Debian 13 (Trixie) native package

hmmer2

profile hidden Markov models for protein sequence analysis

Packages / Debian 13 (Trixie) / science / hmmer2

[Source: hmmer2]

Package: hmmer2 (2.3.2+dfsg-12+b2)

Maintainers:

Debian Med Packaging Team

External Resources:

Homepage: [hmmer.janelia.org]

Similar packages:

[hmmer2-doc]
profile hidden Markov models for protein sequence analysis (docs)
[libhmmer2-dev]
profile hidden Markov models for protein sequence analysis (devel)

profile hidden Markov models for protein sequence analysis

Other Packages Related to hmmer2:

dep: [libc6] (>= 2.34)
GNU C Library: Shared libraries
dep: [libsquid1t64] (>= 1.9g+cvs20050121)
biosquid dynamic library for biological sequence analysis

rec: [biosquid]
utilities for biological sequence analysis

sug: [hmmer2-doc] (>= 2.3.2+dfsg-12)
profile hidden Markov models for protein sequence analysis (docs)

Download hmmer2

Architecture	Package Size	Installed Size	Files
amd64	306 KiB	2.1 MiB	[list of files]
arm64	282 KiB	2.3 MiB	[list of files]

Шляхи файлів пакета (74)

Paths come from the repository package-file index for the observed builds. They describe archive/package associations, not every file that will exist on a running system after maintainer scripts, alternatives, generated state, diversions, or installation choices.

/usr/bin/hmm2align
/usr/bin/hmm2build
/usr/bin/hmm2calibrate
/usr/bin/hmm2convert
/usr/bin/hmm2emit
/usr/bin/hmm2fetch
/usr/bin/hmm2index
/usr/bin/hmm2pfam
/usr/bin/hmm2search
/usr/lib/hmmer2/hmmindex
/usr/lib/hmmer2/hmmpfam
/usr/share/doc/hmmer2/00README
/usr/share/doc/hmmer2/changelog.Debian.amd64.gz
/usr/share/doc/hmmer2/changelog.Debian.arm64.gz
/usr/share/doc/hmmer2/changelog.Debian.gz
/usr/share/doc/hmmer2/changelog.gz
/usr/share/doc/hmmer2/copyright
/usr/share/doc/hmmer2/examples/alignalign_test.c
/usr/share/doc/hmmer2/examples/evd_test.c
/usr/share/doc/hmmer2/examples/exercises-pvm.sqc
/usr/share/doc/hmmer2/examples/exercises.sqc
/usr/share/doc/hmmer2/examples/exercises-threaded.sqc
/usr/share/doc/hmmer2/examples/fitting_test.c
/usr/share/doc/hmmer2/examples/fn3-bin
/usr/share/doc/hmmer2/examples/fn3-bin-swap
/usr/share/doc/hmmer2/examples/fn3.hmm
/usr/share/doc/hmmer2/examples/fn3.seed
/usr/share/doc/hmmer2/examples/Makefile
/usr/share/doc/hmmer2/examples/Makefile.in
/usr/share/doc/hmmer2/examples/masks_test.c
/usr/share/doc/hmmer2/examples/Optiontests.fa
/usr/share/doc/hmmer2/examples/Optiontests.nfa
/usr/share/doc/hmmer2/examples/Optiontests.nslx
/usr/share/doc/hmmer2/examples/Optiontests.pam
/usr/share/doc/hmmer2/examples/Optiontests.pri
/usr/share/doc/hmmer2/examples/Optiontests.slx
/usr/share/doc/hmmer2/examples/Optiontests.sto
/usr/share/doc/hmmer2/examples/parsingviterbi_test.c
/usr/share/doc/hmmer2/examples/README
/usr/share/doc/hmmer2/examples/sqc
/usr/share/doc/hmmer2/examples/test1-conversion.pl
/usr/share/doc/hmmer2/examples/titin.fa
/usr/share/doc/hmmer2/examples/tophits_test.c
/usr/share/doc/hmmer2/examples/trace_test.c
/usr/share/doc/hmmer2/examples/trace_test.hmm
/usr/share/doc/hmmer2/examples/trace_test.seq
/usr/share/doc/hmmer2/examples/trace_test.slx
/usr/share/doc/hmmer2/examples/tutorial/amino.null
/usr/share/doc/hmmer2/examples/tutorial/amino.pri
/usr/share/doc/hmmer2/examples/tutorial/Artemia.fa
/usr/share/doc/hmmer2/examples/tutorial/fn3.sto
/usr/share/doc/hmmer2/examples/tutorial/globins50.msf
/usr/share/doc/hmmer2/examples/tutorial/globins630.fa
/usr/share/doc/hmmer2/examples/tutorial/nucleic.null
/usr/share/doc/hmmer2/examples/tutorial/nucleic.pri
/usr/share/doc/hmmer2/examples/tutorial/pkinase.sto
/usr/share/doc/hmmer2/examples/tutorial/rrm.hmm
/usr/share/doc/hmmer2/examples/tutorial/rrm.sto
/usr/share/doc/hmmer2/examples/viterbi_exercise.c
/usr/share/doc/hmmer2/examples/weeviterbi_test.c
/usr/share/doc/hmmer2/examples/weeviterbi_test.hmm
/usr/share/doc/hmmer2/examples/weeviterbi_test.seq
/usr/share/doc/hmmer2/NOTES.gz
/usr/share/doc/hmmer2/README.Debian
/usr/share/man/man1/hmm2align.1.gz
/usr/share/man/man1/hmm2build.1.gz
/usr/share/man/man1/hmm2calibrate.1.gz
/usr/share/man/man1/hmm2convert.1.gz
/usr/share/man/man1/hmm2emit.1.gz
/usr/share/man/man1/hmm2fetch.1.gz
/usr/share/man/man1/hmm2index.1.gz
/usr/share/man/man1/hmm2pfam.1.gz
/usr/share/man/man1/hmm2search.1.gz
/usr/share/man/man1/hmmer2.1.gz

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3

Використати цей пакет

OpenFactory може завантажити цю операційну систему у віртуальній машині браузера або почати збірку образу з рідною назвою пакета з цього запису.

