Debian 13 (Trixie) native package

r-bioc-variantannotation

BioConductor annotation of genetic variants

Packages / Debian 13 (Trixie) / gnu-r / r-bioc-variantannotation

Package: r-bioc-variantannotation

Maintainers:

Debian R Packages Maintainers

External Resources:

Homepage: [bioconductor.org]

BioConductor annotation of genetic variants

Жоден опублікований запис не відповідає цьому фільтру набору та архітектури.

Шляхи файлів пакета (76)

Paths come from the repository package-file index for the observed builds. They describe archive/package associations, not every file that will exist on a running system after maintainer scripts, alternatives, generated state, diversions, or installation choices.

/usr/lib/R/site-library/VariantAnnotation/CITATION
/usr/lib/R/site-library/VariantAnnotation/DESCRIPTION
/usr/lib/R/site-library/VariantAnnotation/doc/ensemblVEP.html
/usr/lib/R/site-library/VariantAnnotation/doc/ensemblVEP.R
/usr/lib/R/site-library/VariantAnnotation/doc/ensemblVEP.Rmd
/usr/lib/R/site-library/VariantAnnotation/doc/filterVcf.html
/usr/lib/R/site-library/VariantAnnotation/doc/filterVcf.R
/usr/lib/R/site-library/VariantAnnotation/doc/filterVcf.Rmd
/usr/lib/R/site-library/VariantAnnotation/doc/index.html
/usr/lib/R/site-library/VariantAnnotation/doc/VariantAnnotation.html
/usr/lib/R/site-library/VariantAnnotation/doc/VariantAnnotation.R
/usr/lib/R/site-library/VariantAnnotation/doc/VariantAnnotation.Rmd
/usr/lib/R/site-library/VariantAnnotation/extdata/chr22.vcf.gz
/usr/lib/R/site-library/VariantAnnotation/extdata/chr22.vcf.gz.tbi
/usr/lib/R/site-library/VariantAnnotation/extdata/chr7-sub.vcf.gz
/usr/lib/R/site-library/VariantAnnotation/extdata/chr7-sub.vcf.gz.tbi
/usr/lib/R/site-library/VariantAnnotation/extdata/ex2.vcf
/usr/lib/R/site-library/VariantAnnotation/extdata/gl_chr1.vcf
/usr/lib/R/site-library/VariantAnnotation/extdata/h1187-10k.vcf.gz
/usr/lib/R/site-library/VariantAnnotation/extdata/h1187-10k.vcf.gz.tbi
/usr/lib/R/site-library/VariantAnnotation/extdata/hapmap_exome_chr22.vcf.gz
/usr/lib/R/site-library/VariantAnnotation/extdata/hapmap_exome_chr22.vcf.gz.tbi
/usr/lib/R/site-library/VariantAnnotation/extdata/structural.vcf
/usr/lib/R/site-library/VariantAnnotation/help/aliases.rds
/usr/lib/R/site-library/VariantAnnotation/help/AnIndex
/usr/lib/R/site-library/VariantAnnotation/help/paths.rds
/usr/lib/R/site-library/VariantAnnotation/help/VariantAnnotation.rdb
/usr/lib/R/site-library/VariantAnnotation/help/VariantAnnotation.rdx
/usr/lib/R/site-library/VariantAnnotation/html/00Index.html
/usr/lib/R/site-library/VariantAnnotation/html/R.css
/usr/lib/R/site-library/VariantAnnotation/INDEX
/usr/lib/R/site-library/VariantAnnotation/libs/VariantAnnotation.so
/usr/lib/R/site-library/VariantAnnotation/Meta/features.rds
/usr/lib/R/site-library/VariantAnnotation/Meta/hsearch.rds
/usr/lib/R/site-library/VariantAnnotation/Meta/links.rds
/usr/lib/R/site-library/VariantAnnotation/Meta/nsInfo.rds
/usr/lib/R/site-library/VariantAnnotation/Meta/package.rds
/usr/lib/R/site-library/VariantAnnotation/Meta/Rd.rds
/usr/lib/R/site-library/VariantAnnotation/Meta/vignette.rds
/usr/lib/R/site-library/VariantAnnotation/NAMESPACE
/usr/lib/R/site-library/VariantAnnotation/NEWS
/usr/lib/R/site-library/VariantAnnotation/R/VariantAnnotation
/usr/lib/R/site-library/VariantAnnotation/R/VariantAnnotation.rdb
/usr/lib/R/site-library/VariantAnnotation/R/VariantAnnotation.rdx
/usr/lib/R/site-library/VariantAnnotation/scripts/test_Rplinkseq.R
/usr/lib/R/site-library/VariantAnnotation/unitTests/cases/banded_gvcf.vcf
/usr/lib/R/site-library/VariantAnnotation/unitTests/cases/buffer_realloc.vcf
/usr/lib/R/site-library/VariantAnnotation/unitTests/cases/ex1-seq1-90.vcf
/usr/lib/R/site-library/VariantAnnotation/unitTests/cases/expand.vcf
/usr/lib/R/site-library/VariantAnnotation/unitTests/cases/fewer-FORMAT-than-GENO.vcf
/usr/lib/R/site-library/VariantAnnotation/unitTests/cases/FORMAT_header_no_SAMPLEs.vcf
/usr/lib/R/site-library/VariantAnnotation/unitTests/cases/meta_header.vcf
/usr/lib/R/site-library/VariantAnnotation/unitTests/cases/missing-FORMAT-metadata-elt.vcf
/usr/lib/R/site-library/VariantAnnotation/unitTests/cases/mixedStructural.vcf
/usr/lib/R/site-library/VariantAnnotation/unitTests/cases/multiple_INFO_fields.vcf
/usr/lib/R/site-library/VariantAnnotation/unitTests/cases/negative_FORMAT_Number.vcf
/usr/lib/R/site-library/VariantAnnotation/unitTests/cases/no_FORMAT_column.vcf
/usr/lib/R/site-library/VariantAnnotation/unitTests/cases/no_GENO_row.vcf
/usr/lib/R/site-library/VariantAnnotation/unitTests/cases/no_INFO_header.vcf
/usr/lib/R/site-library/VariantAnnotation/unitTests/cases/unspecified_INFO_FORMAT_fields.vcf
/usr/lib/R/site-library/VariantAnnotation/unitTests/cases/VarScan_header.vcf
/usr/lib/R/site-library/VariantAnnotation/unitTests/test_expand-methods.R
/usr/lib/R/site-library/VariantAnnotation/unitTests/test_filterVcf.R
/usr/lib/R/site-library/VariantAnnotation/unitTests/test_genotypeToSnpMatrix.R
/usr/lib/R/site-library/VariantAnnotation/unitTests/test_isSNV.R
/usr/lib/R/site-library/VariantAnnotation/unitTests/test_readVcf-methods.R
/usr/lib/R/site-library/VariantAnnotation/unitTests/test_ScanVcfParam-class.R
/usr/lib/R/site-library/VariantAnnotation/unitTests/test_scanVcf.R
/usr/lib/R/site-library/VariantAnnotation/unitTests/test_snpSummary.R
/usr/lib/R/site-library/VariantAnnotation/unitTests/test_summarizeVariants-methods.R
/usr/lib/R/site-library/VariantAnnotation/unitTests/test_VCF-class.R
/usr/lib/R/site-library/VariantAnnotation/unitTests/test_vcfFields.R
/usr/lib/R/site-library/VariantAnnotation/unitTests/test_VRanges-class.R
/usr/lib/R/site-library/VariantAnnotation/unitTests/test_writeVcf-methods.R
/usr/share/doc/r-bioc-variantannotation/changelog.Debian.gz
/usr/share/doc/r-bioc-variantannotation/copyright

