Linux workstation

Debian 13 (Trixie) native package

primer3

tool to design flanking oligo nucleotides for DNA amplification

Packages / Debian 13 (Trixie) / science / primer3

Package: primer3 (2.6.1-5)

Maintainers:

Debian Med Packaging Team

External Resources:

Homepage: [primer3.sourceforge.net]

tool to design flanking oligo nucleotides for DNA amplification

Other Packages Related to primer3:

  • dep: [libc6] (>= 2.34)

    GNU C Library: Shared libraries

  • dep: [libgcc-s1] (>= 3.0)

    GCC support library

  • dep: [libstdc++6] (>= 11)

    GNU Standard C++ Library v3

  • sug: [ncbi-epcr]

    Tool to test a DNA sequence for the presence of sequence tagged sites

  • enh: [emboss]

    European molecular biology open software suite

Download primer3

ArchitecturePackage SizeInstalled SizeFiles
amd64199 KiB806 KiB[list of files]
arm64182 KiB922 KiB[list of files]

Шляхи файлів пакета (49)

Paths come from the repository package-file index for the observed builds. They describe archive/package associations, not every file that will exist on a running system after maintainer scripts, alternatives, generated state, diversions, or installation choices.

  • /etc/primer3_config/dangle.dh
  • /etc/primer3_config/dangle.ds
  • /etc/primer3_config/interpretations/dangle_i.dh
  • /etc/primer3_config/interpretations/dangle_i.ds
  • /etc/primer3_config/interpretations/loops_i.dh
  • /etc/primer3_config/interpretations/loops_i.ds
  • /etc/primer3_config/interpretations/stack_i.dh
  • /etc/primer3_config/interpretations/stack_i.ds
  • /etc/primer3_config/interpretations/stackmm_i_mm.dh
  • /etc/primer3_config/interpretations/stackmm_i_mm.ds
  • /etc/primer3_config/interpretations/tetraloop_i.dh
  • /etc/primer3_config/interpretations/tetraloop_i.ds
  • /etc/primer3_config/interpretations/triloop_i.dh
  • /etc/primer3_config/interpretations/triloop_i.ds
  • /etc/primer3_config/interpretations/tstack2_i.dh
  • /etc/primer3_config/interpretations/tstack2_i.ds
  • /etc/primer3_config/interpretations/tstack_i.dh
  • /etc/primer3_config/interpretations/tstack_i.ds
  • /etc/primer3_config/interpretations/tstack_tm_inf_i.dh
  • /etc/primer3_config/interpretations/tstack_tm_inf_i.ds
  • /etc/primer3_config/loops.dh
  • /etc/primer3_config/loops.ds
  • /etc/primer3_config/stack.dh
  • /etc/primer3_config/stack.ds
  • /etc/primer3_config/stackmm.dh
  • /etc/primer3_config/stackmm.ds
  • /etc/primer3_config/tetraloop.dh
  • /etc/primer3_config/tetraloop.ds
  • /etc/primer3_config/triloop.dh
  • /etc/primer3_config/triloop.ds
  • /etc/primer3_config/tstack2.dh
  • /etc/primer3_config/tstack2.ds
  • /etc/primer3_config/tstack.dh
  • /etc/primer3_config/tstack_tm_inf.ds
  • /usr/bin/ntdpal
  • /usr/bin/ntthal
  • /usr/bin/oligotm
  • /usr/bin/primer3_core
  • /usr/share/doc-base/primer3.primer3-manual
  • /usr/share/doc/primer3/changelog.Debian.gz
  • /usr/share/doc/primer3/copyright
  • /usr/share/doc/primer3/examples/example
  • /usr/share/doc/primer3/primer3_manual.htm
  • /usr/share/doc/primer3/README.test
  • /usr/share/doc/primer3/release_notes.txt.gz
  • /usr/share/man/man1/ntdpal.1.gz
  • /usr/share/man/man1/ntthal.1.gz
  • /usr/share/man/man1/oligotm.1.gz
  • /usr/share/man/man1/primer3_core.1.gz

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3

Використати цей пакет

OpenFactory може завантажити цю операційну систему у віртуальній машині браузера або почати збірку образу з рідною назвою пакета з цього запису.

Спробувати Debian 13 (Trixie) у браузеріЗібрати образ, що містить primer3

Версії, набори та репозиторії

Кожен рядок: метадані індексу пакетів для однієї версії, архітектури, набору й репозиторію. Назви, URL і розміри зі джерела; посилання є змінним місцем отримання, не перерозповсюдженням OpenFactory.

