Linux workstation

Debian 13 (Trixie) native package

r-cran-alakazam

Immunoglobulin Clonal Lineage and Diversity Analysis

Packages / Debian 13 (Trixie) / science / r-cran-alakazam

[Source: r-cran-alakazam]

Package: r-cran-alakazam (1.3.0-1+b1)

Maintainers:

Debian R Packages Maintainers

External Resources:

Homepage: [cran.r-project.org]

Immunoglobulin Clonal Lineage and Diversity Analysis

Other Packages Related to r-cran-alakazam:

  • dep: r-api-4.0

    Package not available

  • dep: [r-cran-ggplot2] (>= 3.4.0)

    implementation of the Grammar of Graphics

  • dep: [r-cran-airr] (>= 1.4.1)

    GNU R AIRR data representation reference library

  • dep: [r-cran-ape]

    GNU R package for Analyses of Phylogenetics and Evolution

  • dep: [r-cran-dplyr] (>= 1.0)

    GNU R grammar of data manipulation

  • dep: [r-cran-igraph] (>= 1.5.0)

    GNU R network analysis and visualization

  • dep: [r-cran-matrix] (>= 1.3-0)

    GNU R package of classes for dense and sparse matrices

  • dep: [r-cran-progress]

    GNU R terminal progress bars

  • dep: [r-cran-rcpp] (>= 0.12.12)

    GNU R package for Seamless R and C++ Integration

  • dep: [r-cran-readr]

    GNU R package to read rectangular text data

  • dep: [r-cran-rlang]

    Functions for Base Types and Core R and 'Tidyverse' Features

  • dep: [r-cran-scales]

    Scale functions for visualization

  • dep: [r-cran-seqinr]

    GNU R biological sequences retrieval and analysis

  • dep: [r-cran-stringi]

    GNU R character string processing facilities

  • dep: [r-cran-tibble]

    GNU R Simple Data Frames

  • dep: [r-cran-tidyr] (>= 1.0)

    GNU R package to easily tidy data

  • dep: [r-bioc-biostrings] (>= 2.56.0)

    GNU R string objects representing biological sequences

  • dep: [r-bioc-genomicalignments] (>= 1.24.0)

    BioConductor representation and manipulation of short genomic alignments

  • dep: [r-bioc-iranges] (>= 2.22.2)

    GNU R low-level containers for storing sets of integer ranges

  • dep: [libc6] (>= 2.17)

    GNU C Library: Shared libraries

  • dep: [libgcc-s1] (>= 3.0)

    GCC support library

  • dep: [libstdc++6] (>= 14)

    GNU Standard C++ Library v3

Download r-cran-alakazam

ArchitecturePackage SizeInstalled SizeFiles
amd642.3 MiB2.8 MiB[list of files]
arm642.3 MiB2.8 MiB[list of files]

Шляхи файлів пакета (58)

Paths come from the repository package-file index for the observed builds. They describe archive/package associations, not every file that will exist on a running system after maintainer scripts, alternatives, generated state, diversions, or installation choices.

