Fedora 44 native package

bcftools

Tools for genomic variant calling and manipulating VCF/BCF files

Packages / Fedora 44 / Unspecified / bcftools

[Source: bcftools]

Package: bcftools (1.23.1-1.fc44)

[Project overview: samtools-legacy]

External Resources:

Homepage: [www.htslib.org]

Tools for genomic variant calling and manipulating VCF/BCF files

BCFtools is a set of utilities that manipulate genomic variant calls in the Variant Call Format (VCF) and its binary counterpart (BCF). All commands work transparently with both VCFs and BCFs, both uncompressed and BGZF-compressed. (This BCFtools includes the polysomy subcommand, which is implemented using the GNU Scientific Library. Hence this package is licensed according to the GNU General Public License, rather than the MIT license used when BCFtools is built without the polysomy subcommand.)

Other Packages Related to bcftools:

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dep: ld-linux-aarch64.so.1()(64bit)
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dep: ld-linux-aarch64.so.1(GLIBC_2.17)(64bit)
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dep: libgsl.so.28()(64bit)
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dep: libgslcblas.so.0()(64bit)
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dep: libhts.so.3()(64bit)
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dep: libhts.so.3(HTSLIB_1.0)(64bit)
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dep: libhts.so.3(HTSLIB_1.1)(64bit)
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dep: libhts.so.3(HTSLIB_1.10)(64bit)
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dep: libhts.so.3(HTSLIB_1.13)(64bit)
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dep: libhts.so.3(HTSLIB_1.16)(64bit)
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dep: libhts.so.3(HTSLIB_1.17)(64bit)
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dep: libhts.so.3(HTSLIB_1.2.1)(64bit)
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dep: libhts.so.3(HTSLIB_1.22)(64bit)
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dep: libhts.so.3(HTSLIB_1.3)(64bit)
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dep: libhts.so.3(HTSLIB_1.4)(64bit)
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dep: libhts.so.3(HTSLIB_1.5)(64bit)
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dep: libhts.so.3(HTSLIB_1.6)(64bit)
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dep: libhts.so.3(HTSLIB_1.7)(64bit)
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dep: libm.so.6()(64bit)
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dep: libm.so.6(GLIBC_2.17)(64bit)
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dep: libm.so.6(GLIBC_2.23)(64bit)
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dep: libm.so.6(GLIBC_2.29)(64bit)
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dep: libm.so.6(GLIBC_2.43)(64bit)
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dep: libperl.so.5.42()(64bit)
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dep: rtld(GNU_HASH)
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dep: libc.so.6(GLIBC_2.38)(64bit)
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Download bcftools

Architecture	Package Size	Installed Size	Files
aarch64	983 KiB	4.4 MiB	[list of files]
x86_64	1.0 MiB	3.1 MiB	[list of files]

Rutas de archivos del paquete (211)

Paths come from the repository package-file index for the observed builds. They describe archive/package associations, not every file that will exist on a running system after maintainer scripts, alternatives, generated state, diversions, or installation choices.

