Debian 13 (Trixie) native package

exonerate

generic tool for pairwise sequence comparison

Packages / Debian 13 (Trixie) / science / exonerate

[Source: exonerate]

Package: exonerate (2.4.0-5+b2)

Maintainers:

Debian Med Packaging Team

External Resources:

Homepage: [www.ebi.ac.uk]

generic tool for pairwise sequence comparison

Other Packages Related to exonerate:

dep: [libc6] (>= 2.34)
GNU C Library: Shared libraries
dep: [libglib2.0-0t64] (>= 2.76.0)
GLib library of C routines

sug: [wise]
comparison of biopolymers, like DNA and protein sequences

enh: [bioperl-run]
BioPerl wrappers: scripts

Download exonerate

Architecture	Package Size	Installed Size	Files
amd64	1.9 MiB	9.4 MiB	[list of files]
arm64	1.6 MiB	9.8 MiB	[list of files]

Шляхи файлів пакета (93)

Paths come from the repository package-file index for the observed builds. They describe archive/package associations, not every file that will exist on a running system after maintainer scripts, alternatives, generated state, diversions, or installation choices.

/usr/bin/esd2esi
/usr/bin/exonerate
/usr/bin/exonerate-server
/usr/bin/fasta2esd
/usr/bin/fastaannotatecdna
/usr/bin/fastachecksum
/usr/bin/fastaclean
/usr/bin/fastaclip
/usr/bin/fastacomposition
/usr/bin/fastadiff
/usr/bin/fastaexplode
/usr/bin/fastafetch
/usr/bin/fastahardmask
/usr/bin/fastaindex
/usr/bin/fastalength
/usr/bin/fastanrdb
/usr/bin/fastaoverlap
/usr/bin/fastareformat
/usr/bin/fastaremove
/usr/bin/fastarevcomp
/usr/bin/fastasoftmask
/usr/bin/fastasort
/usr/bin/fastasplit
/usr/bin/fastasubseq
/usr/bin/fastatranslate
/usr/bin/fastavalidcds
/usr/bin/ipcress
/usr/share/doc/exonerate/AUTHORS
/usr/share/doc/exonerate/changelog.Debian.amd64.gz
/usr/share/doc/exonerate/changelog.Debian.arm64.gz
/usr/share/doc/exonerate/changelog.Debian.gz
/usr/share/doc/exonerate/changelog.gz
/usr/share/doc/exonerate/ChangeLog.gz
/usr/share/doc/exonerate/copyright
/usr/share/doc/exonerate/examples/data/cdna/calm.human.dna.fasta
/usr/share/doc/exonerate/examples/data/cdna/htrt.human.dna.fasta
/usr/share/doc/exonerate/examples/data/cdna/p53.human.dna.fasta
/usr/share/doc/exonerate/examples/data/cdna/tube.drome.dna.fasta
/usr/share/doc/exonerate/examples/data/protein/calm.human.protein.fasta
/usr/share/doc/exonerate/examples/data/protein/htrt.human.protein.fasta
/usr/share/doc/exonerate/examples/data/protein/p53.human.protein.fasta
/usr/share/doc/exonerate/examples/data/protein/tube.drome.protein.fasta
/usr/share/doc/exonerate/examples/exonerate/exonerate.simple.test.sh
/usr/share/doc/exonerate/examples/ipcress/ipcress.simple.test.sh
/usr/share/doc/exonerate/examples/util/fastaclean.test.sh
/usr/share/doc/exonerate/examples/util/fastaclip.test.sh
/usr/share/doc/exonerate/examples/util/fastacomposition.test.sh
/usr/share/doc/exonerate/examples/util/fastadiff.test.sh
/usr/share/doc/exonerate/examples/util/fastaexpode.test.sh
/usr/share/doc/exonerate/examples/util/fastaindex.fastafetch.test.sh
/usr/share/doc/exonerate/examples/util/fastalength.test.sh
/usr/share/doc/exonerate/examples/util/fastanrdb.test.sh
/usr/share/doc/exonerate/examples/util/fastaoverlap.test.sh
/usr/share/doc/exonerate/examples/util/fastarefomat.test.sh
/usr/share/doc/exonerate/examples/util/fastaremove.test.sh
/usr/share/doc/exonerate/examples/util/fastarevcomp.test.sh
/usr/share/doc/exonerate/examples/util/fastasoftmask.fastahardmask.test.sh
/usr/share/doc/exonerate/examples/util/fastasort.test.sh
/usr/share/doc/exonerate/examples/util/fastasplit.test.sh
/usr/share/doc/exonerate/examples/util/fastasubseq.test.sh
/usr/share/doc/exonerate/examples/util/fastatranslate.test.sh
/usr/share/doc/exonerate/examples/util/fastavalidcds.test.sh
/usr/share/doc/exonerate/README.gz
/usr/share/doc/exonerate/TODO.gz
/usr/share/man/man1/esd2esi.1.gz
/usr/share/man/man1/exonerate.1.gz
/usr/share/man/man1/exonerate-client.1.gz
/usr/share/man/man1/exonerate-server.1.gz
/usr/share/man/man1/fasta2esd.1.gz
/usr/share/man/man1/fastaannotatecdna.1.gz
/usr/share/man/man1/fastachecksum.1.gz
/usr/share/man/man1/fastaclean.1.gz
/usr/share/man/man1/fastaclip.1.gz
/usr/share/man/man1/fastacomposition.1.gz
/usr/share/man/man1/fastadiff.1.gz
/usr/share/man/man1/fastaexplode.1.gz
/usr/share/man/man1/fastafetch.1.gz
/usr/share/man/man1/fastahardmask.1.gz
/usr/share/man/man1/fastaindex.1.gz
/usr/share/man/man1/fastalength.1.gz
/usr/share/man/man1/fastanrdb.1.gz
/usr/share/man/man1/fastaoverlap.1.gz
/usr/share/man/man1/fastareformat.1.gz
/usr/share/man/man1/fastaremove.1.gz
/usr/share/man/man1/fastarevcomp.1.gz
/usr/share/man/man1/fastasoftmask.1.gz
/usr/share/man/man1/fastasort.1.gz
/usr/share/man/man1/fastasplit.1.gz
/usr/share/man/man1/fastasubseq.1.gz
/usr/share/man/man1/fastatranslate.1.gz
/usr/share/man/man1/fastautils.1.gz
/usr/share/man/man1/fastavalidcds.1.gz
/usr/share/man/man1/ipcress.1.gz