  • /usr/lib/R/site-library/alakazam/CITATION
  • /usr/lib/R/site-library/alakazam/data/Rdata.rdb
  • /usr/lib/R/site-library/alakazam/data/Rdata.rds
  • /usr/lib/R/site-library/alakazam/data/Rdata.rdx
  • /usr/lib/R/site-library/alakazam/DESCRIPTION
  • /usr/lib/R/site-library/alakazam/doc/AminoAcids-Vignette.pdf
  • /usr/lib/R/site-library/alakazam/doc/AminoAcids-Vignette.R
  • /usr/lib/R/site-library/alakazam/doc/AminoAcids-Vignette.Rmd
  • /usr/lib/R/site-library/alakazam/doc/Diversity-Vignette.pdf
  • /usr/lib/R/site-library/alakazam/doc/Diversity-Vignette.R
  • /usr/lib/R/site-library/alakazam/doc/Diversity-Vignette.Rmd
  • /usr/lib/R/site-library/alakazam/doc/Fastq-Vignette.pdf
  • /usr/lib/R/site-library/alakazam/doc/Fastq-Vignette.R
  • /usr/lib/R/site-library/alakazam/doc/Fastq-Vignette.Rmd
  • /usr/lib/R/site-library/alakazam/doc/Files-Vignette.pdf
  • /usr/lib/R/site-library/alakazam/doc/Files-Vignette.R
  • /usr/lib/R/site-library/alakazam/doc/Files-Vignette.Rmd
  • /usr/lib/R/site-library/alakazam/doc/GeneUsage-Vignette.pdf
  • /usr/lib/R/site-library/alakazam/doc/GeneUsage-Vignette.R
  • /usr/lib/R/site-library/alakazam/doc/GeneUsage-Vignette.Rmd
  • /usr/lib/R/site-library/alakazam/doc/index.html
  • /usr/lib/R/site-library/alakazam/doc/Lineage-Vignette.pdf
  • /usr/lib/R/site-library/alakazam/doc/Lineage-Vignette.R
  • /usr/lib/R/site-library/alakazam/doc/Lineage-Vignette.Rmd
  • /usr/lib/R/site-library/alakazam/doc/Topology-Vignette.pdf
  • /usr/lib/R/site-library/alakazam/doc/Topology-Vignette.R
  • /usr/lib/R/site-library/alakazam/doc/Topology-Vignette.Rmd
  • /usr/lib/R/site-library/alakazam/extdata/example_airr.tsv.gz
  • /usr/lib/R/site-library/alakazam/extdata/example_changeo.tab.gz
  • /usr/lib/R/site-library/alakazam/extdata/example_quality.fastq
  • /usr/lib/R/site-library/alakazam/extdata/example_quality.tsv
  • /usr/lib/R/site-library/alakazam/help/alakazam.rdb
  • /usr/lib/R/site-library/alakazam/help/alakazam.rdx
  • /usr/lib/R/site-library/alakazam/help/aliases.rds
  • /usr/lib/R/site-library/alakazam/help/AnIndex
  • /usr/lib/R/site-library/alakazam/help/paths.rds
  • /usr/lib/R/site-library/alakazam/html/00Index.html
  • /usr/lib/R/site-library/alakazam/html/R.css
  • /usr/lib/R/site-library/alakazam/INDEX
  • /usr/lib/R/site-library/alakazam/libs/alakazam.so
  • /usr/lib/R/site-library/alakazam/Meta/data.rds
  • /usr/lib/R/site-library/alakazam/Meta/features.rds
  • /usr/lib/R/site-library/alakazam/Meta/hsearch.rds
  • /usr/lib/R/site-library/alakazam/Meta/links.rds
  • /usr/lib/R/site-library/alakazam/Meta/nsInfo.rds
  • /usr/lib/R/site-library/alakazam/Meta/package.rds
  • /usr/lib/R/site-library/alakazam/Meta/Rd.rds
  • /usr/lib/R/site-library/alakazam/Meta/vignette.rds
  • /usr/lib/R/site-library/alakazam/NAMESPACE
  • /usr/lib/R/site-library/alakazam/NEWS.md
  • /usr/lib/R/site-library/alakazam/R/alakazam
  • /usr/lib/R/site-library/alakazam/R/alakazam.rdb
  • /usr/lib/R/site-library/alakazam/R/alakazam.rdx
  • /usr/lib/R/site-library/alakazam/R/sysdata.rdb
  • /usr/lib/R/site-library/alakazam/R/sysdata.rdx
  • /usr/share/doc/r-cran-alakazam/changelog.Debian.arm64.gz
  • /usr/share/doc/r-cran-alakazam/changelog.Debian.gz
  • /usr/share/doc/r-cran-alakazam/copyright

Field source: Debian 13 (Trixie) main arm64 revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908

Використати цей пакет

OpenFactory може завантажити цю операційну систему у віртуальній машині браузера або почати збірку образу з рідною назвою пакета з цього запису.

Спробувати Debian 13 (Trixie) у браузеріЗібрати образ, що містить r-cran-alakazam

Версії, набори та репозиторії

Кожен рядок: метадані індексу пакетів для однієї версії, архітектури, набору й репозиторію. Назви, URL і розміри зі джерела; посилання є змінним місцем отримання, не перерозповсюдженням OpenFactory.

VersionReleaseArchitectureRepositoryPackage sizeInstalled sizePublisher repository artifact
1.3.0-1+b1trixie / mainarm64Debian 13 · main · arm642.3 MiB2.8 MiBpool/main/r/r-cran-alakazam/r-cran-alakazam_1.3.0-1+b1_arm64.deb
1.3.0-1trixie / mainamd64Debian 13 · main · amd642.3 MiB2.8 MiBpool/main/r/r-cran-alakazam/r-cran-alakazam_1.3.0-1_amd64.deb

Field source: Debian 13 (Trixie) main arm64 revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908

Контрольні суми й дати спостереження

For an APT source, signature verification authenticates the repository metadata chain and the Packages index containing this source-reported artifact digest. It does not certify package safety.

