Debian 13 (Trixie) native package

phyml

Phylogenetic estimation using Maximum Likelihood

Packages / Debian 13 (Trixie) / science / phyml

[Source: phyml]

Package: phyml (3:3.3.20220408-4+b1)

Maintainers:

Debian Med Packaging Team

External Resources:

Homepage: [www.atgc-montpellier.fr]

Phylogenetic estimation using Maximum Likelihood

Other Packages Related to phyml:

dep: [libc6] (>= 2.34)
GNU C Library: Shared libraries
dep: [libopenmpi40] (>= 5.0.6)
high performance message passing library -- shared library
dep: [mpi-default-bin]
Standard MPI runtime programs (metapackage)

Download phyml

Architecture	Package Size	Installed Size	Files
amd64	1.1 MiB	4.4 MiB	[list of files]
arm64	1.0 MiB	4.0 MiB	[list of files]

Шляхи файлів пакета (28)

Paths come from the repository package-file index for the observed builds. They describe archive/package associations, not every file that will exist on a running system after maintainer scripts, alternatives, generated state, diversions, or installation choices.

/usr/bin/phyml
/usr/bin/phyml-mpi
/usr/lib/phyml/bin/phyml
/usr/lib/phyml/bin/phyml-mpi
/usr/share/doc-base/phyml.phyml
/usr/share/doc/phyml/changelog.Debian.amd64.gz
/usr/share/doc/phyml/changelog.Debian.arm64.gz
/usr/share/doc/phyml/changelog.Debian.gz
/usr/share/doc/phyml/copyright
/usr/share/doc/phyml/examples/example.nex
/usr/share/doc/phyml/examples/lg4x/lg4x.xml
/usr/share/doc/phyml/examples/lg4x/X1.mat
/usr/share/doc/phyml/examples/lg4x/X2.mat
/usr/share/doc/phyml/examples/lg4x/X3.mat
/usr/share/doc/phyml/examples/lg4x/X4.mat
/usr/share/doc/phyml/examples/nexus_example.nxs
/usr/share/doc/phyml/examples/nucleic
/usr/share/doc/phyml/examples/phyrex/flu.xml
/usr/share/doc/phyml/examples/phyrex/h1n1.nxs
/usr/share/doc/phyml/examples/phyrex/usa_coord.txt
/usr/share/doc/phyml/examples/phytime/dating_example.xml
/usr/share/doc/phyml/examples/phytime/seq.txt
/usr/share/doc/phyml/examples/proteic
/usr/share/doc/phyml/phyml_manual.pdf
/usr/share/doc/phyml/README.Debian
/usr/share/doc/phyml/run-unit-test
/usr/share/man/man1/phyml.1.gz
/usr/share/man/man1/phyml-mpi.1.gz

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3

Використати цей пакет

OpenFactory може завантажити цю операційну систему у віртуальній машині браузера або почати збірку образу з рідною назвою пакета з цього запису.

Спробувати Debian 13 (Trixie) у браузері Зібрати образ, що містить phyml

Версії, набори та репозиторії

Кожен рядок: метадані індексу пакетів для однієї версії, архітектури, набору й репозиторію. Назви, URL і розміри зі джерела; посилання є змінним місцем отримання, не перерозповсюдженням OpenFactory.

Version	Release	Architecture	Repository	Package size	Installed size	Publisher repository artifact
3:3.3.20220408-4+b1	trixie / main	amd64	Debian 13 · main · amd64	1.1 MiB	4.4 MiB	pool/main/p/phyml/phyml_3.3.20220408-4+b1_amd64.deb
3:3.3.20220408-4+b1	trixie / main	arm64	Debian 13 · main · arm64	1.0 MiB	4.0 MiB	pool/main/p/phyml/phyml_3.3.20220408-4+b1_arm64.deb

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3

Контрольні суми й дати спостереження

For an APT source, signature verification authenticates the repository metadata chain and the Packages index containing this source-reported artifact digest. It does not certify package safety.

