Debian 13 (Trixie) native package

macs

Model-based Analysis of ChIP-Seq on short reads sequencers

Packages / Debian 13 (Trixie) / science / macs

[Source: macs]

Package: macs (3.0.2-1+b3)

Maintainers:

Debian Med Packaging Team

External Resources:

Homepage: [github.com]

Model-based Analysis of ChIP-Seq on short reads sequencers

Other Packages Related to macs:

dep: python3-numpy2-abi0
Package not available
dep: python3-numpy-abi9
Package not available
dep: [python3] (<< 3.14)
interactive high-level object-oriented language (default python3 version)
dep: [python3] (>= 3.13~)
interactive high-level object-oriented language (default python3 version)
dep: [python3-cykhash]
cython wrapper for khash-sets/maps, efficient implementation of isin and unique
dep: [python3-hmmlearn]
unsupervised learning and inference of Hidden Markov Models
dep: [python3-numpy]
Python library for numerical computations (Python 3)
dep: [python3-scipy]
scientific tools for Python 3
dep: [python3-sklearn]
Python modules for machine learning and data mining - Python 3
dep: [python3] [any]
interactive high-level object-oriented language (default python3 version)
dep: [libc6] (>= 2.38)
GNU C Library: Shared libraries
dep: [zlib1g] (>= 1:1.1.4)
compression library - runtime

Download macs

Architecture	Package Size	Installed Size	Files
amd64	3.0 MiB	8.1 MiB	[list of files]
arm64	2.7 MiB	7.9 MiB	[list of files]

Шляхи файлів пакета (103)

Paths come from the repository package-file index for the observed builds. They describe archive/package associations, not every file that will exist on a running system after maintainer scripts, alternatives, generated state, diversions, or installation choices.