VersionReleaseArchitectureRepositoryPackage sizeInstalled sizePublisher repository artifact
2.6.1-5trixie / mainamd64Debian 13 · main · amd64199 KiB806 KiBpool/main/p/primer3/primer3_2.6.1-5_amd64.deb
2.6.1-5trixie / mainarm64Debian 13 · main · arm64182 KiB922 KiBpool/main/p/primer3/primer3_2.6.1-5_arm64.deb

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3

Контрольні суми й дати спостереження

For an APT source, signature verification authenticates the repository metadata chain and the Packages index containing this source-reported artifact digest. It does not certify package safety.

2.6.1-5 / amd64Observed Sep 1, 2026 to Sep 1, 2026

Verification status: Metadata observed; artifact bytes were not independently fetched or hashed by this catalog import. The digest below is source-reported.

Source-reported sha256: c99fbfcae72169cf64490878dda2ef4d7be16b6b3a187e2e813d61eae347ad8f

After downloading that exact artifact, compare its bytes with the source-reported expected digest:

printf '%s %s\n' 'c99fbfcae72169cf64490878dda2ef4d7be16b6b3a187e2e813d61eae347ad8f' 'primer3_2.6.1-5_amd64.deb' | sha256sum --check --strict -

A match establishes equality with the repository metadata value. It does not establish safety or catalog-side artifact retrieval.

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3

2.6.1-5 / arm64Observed Sep 1, 2026 to Sep 1, 2026

Verification status: Metadata observed; artifact bytes were not independently fetched or hashed by this catalog import. The digest below is source-reported.

Source-reported sha256: 98a517e19c76577632668af5a65592df4c9f6da8487640867d4df8b38cde90c8

After downloading that exact artifact, compare its bytes with the source-reported expected digest:

printf '%s %s\n' '98a517e19c76577632668af5a65592df4c9f6da8487640867d4df8b38cde90c8' 'primer3_2.6.1-5_arm64.deb' | sha256sum --check --strict -

A match establishes equality with the repository metadata value. It does not establish safety or catalog-side artifact retrieval.

Field source: Debian 13 (Trixie) main arm64 revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908

Повнота запису каталогу

The completeness score measures metadata coverage, not software quality, security, compatibility, or suitability.

Summary and description
25/25
Artifact path and source digest
25/25
Dependency metadata
15/15
Package-file index
15/15
Homepage
5/5
License text
0/5
Source package or maintainer
10/10

Recorded total: 95/100

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3, Debian 13 (Trixie) main arm64 revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908. The cross-OS mapping is catalog-derived from the source-reported homepage; it does not establish authorship or publisher identity

Джерела та походження

Field-source links above resolve here. Each source entry names the metadata publisher, trust tier, exact snapshot revision, signature result, and observation time; catalog-derived mappings are labeled separately.

  • Debian 13 (Trixie) main amd64Sep 1, 2026

    Authoritative source; repository metadata signature verified, revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3

    Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.

    Repository-signature verification record
    Signed-object SHA-256
    98b25b5cd185c59d34aa6e4c3e9b5b8f01bbe9d104fe2dcfbcd30dc0a14a59ed
    Signer fingerprint
    4CB50190207B4758A3F73A796ED0E7B82643E131
    Keyring revision
    debian-archive-keyring.gpg
    SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
    Tool and policy
    gpgv (GnuPG) 2.4.9
    openfactory-software-catalog-signature-v1
    Verification time
    Sep 1, 2026
    Signed Release → package-index hash linkage

    Path: main/binary-amd64/Packages.xz
    Expected SHA-256: 3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
    Observed SHA-256: 3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
    Result: match verified

  • Debian 13 (Trixie) main arm64Sep 1, 2026

    Authoritative source; repository metadata signature verified, revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908

    Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.

    Repository-signature verification record
    Signed-object SHA-256
    98b25b5cd185c59d34aa6e4c3e9b5b8f01bbe9d104fe2dcfbcd30dc0a14a59ed
    Signer fingerprint
    4CB50190207B4758A3F73A796ED0E7B82643E131
    Keyring revision
    debian-archive-keyring.gpg
    SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
    Tool and policy
    gpgv (GnuPG) 2.4.9
    openfactory-software-catalog-signature-v1
    Verification time
    Sep 1, 2026
    Signed Release → package-index hash linkage

    Path: main/binary-arm64/Packages.xz
    Expected SHA-256: 753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908
    Observed SHA-256: 753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908
    Result: match verified

primer3 Package for Debian 13 (Trixie) | OpenFactory