Linux workstation

Fedora 44 native package

hmmer

Biosequence analysis using profile hidden Markov models

Packages / Fedora 44 / Unspecified / hmmer

[Source: hmmer]

Package: hmmer

[Project overview: hmmer]

External Resources:

Homepage: [hmmer.org]

Similar packages:

Biosequence analysis using profile hidden Markov models

HMMER is used for searching sequence databases for sequence homologs, and for making sequence alignments. It implements methods using probabilistic models called profile hidden Markov models (profile HMMs).

No published records match this suite and architecture filter.

Package file paths (81)

Paths come from the repository package-file index for the observed builds. They describe archive/package associations, not every file that will exist on a running system after maintainer scripts, alternatives, generated state, diversions, or installation choices.

  • /usr/bin/alimask
  • /usr/bin/hmmalign
  • /usr/bin/hmmbuild
  • /usr/bin/hmmconvert
  • /usr/bin/hmmemit
  • /usr/bin/hmmfetch
  • /usr/bin/hmmlogo
  • /usr/bin/hmmpgmd
  • /usr/bin/hmmpgmd_shard
  • /usr/bin/hmmpress
  • /usr/bin/hmmscan
  • /usr/bin/hmmsearch
  • /usr/bin/hmmsim
  • /usr/bin/hmmstat
  • /usr/bin/jackhmmer
  • /usr/bin/makehmmerdb
  • /usr/bin/nhmmer
  • /usr/bin/nhmmscan
  • /usr/bin/phmmer
  • /usr/lib/.build-id
  • /usr/lib/.build-id/06
  • /usr/lib/.build-id/06/bde54121d721581833da277ccf6ffdc386e30a
  • /usr/lib/.build-id/07
  • /usr/lib/.build-id/07/01c33db74bde2a539525fd4d205f14f6f03f90
  • /usr/lib/.build-id/21
  • /usr/lib/.build-id/21/7b32d1e51b3eb0ae33c8df698a5edfcf0e0f21
  • /usr/lib/.build-id/26
  • /usr/lib/.build-id/26/2e8dee84ef37bc11f4cb61374fb1dff0008ecd
  • /usr/lib/.build-id/43
  • /usr/lib/.build-id/43/ee522579317bdea44277335a5fb97a44e40d58
  • /usr/lib/.build-id/4e
  • /usr/lib/.build-id/4e/f30844e09c12c5da174141d4f3ae6321b23633
  • /usr/lib/.build-id/5b
  • /usr/lib/.build-id/5b/d128f3571e5591adddddf16e9d56730719b010
  • /usr/lib/.build-id/62
  • /usr/lib/.build-id/62/c50760bf6b2bc745a393c47482ee3cfc95c802
  • /usr/lib/.build-id/66
  • /usr/lib/.build-id/66/3796a24f71f845753b0f32b0abe4242c3e2c2b
  • /usr/lib/.build-id/6a
  • /usr/lib/.build-id/6a/16108f237ab9b42203a56d2fa889dcf23f6a12
  • /usr/lib/.build-id/75
  • /usr/lib/.build-id/75/cd6e1f40dddf09e1ccfca0b49199be3e1017f6
  • /usr/lib/.build-id/77
  • /usr/lib/.build-id/77/f2d3d87a4dfa1633325d6df0b2765e06787a56
  • /usr/lib/.build-id/86
  • /usr/lib/.build-id/86/b0b00d0bc29cb25af1cde4119ad519f73443d9
  • /usr/lib/.build-id/88
  • /usr/lib/.build-id/88/eaf157b10d586d7f6df9c10faa704bc19a0647
  • /usr/lib/.build-id/97
  • /usr/lib/.build-id/97/a2901069b16e054aff8d76abdca052276484b8
  • /usr/lib/.build-id/a1
  • /usr/lib/.build-id/a1/0a756eed583e3db0348e3af4540d0acfb8da9c
  • /usr/lib/.build-id/bd
  • /usr/lib/.build-id/bd/65c7cc392490c258294118254910cf2a02e708
  • /usr/lib/.build-id/ca
  • /usr/lib/.build-id/ca/77e3d2ec2423f5eed949b1ae17c138e27618f4
  • /usr/lib/.build-id/e6
  • /usr/lib/.build-id/e6/36dfe6fe1dff1df416b57ad2a613f6e880baf0
  • /usr/share/licenses/hmmer
  • /usr/share/licenses/hmmer/LICENSE
  • /usr/share/man/man1/alimask.1.gz
  • /usr/share/man/man1/hmmalign.1.gz
  • /usr/share/man/man1/hmmbuild.1.gz
  • /usr/share/man/man1/hmmc2.1.gz
  • /usr/share/man/man1/hmmconvert.1.gz
  • /usr/share/man/man1/hmmemit.1.gz
  • /usr/share/man/man1/hmmer.1.gz
  • /usr/share/man/man1/hmmfetch.1.gz
  • /usr/share/man/man1/hmmlogo.1.gz
  • /usr/share/man/man1/hmmpgmd.1.gz
  • /usr/share/man/man1/hmmpgmd_shard.1.gz
  • /usr/share/man/man1/hmmpress.1.gz
  • /usr/share/man/man1/hmmscan.1.gz
  • /usr/share/man/man1/hmmsearch.1.gz
  • /usr/share/man/man1/hmmsim.1.gz
  • /usr/share/man/man1/hmmstat.1.gz
  • /usr/share/man/man1/jackhmmer.1.gz
  • /usr/share/man/man1/makehmmerdb.1.gz
  • /usr/share/man/man1/nhmmer.1.gz
  • /usr/share/man/man1/nhmmscan.1.gz
  • /usr/share/man/man1/phmmer.1.gz