Field source: Debian 13 (Trixie) main arm64 revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908

Використати цей пакет

OpenFactory може завантажити цю операційну систему у віртуальній машині браузера або почати збірку образу з рідною назвою пакета з цього запису.

Спробувати Debian 13 (Trixie) у браузері Зібрати образ, що містить exonerate

Версії, набори та репозиторії

Кожен рядок: метадані індексу пакетів для однієї версії, архітектури, набору й репозиторію. Назви, URL і розміри зі джерела; посилання є змінним місцем отримання, не перерозповсюдженням OpenFactory.

Version	Release	Architecture	Repository	Package size	Installed size	Publisher repository artifact
2.4.0-5+b2	trixie / main	arm64	Debian 13 · main · arm64	1.6 MiB	9.8 MiB	pool/main/e/exonerate/exonerate_2.4.0-5+b2_arm64.deb
2.4.0-5+b1	trixie / main	amd64	Debian 13 · main · amd64	1.9 MiB	9.4 MiB	pool/main/e/exonerate/exonerate_2.4.0-5+b1_amd64.deb

Field source: Debian 13 (Trixie) main arm64 revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908

Контрольні суми й дати спостереження

For an APT source, signature verification authenticates the repository metadata chain and the Packages index containing this source-reported artifact digest. It does not certify package safety.

