Debian 13 (Trixie) native package

r-bioc-iranges

GNU R low-level containers for storing sets of integer ranges

Packages / Debian 13 (Trixie) / gnu-r / r-bioc-iranges

Package: r-bioc-iranges (2.40.1-3)

Maintainers:

Debian R Packages Maintainers

External Resources:

Homepage: [bioconductor.org]

GNU R low-level containers for storing sets of integer ranges

Other Packages Related to r-bioc-iranges:

dep: r-api-4.0
Package not available
dep: r-api-bioc-3.20
Package not available
dep: [r-bioc-biocgenerics] (>= 0.39.2)
generic functions for Bioconductor
dep: [r-bioc-s4vectors] (>= 0.43.2)
BioConductor S4 implementation of vectors and lists
dep: [libc6] (>= 2.14)
GNU C Library: Shared libraries

sug: [r-bioc-xvector]
BioConductor representation and manpulation of external sequences
sug: [r-bioc-genomicranges]
BioConductor representation and manipulation of genomic intervals
sug: [r-bioc-rsamtools]
GNU R binary alignment (BAM), variant call (BCF), or tabix file import
sug: [r-bioc-genomicalignments]
BioConductor representation and manipulation of short genomic alignments
sug: [r-bioc-genomicfeatures]
GNU R tools for making and manipulating transcript centric annotations
sug: [r-cran-runit]
GNU R package providing unit testing framework
sug: [r-bioc-biocstyle]
standard styles for vignettes and other Bioconductor documents

Download r-bioc-iranges

Architecture	Package Size	Installed Size	Files
amd64	2.2 MiB	3.4 MiB	[list of files]
arm64	2.2 MiB	3.4 MiB	[list of files]

Package file paths (62)

Paths come from the repository package-file index for the observed builds. They describe archive/package associations, not every file that will exist on a running system after maintainer scripts, alternatives, generated state, diversions, or installation choices.