Спробувати Debian 13 (Trixie) у браузері Зібрати образ, що містить hmmer2

Версії, набори та репозиторії

Кожен рядок: метадані індексу пакетів для однієї версії, архітектури, набору й репозиторію. Назви, URL і розміри зі джерела; посилання є змінним місцем отримання, не перерозповсюдженням OpenFactory.

Version	Release	Architecture	Repository	Package size	Installed size	Publisher repository artifact
2.3.2+dfsg-12+b2	trixie / main	amd64	Debian 13 · main · amd64	306 KiB	2.1 MiB	pool/main/h/hmmer2/hmmer2_2.3.2+dfsg-12+b2_amd64.deb
2.3.2+dfsg-12+b2	trixie / main	arm64	Debian 13 · main · arm64	282 KiB	2.3 MiB	pool/main/h/hmmer2/hmmer2_2.3.2+dfsg-12+b2_arm64.deb

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3

Контрольні суми й дати спостереження

For an APT source, signature verification authenticates the repository metadata chain and the Packages index containing this source-reported artifact digest. It does not certify package safety.

2.3.2+dfsg-12+b2 / amd64Observed Sep 1, 2026 to Sep 1, 2026

Verification status: Metadata observed; artifact bytes were not independently fetched or hashed by this catalog import. The digest below is source-reported.

Source-reported sha256: a2e7f9a6bca560219964437d25917fd908d13ca475785019b2aad86ffbae73ab

After downloading that exact artifact, compare its bytes with the source-reported expected digest:

printf '%s  %s\n' 'a2e7f9a6bca560219964437d25917fd908d13ca475785019b2aad86ffbae73ab' 'hmmer2_2.3.2+dfsg-12+b2_amd64.deb' | sha256sum --check --strict -

A match establishes equality with the repository metadata value. It does not establish safety or catalog-side artifact retrieval.

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3

2.3.2+dfsg-12+b2 / arm64Observed Sep 1, 2026 to Sep 1, 2026

Verification status: Metadata observed; artifact bytes were not independently fetched or hashed by this catalog import. The digest below is source-reported.

Source-reported sha256: 12351e49955ed85645b4e00d7806647aae4ab98f925b7ccae1445f72b6aa24f9

After downloading that exact artifact, compare its bytes with the source-reported expected digest:

printf '%s  %s\n' '12351e49955ed85645b4e00d7806647aae4ab98f925b7ccae1445f72b6aa24f9' 'hmmer2_2.3.2+dfsg-12+b2_arm64.deb' | sha256sum --check --strict -

A match establishes equality with the repository metadata value. It does not establish safety or catalog-side artifact retrieval.

Field source: Debian 13 (Trixie) main arm64 revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908

Повнота запису каталогу

The completeness score measures metadata coverage, not software quality, security, compatibility, or suitability.

Summary and description: 25/25
Artifact path and source digest: 25/25
Dependency metadata: 15/15
Package-file index: 15/15
Homepage: 5/5
License text: 0/5
Source package or maintainer: 10/10

Recorded total: 95/100

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3, Debian 13 (Trixie) main arm64 revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908. The cross-OS mapping is catalog-derived from the source-reported homepage; it does not establish authorship or publisher identity

Джерела та походження

Field-source links above resolve here. Each source entry names the metadata publisher, trust tier, exact snapshot revision, signature result, and observation time; catalog-derived mappings are labeled separately.

Debian 13 (Trixie) main amd64Sep 1, 2026
Authoritative source; repository metadata signature verified, revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.
Repository-signature verification record
Signed object
https://deb.debian.org/debian/dists/trixie/InRelease
Signed-object SHA-256
98b25b5cd185c59d34aa6e4c3e9b5b8f01bbe9d104fe2dcfbcd30dc0a14a59ed
Signer fingerprint
4CB50190207B4758A3F73A796ED0E7B82643E131
Keyring revision
debian-archive-keyring.gpg
SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
Tool and policy
gpgv (GnuPG) 2.4.9
openfactory-software-catalog-signature-v1
Verification time
Sep 1, 2026
Signed Release → package-index hash linkage
Path: main/binary-amd64/Packages.xz
Expected SHA-256: 3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
Observed SHA-256: 3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
Result: match verified
Debian 13 (Trixie) main arm64Sep 1, 2026
Authoritative source; repository metadata signature verified, revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908
Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.
Repository-signature verification record
Signed object
https://deb.debian.org/debian/dists/trixie/InRelease
Signed-object SHA-256
98b25b5cd185c59d34aa6e4c3e9b5b8f01bbe9d104fe2dcfbcd30dc0a14a59ed
Signer fingerprint
4CB50190207B4758A3F73A796ED0E7B82643E131
Keyring revision
debian-archive-keyring.gpg
SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
Tool and policy
gpgv (GnuPG) 2.4.9
openfactory-software-catalog-signature-v1
Verification time
Sep 1, 2026
Signed Release → package-index hash linkage
Path: main/binary-arm64/Packages.xz
Expected SHA-256: 753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908
Observed SHA-256: 753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908
Result: match verified