Linux workstation

Debian 13 (Trixie) native package

igor

infers V(D)J recombination processes from sequencing data

Packages / Debian 13 (Trixie) / science / igor

[Source: igor]

Package: igor (1.4.0+dfsg-5+b1)

Maintainers:

Debian Med Packaging Team

External Resources:

Homepage: [github.com]

infers V(D)J recombination processes from sequencing data

Other Packages Related to igor:

  • dep: [libblas3]

    Basic Linear Algebra Reference implementations, shared library

  • dep: libblas.so.3

    Package not available

  • dep: [libc6] (>= 2.38)

    GNU C Library: Shared libraries

  • dep: [libgcc-s1] (>= 3.0)

    GCC support library

  • dep: [libgomp1] (>= 6)

    GCC OpenMP (GOMP) support library

  • dep: [libgsl28] (>= 2.8+dfsg)

    GNU Scientific Library (GSL) -- library package

  • dep: [libjemalloc2] (>= 5.0.0)

    general-purpose scalable concurrent malloc(3) implementation

  • dep: [libstdc++6] (>= 14)

    GNU Standard C++ Library v3

Download igor

ArchitecturePackage SizeInstalled SizeFiles
amd64581 KiB2.7 MiB[list of files]
arm64528 KiB2.6 MiB[list of files]

Шляхи файлів пакета (79)

Paths come from the repository package-file index for the observed builds. They describe archive/package associations, not every file that will exist on a running system after maintainer scripts, alternatives, generated state, diversions, or installation choices.