2.4.0-5+b2 / arm64Observed Sep 1, 2026 to Sep 1, 2026

Verification status: Metadata observed; artifact bytes were not independently fetched or hashed by this catalog import. The digest below is source-reported.

Source-reported sha256: 9a4d8183b0b56a2d80d2577ac9ebbf23512ef35b75a4bfdfc5f2f410014688ec

After downloading that exact artifact, compare its bytes with the source-reported expected digest:

printf '%s  %s\n' '9a4d8183b0b56a2d80d2577ac9ebbf23512ef35b75a4bfdfc5f2f410014688ec' 'exonerate_2.4.0-5+b2_arm64.deb' | sha256sum --check --strict -

A match establishes equality with the repository metadata value. It does not establish safety or catalog-side artifact retrieval.

Field source: Debian 13 (Trixie) main arm64 revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908

2.4.0-5+b1 / amd64Observed Sep 1, 2026 to Sep 1, 2026

Verification status: Metadata observed; artifact bytes were not independently fetched or hashed by this catalog import. The digest below is source-reported.

Source-reported sha256: 9c2a9919561e3a996a43fc9f51bdf59460a785d3028af6d46e7d623ac6620ec8

After downloading that exact artifact, compare its bytes with the source-reported expected digest:

printf '%s  %s\n' '9c2a9919561e3a996a43fc9f51bdf59460a785d3028af6d46e7d623ac6620ec8' 'exonerate_2.4.0-5+b1_amd64.deb' | sha256sum --check --strict -

A match establishes equality with the repository metadata value. It does not establish safety or catalog-side artifact retrieval.

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3

Повнота запису каталогу

The completeness score measures metadata coverage, not software quality, security, compatibility, or suitability.

Summary and description: 25/25
Artifact path and source digest: 25/25
Dependency metadata: 15/15
Package-file index: 15/15
Homepage: 5/5
License text: 0/5
Source package or maintainer: 10/10

Recorded total: 95/100

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3, Debian 13 (Trixie) main arm64 revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908. The cross-OS mapping is catalog-derived from the source-reported homepage; it does not establish authorship or publisher identity

Джерела та походження

Field-source links above resolve here. Each source entry names the metadata publisher, trust tier, exact snapshot revision, signature result, and observation time; catalog-derived mappings are labeled separately.

Debian 13 (Trixie) main amd64Sep 1, 2026
Authoritative source; repository metadata signature verified, revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.
Repository-signature verification record
Signed object
https://deb.debian.org/debian/dists/trixie/InRelease
Signed-object SHA-256
98b25b5cd185c59d34aa6e4c3e9b5b8f01bbe9d104fe2dcfbcd30dc0a14a59ed
Signer fingerprint
4CB50190207B4758A3F73A796ED0E7B82643E131
Keyring revision
debian-archive-keyring.gpg
SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
Tool and policy
gpgv (GnuPG) 2.4.9
openfactory-software-catalog-signature-v1
Verification time
Sep 1, 2026
Signed Release → package-index hash linkage
Path: main/binary-amd64/Packages.xz
Expected SHA-256: 3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
Observed SHA-256: 3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
Result: match verified
Debian 13 (Trixie) main arm64Sep 1, 2026
Authoritative source; repository metadata signature verified, revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908
Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.
Repository-signature verification record
Signed object
https://deb.debian.org/debian/dists/trixie/InRelease
Signed-object SHA-256
98b25b5cd185c59d34aa6e4c3e9b5b8f01bbe9d104fe2dcfbcd30dc0a14a59ed
Signer fingerprint
4CB50190207B4758A3F73A796ED0E7B82643E131
Keyring revision
debian-archive-keyring.gpg
SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
Tool and policy
gpgv (GnuPG) 2.4.9
openfactory-software-catalog-signature-v1
Verification time
Sep 1, 2026
Signed Release → package-index hash linkage
Path: main/binary-arm64/Packages.xz
Expected SHA-256: 753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908
Observed SHA-256: 753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908
Result: match verified