/usr/bin/macs3
/usr/lib/python3/dist-packages/MACS3-3.0.2.dist-info/INSTALLER
/usr/lib/python3/dist-packages/MACS3-3.0.2.dist-info/METADATA
/usr/lib/python3/dist-packages/MACS3-3.0.2.dist-info/top_level.txt
/usr/lib/python3/dist-packages/MACS3-3.0.2.dist-info/WHEEL
/usr/lib/python3/dist-packages/MACS3/Commands/bdgbroadcall_cmd.py
/usr/lib/python3/dist-packages/MACS3/Commands/bdgcmp_cmd.py
/usr/lib/python3/dist-packages/MACS3/Commands/bdgdiff_cmd.py
/usr/lib/python3/dist-packages/MACS3/Commands/bdgopt_cmd.py
/usr/lib/python3/dist-packages/MACS3/Commands/bdgpeakcall_cmd.py
/usr/lib/python3/dist-packages/MACS3/Commands/callpeak_cmd.py
/usr/lib/python3/dist-packages/MACS3/Commands/callvar_cmd.py
/usr/lib/python3/dist-packages/MACS3/Commands/cmbreps_cmd.py
/usr/lib/python3/dist-packages/MACS3/Commands/diffpeak_cmd.py
/usr/lib/python3/dist-packages/MACS3/Commands/filterdup_cmd.py
/usr/lib/python3/dist-packages/MACS3/Commands/hmmratac_cmd.py
/usr/lib/python3/dist-packages/MACS3/Commands/__init__.py
/usr/lib/python3/dist-packages/MACS3/Commands/pileup_cmd.py
/usr/lib/python3/dist-packages/MACS3/Commands/predictd_cmd.py
/usr/lib/python3/dist-packages/MACS3/Commands/randsample_cmd.py
/usr/lib/python3/dist-packages/MACS3/Commands/refinepeak_cmd.py
/usr/lib/python3/dist-packages/MACS3/__init__.py
/usr/lib/python3/dist-packages/MACS3/IO/BAM.cpython-313-aarch64-linux-gnu.so
/usr/lib/python3/dist-packages/MACS3/IO/BAM.cpython-313-x86_64-linux-gnu.so
/usr/lib/python3/dist-packages/MACS3/IO/BedGraphIO.cpython-313-aarch64-linux-gnu.so
/usr/lib/python3/dist-packages/MACS3/IO/BedGraphIO.cpython-313-x86_64-linux-gnu.so
/usr/lib/python3/dist-packages/MACS3/IO/__init__.py
/usr/lib/python3/dist-packages/MACS3/IO/OutputWriter.py
/usr/lib/python3/dist-packages/MACS3/IO/Parser.cpython-313-aarch64-linux-gnu.so
/usr/lib/python3/dist-packages/MACS3/IO/Parser.cpython-313-x86_64-linux-gnu.so
/usr/lib/python3/dist-packages/MACS3/IO/PeakIO.cpython-313-aarch64-linux-gnu.so
/usr/lib/python3/dist-packages/MACS3/IO/PeakIO.cpython-313-x86_64-linux-gnu.so
/usr/lib/python3/dist-packages/MACS3/Signal/BedGraph.cpython-313-aarch64-linux-gnu.so
/usr/lib/python3/dist-packages/MACS3/Signal/BedGraph.cpython-313-x86_64-linux-gnu.so
/usr/lib/python3/dist-packages/MACS3/Signal/CallPeakUnit.cpython-313-aarch64-linux-gnu.so
/usr/lib/python3/dist-packages/MACS3/Signal/CallPeakUnit.cpython-313-x86_64-linux-gnu.so
/usr/lib/python3/dist-packages/MACS3/Signal/FixWidthTrack.cpython-313-aarch64-linux-gnu.so
/usr/lib/python3/dist-packages/MACS3/Signal/FixWidthTrack.cpython-313-x86_64-linux-gnu.so
/usr/lib/python3/dist-packages/MACS3/Signal/HMMR_EM.cpython-313-aarch64-linux-gnu.so
/usr/lib/python3/dist-packages/MACS3/Signal/HMMR_EM.cpython-313-x86_64-linux-gnu.so
/usr/lib/python3/dist-packages/MACS3/Signal/HMMR_HMM.cpython-313-aarch64-linux-gnu.so
/usr/lib/python3/dist-packages/MACS3/Signal/HMMR_HMM.cpython-313-x86_64-linux-gnu.so
/usr/lib/python3/dist-packages/MACS3/Signal/HMMR_Signal_Processing.cpython-313-aarch64-linux-gnu.so
/usr/lib/python3/dist-packages/MACS3/Signal/HMMR_Signal_Processing.cpython-313-x86_64-linux-gnu.so
/usr/lib/python3/dist-packages/MACS3/Signal/__init__.py
/usr/lib/python3/dist-packages/MACS3/Signal/PairedEndTrack.cpython-313-aarch64-linux-gnu.so
/usr/lib/python3/dist-packages/MACS3/Signal/PairedEndTrack.cpython-313-x86_64-linux-gnu.so
/usr/lib/python3/dist-packages/MACS3/Signal/PeakDetect.cpython-313-aarch64-linux-gnu.so
/usr/lib/python3/dist-packages/MACS3/Signal/PeakDetect.cpython-313-x86_64-linux-gnu.so