  • /usr/bin/igor
  • /usr/bin/igor-compute_pgen
  • /usr/share/doc/igor/changelog.Debian.amd64.gz
  • /usr/share/doc/igor/changelog.Debian.arm64.gz
  • /usr/share/doc/igor/changelog.Debian.gz
  • /usr/share/doc/igor/changelog.gz
  • /usr/share/doc/igor/copyright
  • /usr/share/doc/igor/examples/genomicDs.fasta
  • /usr/share/doc/igor/examples/genomicJs_all_curated.fasta
  • /usr/share/doc/igor/examples/genomicVs_with_primers.fasta
  • /usr/share/doc/igor/examples/murugan_naive1_noncoding_demo_seqs.txt
  • /usr/share/igor/demo/genomicDs.fasta
  • /usr/share/igor/demo/genomicJs_all_curated.fasta
  • /usr/share/igor/demo/genomicVs_with_primers.fasta
  • /usr/share/igor/demo/murugan_naive1_noncoding_demo_seqs.txt
  • /usr/share/igor/models/heavy_pen_substitution_matrix.csv
  • /usr/share/igor/models/human/bcr_heavy/model.info
  • /usr/share/igor/models/human/bcr_heavy/models/model_marginals.txt
  • /usr/share/igor/models/human/bcr_heavy/models/model_parms.txt
  • /usr/share/igor/models/human/bcr_heavy/ref_genome/genomicDs.fasta
  • /usr/share/igor/models/human/bcr_heavy/ref_genome/genomicJs.fasta
  • /usr/share/igor/models/human/bcr_heavy/ref_genome/genomicVs.fasta
  • /usr/share/igor/models/human/bcr_heavy/ref_genome/J_gene_CDR3_anchors.csv
  • /usr/share/igor/models/human/bcr_heavy/ref_genome/V_gene_CDR3_anchors.csv
  • /usr/share/igor/models/human/bcr_heavy/supplementary_models/ind_3mer_D_hyperm_parms.txt
  • /usr/share/igor/models/human/bcr_heavy/supplementary_models/ind_3mer_J_hyperm_parms.txt
  • /usr/share/igor/models/human/bcr_heavy/supplementary_models/ind_3mer_V_hyperm_parms.txt
  • /usr/share/igor/models/human/bcr_heavy/supplementary_models/ind_5mer_D_hyperm_parms.txt
  • /usr/share/igor/models/human/bcr_heavy/supplementary_models/ind_5mer_J_hyperm_parms.txt
  • /usr/share/igor/models/human/bcr_heavy/supplementary_models/ind_5mer_V_hyperm_parms.txt
  • /usr/share/igor/models/human/bcr_heavy/supplementary_models/ind_7mer_D_hyperm_parms.txt
  • /usr/share/igor/models/human/bcr_heavy/supplementary_models/ind_7mer_J_hyperm_parms.txt
  • /usr/share/igor/models/human/bcr_heavy/supplementary_models/ind_7mer_V_hyperm_parms.txt
  • /usr/share/igor/models/human/bcr_heavy/supplementary_models/ind_9mer_D_hyperm_parms.txt
  • /usr/share/igor/models/human/bcr_heavy/supplementary_models/ind_9mer_J_hyperm_parms.txt
  • /usr/share/igor/models/human/bcr_heavy/supplementary_models/ind_9mer_V_hyperm_parms.txt
  • /usr/share/igor/models/human/bcr_heavy/supplementary_models/models.info
  • /usr/share/igor/models/human/IGK/models/model_marginals.txt
  • /usr/share/igor/models/human/IGK/models/model_parms.txt
  • /usr/share/igor/models/human/IGK/ref_genome/genomicJs.fasta
  • /usr/share/igor/models/human/IGK/ref_genome/genomicVs.fasta
  • /usr/share/igor/models/human/IGK/ref_genome/J_gene_CDR3_anchors.csv
  • /usr/share/igor/models/human/IGK/ref_genome/V_gene_CDR3_anchors.csv
  • /usr/share/igor/models/human/IGL/models/model_marginals.txt
  • /usr/share/igor/models/human/IGL/models/model_parms.txt
  • /usr/share/igor/models/human/IGL/ref_genome/genomicJs.fasta
  • /usr/share/igor/models/human/IGL/ref_genome/genomicVs.fasta
  • /usr/share/igor/models/human/IGL/ref_genome/J_gene_CDR3_anchors.csv
  • /usr/share/igor/models/human/IGL/ref_genome/V_gene_CDR3_anchors.csv
  • /usr/share/igor/models/human/tcr_alpha/model.info
  • /usr/share/igor/models/human/tcr_alpha/models/model_marginals.txt
  • /usr/share/igor/models/human/tcr_alpha/models/model_parms.txt
  • /usr/share/igor/models/human/tcr_alpha/ref_genome/genomicJs.fasta
  • /usr/share/igor/models/human/tcr_alpha/ref_genome/genomicVs.fasta
  • /usr/share/igor/models/human/tcr_alpha/ref_genome/J_gene_CDR3_anchors.csv
  • /usr/share/igor/models/human/tcr_alpha/ref_genome/V_gene_CDR3_anchors.csv
  • /usr/share/igor/models/human/tcr_beta/model.info
  • /usr/share/igor/models/human/tcr_beta/models/model_marginals.txt
  • /usr/share/igor/models/human/tcr_beta/models/model_parms.txt
  • /usr/share/igor/models/human/tcr_beta/ref_genome/genomicDs.fasta
  • /usr/share/igor/models/human/tcr_beta/ref_genome/genomicJs.fasta
  • /usr/share/igor/models/human/tcr_beta/ref_genome/genomicVs.fasta
  • /usr/share/igor/models/human/tcr_beta/ref_genome/J_gene_CDR3_anchors.csv
  • /usr/share/igor/models/human/tcr_beta/ref_genome/V_gene_CDR3_anchors.csv
  • /usr/share/igor/models/human/tcr_beta/supplementary_models/naive_1/final_marginals.txt
  • /usr/share/igor/models/human/tcr_beta/supplementary_models/naive_1/final_parms.txt
  • /usr/share/igor/models/human/tcr_beta/supplementary_models/naive_1/model.info
  • /usr/share/igor/models/human/tcr_beta/supplementary_models/naive_4/final_marginals.txt
  • /usr/share/igor/models/human/tcr_beta/supplementary_models/naive_4/final_parms.txt
  • /usr/share/igor/models/human/tcr_beta/supplementary_models/naive_4/model.info
  • /usr/share/igor/models/mouse/tcr_beta/model.info
  • /usr/share/igor/models/mouse/tcr_beta/models/model_marginals.txt
  • /usr/share/igor/models/mouse/tcr_beta/models/model_parms.txt
  • /usr/share/igor/models/mouse/tcr_beta/ref_genome/genomicDs.fasta
  • /usr/share/igor/models/mouse/tcr_beta/ref_genome/genomicJs.fasta
  • /usr/share/igor/models/mouse/tcr_beta/ref_genome/genomicVs.fasta
  • /usr/share/igor/models/mouse/tcr_beta/ref_genome/J_gene_CDR3_anchors.csv
  • /usr/share/igor/models/mouse/tcr_beta/ref_genome/V_gene_CDR3_anchors.csv
  • /usr/share/man/man1/igor.1.gz

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3

Використати цей пакет

OpenFactory може завантажити цю операційну систему у віртуальній машині браузера або почати збірку образу з рідною назвою пакета з цього запису.

Спробувати Debian 13 (Trixie) у браузеріЗібрати образ, що містить igor

Версії, набори та репозиторії

Кожен рядок: метадані індексу пакетів для однієї версії, архітектури, набору й репозиторію. Назви, URL і розміри зі джерела; посилання є змінним місцем отримання, не перерозповсюдженням OpenFactory.