/usr/bin/bcftools
/usr/bin/color-chrs.pl
/usr/bin/gff2gff
/usr/bin/gff2gff.py
/usr/bin/guess-ploidy.py
/usr/bin/plot-roh.py
/usr/bin/plot-vcfstats
/usr/bin/roh-viz
/usr/bin/run-roh.pl
/usr/bin/vcfutils.pl
/usr/bin/vrfs-variances
/usr/lib/.build-id
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/usr/libexec/bcftools
/usr/libexec/bcftools/ad-bias.so
/usr/libexec/bcftools/add-variantkey.so
/usr/libexec/bcftools/af-dist.so
/usr/libexec/bcftools/allele-length.so
/usr/libexec/bcftools/check-ploidy.so
/usr/libexec/bcftools/check-sparsity.so
/usr/libexec/bcftools/color-chrs.so
/usr/libexec/bcftools/contrast.so
/usr/libexec/bcftools/counts.so
/usr/libexec/bcftools/dosage.so
/usr/libexec/bcftools/fill-AN-AC.so
/usr/libexec/bcftools/fill-from-fasta.so
/usr/libexec/bcftools/fill-tags.so
/usr/libexec/bcftools/fixploidy.so
/usr/libexec/bcftools/fixref.so
/usr/libexec/bcftools/frameshifts.so
/usr/libexec/bcftools/GTisec.so
/usr/libexec/bcftools/GTsubset.so
/usr/libexec/bcftools/guess-ploidy.so
/usr/libexec/bcftools/gvcfz.so
/usr/libexec/bcftools/impute-info.so
/usr/libexec/bcftools/indel-stats.so
/usr/libexec/bcftools/isecGT.so
/usr/libexec/bcftools/mendelian2.so
/usr/libexec/bcftools/missing2ref.so
/usr/libexec/bcftools/parental-origin.so
/usr/libexec/bcftools/prune.so
/usr/libexec/bcftools/remove-overlaps.so
/usr/libexec/bcftools/scatter.so
/usr/libexec/bcftools/setGT.so
/usr/libexec/bcftools/smpl-stats.so
/usr/libexec/bcftools/split.so
/usr/libexec/bcftools/split-vep.so
/usr/libexec/bcftools/tag2tag.so
/usr/libexec/bcftools/trio-dnm2.so
/usr/libexec/bcftools/trio-stats.so
/usr/libexec/bcftools/trio-switch-rate.so
/usr/libexec/bcftools/variant-distance.so
/usr/libexec/bcftools/variantkey-hex.so
/usr/libexec/bcftools/vcf2table.so
/usr/libexec/bcftools/vrfs.so
/usr/share/doc/bcftools
/usr/share/doc/bcftools/AUTHORS
/usr/share/doc/bcftools/NEWS
/usr/share/licenses/bcftools
/usr/share/licenses/bcftools/LICENSE
/usr/share/man/man1/bcftools.1.gz

Field source: Fedora 44 Everything aarch64 revision 44-everything-aarch64:ad124f8125666e9059d7a8180427bdaea80f6286f71140457e5c7edd95883eee

Usar este paquete

OpenFactory puede arrancar este sistema operativo en una máquina virtual del navegador, o iniciar una construcción que incluye el nombre nativo del paquete de este registro.

Probar Fedora 44 en el navegador Construir una imagen que incluye bcftools

Versiones, suites y repositorios

Cada fila es metadato del índice de paquetes para una versión, arquitectura, suite y repositorio. Nombres, URL y tamaños vienen de la fuente; un enlace es un punto de descarga que puede cambiar, no una redistribución de OpenFactory.

Version	Release	Architecture	Repository	Package size	Installed size	Publisher repository artifact
1.23.1-1.fc44	44 / everything	aarch64	Fedora 44 · Everything · aarch64	983 KiB	4.4 MiB	Packages/b/bcftools-1.23.1-1.fc44.aarch64.rpm
1.23.1-1.fc44	44 / everything	x86_64	Fedora 44 · Everything · x86_64	1.0 MiB	3.1 MiB	Packages/b/bcftools-1.23.1-1.fc44.x86_64.rpm

Field source: Fedora 44 Everything aarch64 revision 44-everything-aarch64:ad124f8125666e9059d7a8180427bdaea80f6286f71140457e5c7edd95883eee

Sumas de comprobación y fechas de observación

For an APT source, signature verification authenticates the repository metadata chain and the Packages index containing this source-reported artifact digest. It does not certify package safety.

1.23.1-1.fc44 / aarch64Observed Sep 1, 2026 to Sep 1, 2026

Verification status: Metadata observed; artifact bytes were not independently fetched or hashed by this catalog import. The digest below is source-reported.

Source-reported sha256: 0a0615c93fb7be674281f4ba49d2d8107e148a3e1a4956604f965e4bb33e2061

After downloading that exact artifact, compare its bytes with the source-reported expected digest:

printf '%s  %s\n' '0a0615c93fb7be674281f4ba49d2d8107e148a3e1a4956604f965e4bb33e2061' 'bcftools-1.23.1-1.fc44.aarch64.rpm' | sha256sum --check --strict -

A match establishes equality with the repository metadata value. It does not establish safety or catalog-side artifact retrieval.

