Linux workstation

Debian 13 (Trixie) native package

pinfish

Collection of tools to annotate genomes using long read transcriptomics data

Packages / Debian 13 (Trixie) / science / pinfish

[Source: pinfish]

Package: pinfish (0.1.0+ds-4+b8)

Maintainers:

Debian Med Packaging Team

External Resources:

Homepage: [github.com]

Similar packages:

Collection of tools to annotate genomes using long read transcriptomics data

Other Packages Related to pinfish:

  • dep: [libc6] (>= 2.34)

    GNU C Library: Shared libraries

  • dep: [minimap2]

    versatile pairwise aligner for genomic and spliced nucleotide sequences

  • dep: [racon]

    consensus module for raw de novo DNA assembly of long uncorrected reads

Download pinfish

ArchitecturePackage SizeInstalled SizeFiles
amd641.4 MiB8.7 MiB[list of files]
arm641.3 MiB8.5 MiB[list of files]

Шляхи файлів пакета (12)

Paths come from the repository package-file index for the observed builds. They describe archive/package associations, not every file that will exist on a running system after maintainer scripts, alternatives, generated state, diversions, or installation choices.

  • /usr/bin/cluster_gff
  • /usr/bin/collapse_partials
  • /usr/bin/polish_clusters
  • /usr/bin/spliced_bam2gff
  • /usr/share/doc/pinfish/changelog.Debian.amd64.gz
  • /usr/share/doc/pinfish/changelog.Debian.arm64.gz
  • /usr/share/doc/pinfish/changelog.Debian.gz
  • /usr/share/doc/pinfish/copyright
  • /usr/share/man/man1/cluster_gff.1.gz
  • /usr/share/man/man1/collapse_partials.1.gz
  • /usr/share/man/man1/polish_clusters.1.gz
  • /usr/share/man/man1/spliced_bam2gff.1.gz

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3

Використати цей пакет

OpenFactory може завантажити цю операційну систему у віртуальній машині браузера або почати збірку образу з рідною назвою пакета з цього запису.

Спробувати Debian 13 (Trixie) у браузеріЗібрати образ, що містить pinfish

Версії, набори та репозиторії

Кожен рядок: метадані індексу пакетів для однієї версії, архітектури, набору й репозиторію. Назви, URL і розміри зі джерела; посилання є змінним місцем отримання, не перерозповсюдженням OpenFactory.

VersionReleaseArchitectureRepositoryPackage sizeInstalled sizePublisher repository artifact
0.1.0+ds-4+b8trixie / mainamd64Debian 13 · main · amd641.4 MiB8.7 MiBpool/main/p/pinfish/pinfish_0.1.0+ds-4+b8_amd64.deb
0.1.0+ds-4+b8trixie / mainarm64Debian 13 · main · arm641.3 MiB8.5 MiBpool/main/p/pinfish/pinfish_0.1.0+ds-4+b8_arm64.deb

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3

Контрольні суми й дати спостереження

For an APT source, signature verification authenticates the repository metadata chain and the Packages index containing this source-reported artifact digest. It does not certify package safety.

0.1.0+ds-4+b8 / amd64Observed Sep 1, 2026 to Sep 1, 2026

Verification status: Metadata observed; artifact bytes were not independently fetched or hashed by this catalog import. The digest below is source-reported.

Source-reported sha256: 788952d013d352f970546e4f06b2c93c94cb40ea33e994f27a8f8ab875173689

After downloading that exact artifact, compare its bytes with the source-reported expected digest:

printf '%s %s\n' '788952d013d352f970546e4f06b2c93c94cb40ea33e994f27a8f8ab875173689' 'pinfish_0.1.0+ds-4+b8_amd64.deb' | sha256sum --check --strict -

A match establishes equality with the repository metadata value. It does not establish safety or catalog-side artifact retrieval.

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3

0.1.0+ds-4+b8 / arm64Observed Sep 1, 2026 to Sep 1, 2026

Verification status: Metadata observed; artifact bytes were not independently fetched or hashed by this catalog import. The digest below is source-reported.

Source-reported sha256: e1d149760a2021c9179a008126db61fa9b0c47a5670a3de47dff15277cc5c0e5

After downloading that exact artifact, compare its bytes with the source-reported expected digest:

printf '%s %s\n' 'e1d149760a2021c9179a008126db61fa9b0c47a5670a3de47dff15277cc5c0e5' 'pinfish_0.1.0+ds-4+b8_arm64.deb' | sha256sum --check --strict -

A match establishes equality with the repository metadata value. It does not establish safety or catalog-side artifact retrieval.

Field source: Debian 13 (Trixie) main arm64 revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908

Повнота запису каталогу

The completeness score measures metadata coverage, not software quality, security, compatibility, or suitability.

Summary and description
25/25
Artifact path and source digest
25/25
Dependency metadata
15/15
Package-file index
15/15
Homepage
5/5
License text
0/5
Source package or maintainer
10/10

Recorded total: 95/100

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3, Debian 13 (Trixie) main arm64 revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908. The cross-OS mapping is catalog-derived from the source-reported homepage; it does not establish authorship or publisher identity

Джерела та походження

Field-source links above resolve here. Each source entry names the metadata publisher, trust tier, exact snapshot revision, signature result, and observation time; catalog-derived mappings are labeled separately.

  • Debian 13 (Trixie) main amd64Sep 1, 2026

    Authoritative source; repository metadata signature verified, revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3

    Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.

    Repository-signature verification record
    Signed-object SHA-256
    98b25b5cd185c59d34aa6e4c3e9b5b8f01bbe9d104fe2dcfbcd30dc0a14a59ed
    Signer fingerprint
    4CB50190207B4758A3F73A796ED0E7B82643E131
    Keyring revision
    debian-archive-keyring.gpg
    SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
    Tool and policy
    gpgv (GnuPG) 2.4.9
    openfactory-software-catalog-signature-v1
    Verification time
    Sep 1, 2026
    Signed Release → package-index hash linkage

    Path: main/binary-amd64/Packages.xz
    Expected SHA-256: 3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
    Observed SHA-256: 3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
    Result: match verified

  • Debian 13 (Trixie) main arm64Sep 1, 2026

    Authoritative source; repository metadata signature verified, revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908

    Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.

    Repository-signature verification record
    Signed-object SHA-256
    98b25b5cd185c59d34aa6e4c3e9b5b8f01bbe9d104fe2dcfbcd30dc0a14a59ed
    Signer fingerprint
    4CB50190207B4758A3F73A796ED0E7B82643E131
    Keyring revision
    debian-archive-keyring.gpg
    SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
    Tool and policy
    gpgv (GnuPG) 2.4.9
    openfactory-software-catalog-signature-v1
    Verification time
    Sep 1, 2026
    Signed Release → package-index hash linkage

    Path: main/binary-arm64/Packages.xz
    Expected SHA-256: 753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908
    Observed SHA-256: 753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908
    Result: match verified

pinfish Package for Debian 13 (Trixie) | OpenFactory