Версії, набори та репозиторії

Кожен рядок: метадані індексу пакетів для однієї версії, архітектури, набору й репозиторію. Назви, URL і розміри зі джерела; посилання є змінним місцем отримання, не перерозповсюдженням OpenFactory.

Жоден опублікований запис не відповідає цьому фільтру набору та архітектури.

Контрольні суми й дати спостереження

For an APT source, signature verification authenticates the repository metadata chain and the Packages index containing this source-reported artifact digest. It does not certify package safety.

Повнота запису каталогу

The completeness score measures metadata coverage, not software quality, security, compatibility, or suitability.

Summary and description: 25/25
Artifact path and source digest: 25/25
Dependency metadata: 15/15
Package-file index: 15/15
Homepage: 5/5
License text: 0/5
Source package or maintainer: 10/10

Recorded total: 95/100

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3, Debian 13 (Trixie) main arm64 revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908. The cross-OS mapping is catalog-derived from the source-reported homepage; it does not establish authorship or publisher identity

Джерела та походження

Field-source links above resolve here. Each source entry names the metadata publisher, trust tier, exact snapshot revision, signature result, and observation time; catalog-derived mappings are labeled separately.

Debian 13 (Trixie) main amd64Sep 1, 2026
Authoritative source; repository metadata signature verified, revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.
Repository-signature verification record
Signed object
https://deb.debian.org/debian/dists/trixie/InRelease
Signed-object SHA-256
98b25b5cd185c59d34aa6e4c3e9b5b8f01bbe9d104fe2dcfbcd30dc0a14a59ed
Signer fingerprint
4CB50190207B4758A3F73A796ED0E7B82643E131
Keyring revision
debian-archive-keyring.gpg
SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
Tool and policy
gpgv (GnuPG) 2.4.9
openfactory-software-catalog-signature-v1
Verification time
Sep 1, 2026
Signed Release → package-index hash linkage
Path: main/binary-amd64/Packages.xz
Expected SHA-256: 3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
Observed SHA-256: 3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
Result: match verified
Debian 13 (Trixie) main arm64Sep 1, 2026
Authoritative source; repository metadata signature verified, revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908
Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.
Repository-signature verification record
Signed object
https://deb.debian.org/debian/dists/trixie/InRelease
Signed-object SHA-256
98b25b5cd185c59d34aa6e4c3e9b5b8f01bbe9d104fe2dcfbcd30dc0a14a59ed
Signer fingerprint
4CB50190207B4758A3F73A796ED0E7B82643E131
Keyring revision
debian-archive-keyring.gpg
SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
Tool and policy
gpgv (GnuPG) 2.4.9
openfactory-software-catalog-signature-v1
Verification time
Sep 1, 2026
Signed Release → package-index hash linkage
Path: main/binary-arm64/Packages.xz
Expected SHA-256: 753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908
Observed SHA-256: 753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908
Result: match verified