Field source: Fedora 44 Everything aarch64 revision 44-everything-aarch64:ad124f8125666e9059d7a8180427bdaea80f6286f71140457e5c7edd95883eee

1.23.1-1.fc44 / x86_64Observed Sep 1, 2026 to Sep 1, 2026

Verification status: Metadata observed; artifact bytes were not independently fetched or hashed by this catalog import. The digest below is source-reported.

Source-reported sha256: 2287704ade664fa17acdd7a762cf5b663ed4025d5cd2d6eb06f5e6b9382daa72

After downloading that exact artifact, compare its bytes with the source-reported expected digest:

printf '%s  %s\n' '2287704ade664fa17acdd7a762cf5b663ed4025d5cd2d6eb06f5e6b9382daa72' 'bcftools-1.23.1-1.fc44.x86_64.rpm' | sha256sum --check --strict -

A match establishes equality with the repository metadata value. It does not establish safety or catalog-side artifact retrieval.

Field source: Fedora 44 Everything x86_64 revision 44-everything-x86_64:da3845427d188097f6fd71b417a039bdfb8efefc4f38ca44b5cbb94f95a18991

Completitud del registro

The completeness score measures metadata coverage, not software quality, security, compatibility, or suitability.

Summary and description: 25/25
Artifact path and source digest: 25/25
Dependency metadata: 15/15
Package-file index: 15/15
Homepage: 5/5
License text: 5/5
Source package or maintainer: 10/10

Recorded total: 100/100

Field source: Fedora 44 Everything aarch64 revision 44-everything-aarch64:ad124f8125666e9059d7a8180427bdaea80f6286f71140457e5c7edd95883eee, Fedora 44 Everything x86_64 revision 44-everything-x86_64:da3845427d188097f6fd71b417a039bdfb8efefc4f38ca44b5cbb94f95a18991. The cross-OS mapping is catalog-derived from the source-reported homepage; it does not establish authorship or publisher identity

Fuentes y procedencia

Field-source links above resolve here. Each source entry names the metadata publisher, trust tier, exact snapshot revision, signature result, and observation time; catalog-derived mappings are labeled separately.

Fedora 44 Everything aarch64Sep 1, 2026
Authoritative source; repository metadata signature verified, revision 44-everything-aarch64:ad124f8125666e9059d7a8180427bdaea80f6286f71140457e5c7edd95883eee
Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.
Repository-signature verification record
Signed object
https://mirrors.fedoraproject.org/metalink?repo=fedora-44&arch=aarch64
Signed-object SHA-256
236514c32119ab3c85b81fbb9e5e9d92b07aeba0d19d64c9b4fc9117a1863769
Signer fingerprint
Not recorded
Keyring revision
RPM-GPG-KEY-fedora-44-primary
SHA-256 93642aec521a1e5e96dd715f7ae0ec0850ebc9de09a94ce03cae5263f26cc18a
Tool and policy
1
openfactory-software-catalog-signature-v1
Verification time
Sep 1, 2026
Signed Release → package-index hash linkage
Path: Not recorded
Expected SHA-256: Not recorded
Observed SHA-256: Not recorded
Result: match verified
Fedora 44 Everything x86_64Sep 1, 2026
Authoritative source; repository metadata signature verified, revision 44-everything-x86_64:da3845427d188097f6fd71b417a039bdfb8efefc4f38ca44b5cbb94f95a18991
Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.
Repository-signature verification record
Signed object
https://mirrors.fedoraproject.org/metalink?repo=fedora-44&arch=x86_64
Signed-object SHA-256
1300b99ac5d04b5561ad901320c8bd59ed1553f4971c3ce2ca48c40242c66676
Signer fingerprint
Not recorded
Keyring revision
RPM-GPG-KEY-fedora-44-primary
SHA-256 93642aec521a1e5e96dd715f7ae0ec0850ebc9de09a94ce03cae5263f26cc18a
Tool and policy
1
openfactory-software-catalog-signature-v1
Verification time
Sep 1, 2026
Signed Release → package-index hash linkage
Path: Not recorded
Expected SHA-256: Not recorded
Observed SHA-256: Not recorded
Result: match verified