/usr/lib/R/site-library/IRanges/CITATION
/usr/lib/R/site-library/IRanges/DESCRIPTION
/usr/lib/R/site-library/IRanges/doc/index.html
/usr/lib/R/site-library/IRanges/doc/IRangesOverview.pdf
/usr/lib/R/site-library/IRanges/doc/IRangesOverview.R
/usr/lib/R/site-library/IRanges/doc/IRangesOverview.Rnw
/usr/lib/R/site-library/IRanges/extdata/ce2chrM.bed
/usr/lib/R/site-library/IRanges/extdata/ce2chrM.fa.out
/usr/lib/R/site-library/IRanges/extdata/hg18liftAll.lft
/usr/lib/R/site-library/IRanges/extdata/hs_b36v3_chrY.agp
/usr/lib/R/site-library/IRanges/help/aliases.rds
/usr/lib/R/site-library/IRanges/help/AnIndex
/usr/lib/R/site-library/IRanges/help/IRanges.rdb
/usr/lib/R/site-library/IRanges/help/IRanges.rdx
/usr/lib/R/site-library/IRanges/help/paths.rds
/usr/lib/R/site-library/IRanges/html/00Index.html
/usr/lib/R/site-library/IRanges/html/R.css
/usr/lib/R/site-library/IRanges/include/IRanges_defines.h
/usr/lib/R/site-library/IRanges/include/IRanges_interface.h
/usr/lib/R/site-library/IRanges/include/_IRanges_stubs.c
/usr/lib/R/site-library/IRanges/INDEX
/usr/lib/R/site-library/IRanges/libs/IRanges.so
/usr/lib/R/site-library/IRanges/Meta/features.rds
/usr/lib/R/site-library/IRanges/Meta/hsearch.rds
/usr/lib/R/site-library/IRanges/Meta/links.rds
/usr/lib/R/site-library/IRanges/Meta/nsInfo.rds
/usr/lib/R/site-library/IRanges/Meta/package.rds
/usr/lib/R/site-library/IRanges/Meta/Rd.rds
/usr/lib/R/site-library/IRanges/Meta/vignette.rds
/usr/lib/R/site-library/IRanges/NAMESPACE
/usr/lib/R/site-library/IRanges/NEWS
/usr/lib/R/site-library/IRanges/R/IRanges
/usr/lib/R/site-library/IRanges/R/IRanges.rdb
/usr/lib/R/site-library/IRanges/R/IRanges.rdx
/usr/lib/R/site-library/IRanges/unitTests/test_AtomicList-class.R
/usr/lib/R/site-library/IRanges/unitTests/test_AtomicList-utils.R
/usr/lib/R/site-library/IRanges/unitTests/test_coverage-methods.R
/usr/lib/R/site-library/IRanges/unitTests/test_DataFrameList.R
/usr/lib/R/site-library/IRanges/unitTests/test_DataFrame-utils.R
/usr/lib/R/site-library/IRanges/unitTests/test_extractList.R
/usr/lib/R/site-library/IRanges/unitTests/test_findOverlaps-methods.R
/usr/lib/R/site-library/IRanges/unitTests/test_Grouping-class.R
/usr/lib/R/site-library/IRanges/unitTests/test_HitsList.R
/usr/lib/R/site-library/IRanges/unitTests/test_inter-range-methods.R
/usr/lib/R/site-library/IRanges/unitTests/test_intra-range-methods.R
/usr/lib/R/site-library/IRanges/unitTests/test_IPos-class.R
/usr/lib/R/site-library/IRanges/unitTests/test_IRanges-class.R
/usr/lib/R/site-library/IRanges/unitTests/test_IRanges-constructor.R
/usr/lib/R/site-library/IRanges/unitTests/test_IRangesList-class.R
/usr/lib/R/site-library/IRanges/unitTests/test_NCList-class.R
/usr/lib/R/site-library/IRanges/unitTests/test_nearest-methods.R
/usr/lib/R/site-library/IRanges/unitTests/test_Ranges-comparison.R
/usr/lib/R/site-library/IRanges/unitTests/test_RleViewsList.R
/usr/lib/R/site-library/IRanges/unitTests/test_RleViews.R
/usr/lib/R/site-library/IRanges/unitTests/test_seqapply.R
/usr/lib/R/site-library/IRanges/unitTests/test_setops-methods.R
/usr/lib/R/site-library/IRanges/unitTests/test_splitListElements.R
/usr/lib/R/site-library/IRanges/unitTests/test_split.R
/usr/lib/R/site-library/IRanges/unitTests/test_tile-methods.R
/usr/share/doc/r-bioc-iranges/changelog.Debian.gz
/usr/share/doc/r-bioc-iranges/copyright
/usr/share/doc/r-bioc-iranges/IRangesOverview.pdf

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3

Use this package

OpenFactory can boot this operating system in a browser VM, or start a build that includes the native package name from this record.

Try Debian 13 (Trixie) in the browser Build an image that includes r-bioc-iranges

Versions, suites, and repositories

Each row is recorded package-index metadata for one version, architecture, suite, and repository. Names, URLs, and sizes are source-reported; a link is a potentially mutable retrieval location, not an OpenFactory redistribution claim or proof that OpenFactory retained the artifact bytes.

Version	Release	Architecture	Repository	Package size	Installed size	Publisher repository artifact
2.40.1-3	trixie / main	amd64	Debian 13 · main · amd64	2.2 MiB	3.4 MiB	pool/main/r/r-bioc-iranges/r-bioc-iranges_2.40.1-3_amd64.deb
2.40.1-3	trixie / main	arm64	Debian 13 · main · arm64	2.2 MiB	3.4 MiB	pool/main/r/r-bioc-iranges/r-bioc-iranges_2.40.1-3_arm64.deb

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3

Checksums and observation dates

For an APT source, signature verification authenticates the repository metadata chain and the Packages index containing this source-reported artifact digest. It does not certify package safety.