3:3.3.20220408-4+b1 / amd64Observed Sep 1, 2026 to Sep 1, 2026

Verification status: Metadata observed; artifact bytes were not independently fetched or hashed by this catalog import. The digest below is source-reported.

Source-reported sha256: bda4c95d8ef8db21158d1dcd9c4cad9e95b3f1f4429272c0e9f66e7c00c85990

After downloading that exact artifact, compare its bytes with the source-reported expected digest:

printf '%s  %s\n' 'bda4c95d8ef8db21158d1dcd9c4cad9e95b3f1f4429272c0e9f66e7c00c85990' 'phyml_3.3.20220408-4+b1_amd64.deb' | sha256sum --check --strict -

A match establishes equality with the repository metadata value. It does not establish safety or catalog-side artifact retrieval.

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3

3:3.3.20220408-4+b1 / arm64Observed Sep 1, 2026 to Sep 1, 2026

Verification status: Metadata observed; artifact bytes were not independently fetched or hashed by this catalog import. The digest below is source-reported.

Source-reported sha256: efb92ba7901c9d0c2ab3e4efd81cced0055f5f20cef2262a8204cf69757cfe01

After downloading that exact artifact, compare its bytes with the source-reported expected digest:

printf '%s  %s\n' 'efb92ba7901c9d0c2ab3e4efd81cced0055f5f20cef2262a8204cf69757cfe01' 'phyml_3.3.20220408-4+b1_arm64.deb' | sha256sum --check --strict -

A match establishes equality with the repository metadata value. It does not establish safety or catalog-side artifact retrieval.

Field source: Debian 13 (Trixie) main arm64 revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908

Повнота запису каталогу

The completeness score measures metadata coverage, not software quality, security, compatibility, or suitability.

Summary and description: 25/25
Artifact path and source digest: 25/25
Dependency metadata: 15/15
Package-file index: 15/15
Homepage: 5/5
License text: 0/5
Source package or maintainer: 10/10

Recorded total: 95/100

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3, Debian 13 (Trixie) main arm64 revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908. The cross-OS mapping is catalog-derived from the source-reported homepage; it does not establish authorship or publisher identity

Джерела та походження

Field-source links above resolve here. Each source entry names the metadata publisher, trust tier, exact snapshot revision, signature result, and observation time; catalog-derived mappings are labeled separately.

Debian 13 (Trixie) main amd64Sep 1, 2026
Authoritative source; repository metadata signature verified, revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.
Repository-signature verification record
Signed object
https://deb.debian.org/debian/dists/trixie/InRelease
Signed-object SHA-256
98b25b5cd185c59d34aa6e4c3e9b5b8f01bbe9d104fe2dcfbcd30dc0a14a59ed
Signer fingerprint
4CB50190207B4758A3F73A796ED0E7B82643E131
Keyring revision
debian-archive-keyring.gpg
SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
Tool and policy
gpgv (GnuPG) 2.4.9
openfactory-software-catalog-signature-v1
Verification time
Sep 1, 2026
Signed Release → package-index hash linkage
Path: main/binary-amd64/Packages.xz
Expected SHA-256: 3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
Observed SHA-256: 3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
Result: match verified
Debian 13 (Trixie) main arm64Sep 1, 2026
Authoritative source; repository metadata signature verified, revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908
Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.
Repository-signature verification record
Signed object
https://deb.debian.org/debian/dists/trixie/InRelease
Signed-object SHA-256
98b25b5cd185c59d34aa6e4c3e9b5b8f01bbe9d104fe2dcfbcd30dc0a14a59ed
Signer fingerprint
4CB50190207B4758A3F73A796ED0E7B82643E131
Keyring revision
debian-archive-keyring.gpg
SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
Tool and policy
gpgv (GnuPG) 2.4.9
openfactory-software-catalog-signature-v1
Verification time
Sep 1, 2026
Signed Release → package-index hash linkage
Path: main/binary-arm64/Packages.xz
Expected SHA-256: 753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908
Observed SHA-256: 753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908
Result: match verified