VersionReleaseArchitectureRepositoryPackage sizeInstalled sizePublisher repository artifact
1.4.0+dfsg-5+b1trixie / mainamd64Debian 13 · main · amd64581 KiB2.7 MiBpool/main/i/igor/igor_1.4.0+dfsg-5+b1_amd64.deb
1.4.0+dfsg-5+b1trixie / mainarm64Debian 13 · main · arm64528 KiB2.6 MiBpool/main/i/igor/igor_1.4.0+dfsg-5+b1_arm64.deb

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3

Контрольні суми й дати спостереження

For an APT source, signature verification authenticates the repository metadata chain and the Packages index containing this source-reported artifact digest. It does not certify package safety.

1.4.0+dfsg-5+b1 / amd64Observed Sep 1, 2026 to Sep 1, 2026

Verification status: Metadata observed; artifact bytes were not independently fetched or hashed by this catalog import. The digest below is source-reported.

Source-reported sha256: fa55a8eab6ec4ed2dae26a4a9baea1575bf370623863e007366df02d102f2f73

After downloading that exact artifact, compare its bytes with the source-reported expected digest:

printf '%s %s\n' 'fa55a8eab6ec4ed2dae26a4a9baea1575bf370623863e007366df02d102f2f73' 'igor_1.4.0+dfsg-5+b1_amd64.deb' | sha256sum --check --strict -

A match establishes equality with the repository metadata value. It does not establish safety or catalog-side artifact retrieval.

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3

1.4.0+dfsg-5+b1 / arm64Observed Sep 1, 2026 to Sep 1, 2026

Verification status: Metadata observed; artifact bytes were not independently fetched or hashed by this catalog import. The digest below is source-reported.

Source-reported sha256: a2cc3dddd7b0fa87c27606ce6d14d92df37692ad1e6cd5509baa1b0103da11d0

After downloading that exact artifact, compare its bytes with the source-reported expected digest:

printf '%s %s\n' 'a2cc3dddd7b0fa87c27606ce6d14d92df37692ad1e6cd5509baa1b0103da11d0' 'igor_1.4.0+dfsg-5+b1_arm64.deb' | sha256sum --check --strict -

A match establishes equality with the repository metadata value. It does not establish safety or catalog-side artifact retrieval.

Field source: Debian 13 (Trixie) main arm64 revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908

Повнота запису каталогу

The completeness score measures metadata coverage, not software quality, security, compatibility, or suitability.

Summary and description
25/25
Artifact path and source digest
25/25
Dependency metadata
15/15
Package-file index
15/15
Homepage
5/5
License text
0/5
Source package or maintainer
10/10

Recorded total: 95/100

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3, Debian 13 (Trixie) main arm64 revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908. The cross-OS mapping is catalog-derived from the source-reported homepage; it does not establish authorship or publisher identity

Джерела та походження

Field-source links above resolve here. Each source entry names the metadata publisher, trust tier, exact snapshot revision, signature result, and observation time; catalog-derived mappings are labeled separately.

  • Debian 13 (Trixie) main amd64Sep 1, 2026

    Authoritative source; repository metadata signature verified, revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3

    Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.

    Repository-signature verification record
    Signed-object SHA-256
    98b25b5cd185c59d34aa6e4c3e9b5b8f01bbe9d104fe2dcfbcd30dc0a14a59ed
    Signer fingerprint
    4CB50190207B4758A3F73A796ED0E7B82643E131
    Keyring revision
    debian-archive-keyring.gpg
    SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
    Tool and policy
    gpgv (GnuPG) 2.4.9
    openfactory-software-catalog-signature-v1
    Verification time
    Sep 1, 2026
    Signed Release → package-index hash linkage

    Path: main/binary-amd64/Packages.xz
    Expected SHA-256: 3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
    Observed SHA-256: 3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
    Result: match verified

  • Debian 13 (Trixie) main arm64Sep 1, 2026

    Authoritative source; repository metadata signature verified, revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908

    Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.

    Repository-signature verification record
    Signed-object SHA-256
    98b25b5cd185c59d34aa6e4c3e9b5b8f01bbe9d104fe2dcfbcd30dc0a14a59ed
    Signer fingerprint
    4CB50190207B4758A3F73A796ED0E7B82643E131
    Keyring revision
    debian-archive-keyring.gpg
    SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
    Tool and policy
    gpgv (GnuPG) 2.4.9
    openfactory-software-catalog-signature-v1
    Verification time
    Sep 1, 2026
    Signed Release → package-index hash linkage

    Path: main/binary-arm64/Packages.xz
    Expected SHA-256: 753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908
    Observed SHA-256: 753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908
    Result: match verified

igor Package for Debian 13 (Trixie) | OpenFactory