/usr/lib/python3/dist-packages/MACS3/Signal/PeakModel.cpython-313-aarch64-linux-gnu.so
/usr/lib/python3/dist-packages/MACS3/Signal/PeakModel.cpython-313-x86_64-linux-gnu.so
/usr/lib/python3/dist-packages/MACS3/Signal/PeakVariants.cpython-313-aarch64-linux-gnu.so
/usr/lib/python3/dist-packages/MACS3/Signal/PeakVariants.cpython-313-x86_64-linux-gnu.so
/usr/lib/python3/dist-packages/MACS3/Signal/Pileup.cpython-313-aarch64-linux-gnu.so
/usr/lib/python3/dist-packages/MACS3/Signal/Pileup.cpython-313-x86_64-linux-gnu.so
/usr/lib/python3/dist-packages/MACS3/Signal/PileupV2.cpython-313-aarch64-linux-gnu.so
/usr/lib/python3/dist-packages/MACS3/Signal/PileupV2.cpython-313-x86_64-linux-gnu.so
/usr/lib/python3/dist-packages/MACS3/Signal/PosReadsInfo.cpython-313-aarch64-linux-gnu.so
/usr/lib/python3/dist-packages/MACS3/Signal/PosReadsInfo.cpython-313-x86_64-linux-gnu.so
/usr/lib/python3/dist-packages/MACS3/Signal/Prob.cpython-313-aarch64-linux-gnu.so
/usr/lib/python3/dist-packages/MACS3/Signal/Prob.cpython-313-x86_64-linux-gnu.so
/usr/lib/python3/dist-packages/MACS3/Signal/RACollection.cpython-313-aarch64-linux-gnu.so
/usr/lib/python3/dist-packages/MACS3/Signal/RACollection.cpython-313-x86_64-linux-gnu.so
/usr/lib/python3/dist-packages/MACS3/Signal/ReadAlignment.cpython-313-aarch64-linux-gnu.so
/usr/lib/python3/dist-packages/MACS3/Signal/ReadAlignment.cpython-313-x86_64-linux-gnu.so
/usr/lib/python3/dist-packages/MACS3/Signal/Region.cpython-313-aarch64-linux-gnu.so
/usr/lib/python3/dist-packages/MACS3/Signal/Region.cpython-313-x86_64-linux-gnu.so
/usr/lib/python3/dist-packages/MACS3/Signal/ScoreTrack.cpython-313-aarch64-linux-gnu.so
/usr/lib/python3/dist-packages/MACS3/Signal/ScoreTrack.cpython-313-x86_64-linux-gnu.so
/usr/lib/python3/dist-packages/MACS3/Signal/SignalProcessing.cpython-313-aarch64-linux-gnu.so
/usr/lib/python3/dist-packages/MACS3/Signal/SignalProcessing.cpython-313-x86_64-linux-gnu.so
/usr/lib/python3/dist-packages/MACS3/Signal/UnitigRACollection.cpython-313-aarch64-linux-gnu.so
/usr/lib/python3/dist-packages/MACS3/Signal/UnitigRACollection.cpython-313-x86_64-linux-gnu.so
/usr/lib/python3/dist-packages/MACS3/Signal/VariantStat.cpython-313-aarch64-linux-gnu.so
/usr/lib/python3/dist-packages/MACS3/Signal/VariantStat.cpython-313-x86_64-linux-gnu.so
/usr/lib/python3/dist-packages/MACS3/Utilities/Constants.py
/usr/lib/python3/dist-packages/MACS3/Utilities/__init__.py
/usr/lib/python3/dist-packages/MACS3/Utilities/Logger.py
/usr/lib/python3/dist-packages/MACS3/Utilities/OptValidator.py
/usr/share/doc/macs/changelog.Debian.amd64.gz
/usr/share/doc/macs/changelog.Debian.arm64.gz
/usr/share/doc/macs/changelog.Debian.gz
/usr/share/doc/macs/changelog.gz
/usr/share/doc/macs/copyright
/usr/share/doc/macs/examples/aluY.chr1.bed.gz
/usr/share/doc/macs/examples/gerp.chr1.bed.gz
/usr/share/doc/macs/README.md
/usr/share/doc/macs/README.test
/usr/share/doc/macs/run-unit-test
/usr/share/lintian/overrides/macs
/usr/share/man/man1/macs3.1.gz
/usr/share/man/man1/macs3_bdgbroadcall.1.gz
/usr/share/man/man1/macs3_bdgcmp.1.gz
/usr/share/man/man1/macs3_bdgdiff.1.gz
/usr/share/man/man1/macs3_bdgopt.1.gz
/usr/share/man/man1/macs3_bdgpeakcall.1.gz
/usr/share/man/man1/macs3_callpeak.1.gz
/usr/share/man/man1/macs3_cmbreps.1.gz
/usr/share/man/man1/macs3_filterdup.1.gz
/usr/share/man/man1/macs3_pileup.1.gz
/usr/share/man/man1/macs3_predictd.1.gz
/usr/share/man/man1/macs3_randsample.1.gz
/usr/share/man/man1/macs3_refinepeak.1.gz