2.40.1-3 / amd64Observed Sep 1, 2026 to Sep 1, 2026

Verification status: Metadata observed; artifact bytes were not independently fetched or hashed by this catalog import. The digest below is source-reported.

Source-reported sha256: 9f912ae1a1f3225782846ab62e1ae5e25dc04d59b0a543ee01d4fec93f86f70e

After downloading that exact artifact, compare its bytes with the source-reported expected digest:

printf '%s  %s\n' '9f912ae1a1f3225782846ab62e1ae5e25dc04d59b0a543ee01d4fec93f86f70e' 'r-bioc-iranges_2.40.1-3_amd64.deb' | sha256sum --check --strict -

A match establishes equality with the repository metadata value. It does not establish safety or catalog-side artifact retrieval.

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3

2.40.1-3 / arm64Observed Sep 1, 2026 to Sep 1, 2026

Verification status: Metadata observed; artifact bytes were not independently fetched or hashed by this catalog import. The digest below is source-reported.

Source-reported sha256: fcc37dc0545cb3c76cfb7caebc717fff6d5934d778fad229c205233cffab8875

After downloading that exact artifact, compare its bytes with the source-reported expected digest:

printf '%s  %s\n' 'fcc37dc0545cb3c76cfb7caebc717fff6d5934d778fad229c205233cffab8875' 'r-bioc-iranges_2.40.1-3_arm64.deb' | sha256sum --check --strict -

A match establishes equality with the repository metadata value. It does not establish safety or catalog-side artifact retrieval.

Field source: Debian 13 (Trixie) main arm64 revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908

Catalog record completeness

The completeness score measures metadata coverage, not software quality, security, compatibility, or suitability.

Summary and description: 25/25
Artifact path and source digest: 25/25
Dependency metadata: 15/15
Package-file index: 15/15
Homepage: 5/5
License text: 0/5
Source package or maintainer: 10/10

Recorded total: 95/100

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3, Debian 13 (Trixie) main arm64 revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908. The cross-OS mapping is catalog-derived from the source-reported homepage; it does not establish authorship or publisher identity

Sources and provenance

Field-source links above resolve here. Each source entry names the metadata publisher, trust tier, exact snapshot revision, signature result, and observation time; catalog-derived mappings are labeled separately.

Debian 13 (Trixie) main amd64Sep 1, 2026
Authoritative source; repository metadata signature verified, revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.
Repository-signature verification record
Signed object
https://deb.debian.org/debian/dists/trixie/InRelease
Signed-object SHA-256
98b25b5cd185c59d34aa6e4c3e9b5b8f01bbe9d104fe2dcfbcd30dc0a14a59ed
Signer fingerprint
4CB50190207B4758A3F73A796ED0E7B82643E131
Keyring revision
debian-archive-keyring.gpg
SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
Tool and policy
gpgv (GnuPG) 2.4.9
openfactory-software-catalog-signature-v1
Verification time
Sep 1, 2026
Signed Release → package-index hash linkage
Path: main/binary-amd64/Packages.xz
Expected SHA-256: 3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
Observed SHA-256: 3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
Result: match verified
Debian 13 (Trixie) main arm64Sep 1, 2026
Authoritative source; repository metadata signature verified, revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908
Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.
Repository-signature verification record
Signed object
https://deb.debian.org/debian/dists/trixie/InRelease
Signed-object SHA-256
98b25b5cd185c59d34aa6e4c3e9b5b8f01bbe9d104fe2dcfbcd30dc0a14a59ed
Signer fingerprint
4CB50190207B4758A3F73A796ED0E7B82643E131
Keyring revision
debian-archive-keyring.gpg
SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
Tool and policy
gpgv (GnuPG) 2.4.9
openfactory-software-catalog-signature-v1
Verification time
Sep 1, 2026
Signed Release → package-index hash linkage
Path: main/binary-arm64/Packages.xz
Expected SHA-256: 753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908
Observed SHA-256: 753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908
Result: match verified