1.3.0-1+b1 / arm64Observed Sep 1, 2026 to Sep 1, 2026

Verification status: Metadata observed; artifact bytes were not independently fetched or hashed by this catalog import. The digest below is source-reported.

Source-reported sha256: ac3b48c888fd21d226d58268456fff663ce2a55555f63991d8945302ca71e031

After downloading that exact artifact, compare its bytes with the source-reported expected digest:

printf '%s %s\n' 'ac3b48c888fd21d226d58268456fff663ce2a55555f63991d8945302ca71e031' 'r-cran-alakazam_1.3.0-1+b1_arm64.deb' | sha256sum --check --strict -

A match establishes equality with the repository metadata value. It does not establish safety or catalog-side artifact retrieval.

Field source: Debian 13 (Trixie) main arm64 revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908

1.3.0-1 / amd64Observed Sep 1, 2026 to Sep 1, 2026

Verification status: Metadata observed; artifact bytes were not independently fetched or hashed by this catalog import. The digest below is source-reported.

Source-reported sha256: b54192daadfec052475cc2e0ea0dd73b7a4708edd14124f42d32c7ca9dd9d846

After downloading that exact artifact, compare its bytes with the source-reported expected digest:

printf '%s %s\n' 'b54192daadfec052475cc2e0ea0dd73b7a4708edd14124f42d32c7ca9dd9d846' 'r-cran-alakazam_1.3.0-1_amd64.deb' | sha256sum --check --strict -

A match establishes equality with the repository metadata value. It does not establish safety or catalog-side artifact retrieval.

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3

Повнота запису каталогу

The completeness score measures metadata coverage, not software quality, security, compatibility, or suitability.

Summary and description
25/25
Artifact path and source digest
25/25
Dependency metadata
15/15
Package-file index
15/15
Homepage
5/5
License text
0/5
Source package or maintainer
10/10

Recorded total: 95/100

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3, Debian 13 (Trixie) main arm64 revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908. The cross-OS mapping is catalog-derived from the source-reported homepage; it does not establish authorship or publisher identity

Джерела та походження

Field-source links above resolve here. Each source entry names the metadata publisher, trust tier, exact snapshot revision, signature result, and observation time; catalog-derived mappings are labeled separately.

  • Debian 13 (Trixie) main amd64Sep 1, 2026

    Authoritative source; repository metadata signature verified, revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3

    Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.

    Repository-signature verification record
    Signed-object SHA-256
    98b25b5cd185c59d34aa6e4c3e9b5b8f01bbe9d104fe2dcfbcd30dc0a14a59ed
    Signer fingerprint
    4CB50190207B4758A3F73A796ED0E7B82643E131
    Keyring revision
    debian-archive-keyring.gpg
    SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
    Tool and policy
    gpgv (GnuPG) 2.4.9
    openfactory-software-catalog-signature-v1
    Verification time
    Sep 1, 2026
    Signed Release → package-index hash linkage

    Path: main/binary-amd64/Packages.xz
    Expected SHA-256: 3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
    Observed SHA-256: 3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
    Result: match verified

  • Debian 13 (Trixie) main arm64Sep 1, 2026

    Authoritative source; repository metadata signature verified, revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908

    Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.

    Repository-signature verification record
    Signed-object SHA-256
    98b25b5cd185c59d34aa6e4c3e9b5b8f01bbe9d104fe2dcfbcd30dc0a14a59ed
    Signer fingerprint
    4CB50190207B4758A3F73A796ED0E7B82643E131
    Keyring revision
    debian-archive-keyring.gpg
    SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
    Tool and policy
    gpgv (GnuPG) 2.4.9
    openfactory-software-catalog-signature-v1
    Verification time
    Sep 1, 2026
    Signed Release → package-index hash linkage

    Path: main/binary-arm64/Packages.xz
    Expected SHA-256: 753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908
    Observed SHA-256: 753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908
    Result: match verified

r-cran-alakazam Package for Debian 13 (Trixie) | OpenFactory