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3

Використати цей пакет

OpenFactory може завантажити цю операційну систему у віртуальній машині браузера або почати збірку образу з рідною назвою пакета з цього запису.

Спробувати Debian 13 (Trixie) у браузері Зібрати образ, що містить macs

Версії, набори та репозиторії

Кожен рядок: метадані індексу пакетів для однієї версії, архітектури, набору й репозиторію. Назви, URL і розміри зі джерела; посилання є змінним місцем отримання, не перерозповсюдженням OpenFactory.

Version	Release	Architecture	Repository	Package size	Installed size	Publisher repository artifact
3.0.2-1+b3	trixie / main	amd64	Debian 13 · main · amd64	3.0 MiB	8.1 MiB	pool/main/m/macs/macs_3.0.2-1+b3_amd64.deb
3.0.2-1+b3	trixie / main	arm64	Debian 13 · main · arm64	2.7 MiB	7.9 MiB	pool/main/m/macs/macs_3.0.2-1+b3_arm64.deb

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3

Контрольні суми й дати спостереження

For an APT source, signature verification authenticates the repository metadata chain and the Packages index containing this source-reported artifact digest. It does not certify package safety.

3.0.2-1+b3 / amd64Observed Sep 1, 2026 to Sep 1, 2026

Verification status: Metadata observed; artifact bytes were not independently fetched or hashed by this catalog import. The digest below is source-reported.

Source-reported sha256: 4d282b03e0d3e1b17594844f35217a91f3c12f9618e64993b028c6a44bfa3b68

After downloading that exact artifact, compare its bytes with the source-reported expected digest:

printf '%s  %s\n' '4d282b03e0d3e1b17594844f35217a91f3c12f9618e64993b028c6a44bfa3b68' 'macs_3.0.2-1+b3_amd64.deb' | sha256sum --check --strict -

A match establishes equality with the repository metadata value. It does not establish safety or catalog-side artifact retrieval.

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3

3.0.2-1+b3 / arm64Observed Sep 1, 2026 to Sep 1, 2026

Verification status: Metadata observed; artifact bytes were not independently fetched or hashed by this catalog import. The digest below is source-reported.

Source-reported sha256: 14ac698e9b6807fb94c7dccee5f2f3c277b60c3be835f90d5b52c4dbbbe16919

After downloading that exact artifact, compare its bytes with the source-reported expected digest:

printf '%s  %s\n' '14ac698e9b6807fb94c7dccee5f2f3c277b60c3be835f90d5b52c4dbbbe16919' 'macs_3.0.2-1+b3_arm64.deb' | sha256sum --check --strict -

A match establishes equality with the repository metadata value. It does not establish safety or catalog-side artifact retrieval.

Field source: Debian 13 (Trixie) main arm64 revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908

Повнота запису каталогу

The completeness score measures metadata coverage, not software quality, security, compatibility, or suitability.

Summary and description: 25/25
Artifact path and source digest: 25/25
Dependency metadata: 15/15
Package-file index: 15/15
Homepage: 5/5
License text: 0/5
Source package or maintainer: 10/10

Recorded total: 95/100

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3, Debian 13 (Trixie) main arm64 revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908. The cross-OS mapping is catalog-derived from the source-reported homepage; it does not establish authorship or publisher identity

Джерела та походження

Field-source links above resolve here. Each source entry names the metadata publisher, trust tier, exact snapshot revision, signature result, and observation time; catalog-derived mappings are labeled separately.

Debian 13 (Trixie) main amd64Sep 1, 2026
Authoritative source; repository metadata signature verified, revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.
Repository-signature verification record
Signed object
https://deb.debian.org/debian/dists/trixie/InRelease
Signed-object SHA-256
98b25b5cd185c59d34aa6e4c3e9b5b8f01bbe9d104fe2dcfbcd30dc0a14a59ed
Signer fingerprint
4CB50190207B4758A3F73A796ED0E7B82643E131
Keyring revision
debian-archive-keyring.gpg
SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
Tool and policy
gpgv (GnuPG) 2.4.9
openfactory-software-catalog-signature-v1
Verification time
Sep 1, 2026
Signed Release → package-index hash linkage
Path: main/binary-amd64/Packages.xz
Expected SHA-256: 3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
Observed SHA-256: 3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
Result: match verified
Debian 13 (Trixie) main arm64Sep 1, 2026
Authoritative source; repository metadata signature verified, revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908
Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.
Repository-signature verification record
Signed object
https://deb.debian.org/debian/dists/trixie/InRelease
Signed-object SHA-256
98b25b5cd185c59d34aa6e4c3e9b5b8f01bbe9d104fe2dcfbcd30dc0a14a59ed
Signer fingerprint
4CB50190207B4758A3F73A796ED0E7B82643E131
Keyring revision
debian-archive-keyring.gpg
SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
Tool and policy
gpgv (GnuPG) 2.4.9
openfactory-software-catalog-signature-v1
Verification time
Sep 1, 2026
Signed Release → package-index hash linkage
Path: main/binary-arm64/Packages.xz
Expected SHA-256: 753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908
Observed SHA-256: 753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908
Result: match verified