Use this package

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Try Fedora 44 in the browserBuild an image that includes hmmer

Versions, suites, and repositories

Each row is recorded package-index metadata for one version, architecture, suite, and repository. Names, URLs, and sizes are source-reported; a link is a potentially mutable retrieval location, not an OpenFactory redistribution claim or proof that OpenFactory retained the artifact bytes.

No published records match this suite and architecture filter.

Checksums and observation dates

For an APT source, signature verification authenticates the repository metadata chain and the Packages index containing this source-reported artifact digest. It does not certify package safety.

Catalog record completeness

The completeness score measures metadata coverage, not software quality, security, compatibility, or suitability.

Summary and description
25/25
Artifact path and source digest
25/25
Dependency metadata
15/15
Package-file index
15/15
Homepage
5/5
License text
5/5
Source package or maintainer
10/10

Recorded total: 100/100

Field source: Fedora 44 Everything x86_64 revision 44-everything-x86_64:da3845427d188097f6fd71b417a039bdfb8efefc4f38ca44b5cbb94f95a18991. The cross-OS mapping is catalog-derived from the source-reported homepage; it does not establish authorship or publisher identity

Sources and provenance

Field-source links above resolve here. Each source entry names the metadata publisher, trust tier, exact snapshot revision, signature result, and observation time; catalog-derived mappings are labeled separately.

  • Fedora 44 Everything x86_64Sep 1, 2026

    Authoritative source; repository metadata signature verified, revision 44-everything-x86_64:da3845427d188097f6fd71b417a039bdfb8efefc4f38ca44b5cbb94f95a18991

    Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.

    Repository-signature verification record
    Signed-object SHA-256
    1300b99ac5d04b5561ad901320c8bd59ed1553f4971c3ce2ca48c40242c66676
    Signer fingerprint
    Not recorded
    Keyring revision
    RPM-GPG-KEY-fedora-44-primary
    SHA-256 93642aec521a1e5e96dd715f7ae0ec0850ebc9de09a94ce03cae5263f26cc18a
    Tool and policy
    1
    openfactory-software-catalog-signature-v1
    Verification time
    Sep 1, 2026
    Signed Release → package-index hash linkage

    Path: Not recorded
    Expected SHA-256: Not recorded
    Observed SHA-256: Not recorded
    Result: match verified