5cd185c59d34aa6e4c3e9b5b8f01bbe9d104fe2dcfbcd30dc0a14a59ed
Signer fingerprint
4CB50190207B4758A3F73A796ED0E7B82643E131
Keyring revision
debian-archive-keyring.gpg
SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
Tool and policy
gpgv (GnuPG) 2.4.9
openfactory-software-catalog-signature-v1
Verification time
Sep 1, 2026
Signed Release → package-index hash linkage
Path: main/binary-amd64/Packages.xz
Expected SHA-256: 3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
Observed SHA-256: 3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
Result: match verified
Debian 13 (Trixie) main arm64Sep 1, 2026
Authoritative source; repository metadata signature verified, revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908
Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.
Repository-signature verification record
Signed object
https://deb.debian.org/debian/dists/trixie/InRelease
Signed-object SHA-256
98b25b5cd185c59d34aa6e4c3e9b5b8f01bbe9d104fe2dcfbcd30dc0a14a59ed
Signer fingerprint
4CB50190207B4758A3F73A796ED0E7B82643E131
Keyring revision
debian-archive-keyring.gpg
SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
Tool and policy
gpgv (GnuPG) 2.4.9
openfactory-software-catalog-signature-v1
Verification time
Sep 1, 2026
Signed Release → package-index hash linkage
Path: main/binary-arm64/Packages.xz
Expected SHA-256: 753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908
Observed SHA-256: 753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908
Result: match verified