Linux workstation

Debian 13 (Trixie) native package

sga

de novo genome assembler that uses string graphs

Packages / Debian 13 (Trixie) / science / sga

[Source: sga]

Package: sga (0.10.15-7+b1)

Maintainers:

Debian Med Packaging Team

External Resources:

Homepage: [github.com]

de novo genome assembler that uses string graphs

Other Packages Related to sga:

  • dep: [libbamtools2.5.2] (>= 2.5.2+dfsg)

    dynamic library for manipulating BAM (genome alignment) files

  • dep: [libc6] (>= 2.34)

    GNU C Library: Shared libraries

  • dep: [libgcc-s1] (>= 3.0)

    GCC support library

  • dep: [libgomp1] (>= 6)

    GCC OpenMP (GOMP) support library

  • dep: [libstdc++6] (>= 11)

    GNU Standard C++ Library v3

  • dep: [zlib1g] (>= 1:1.1.4)

    compression library - runtime

  • dep: [python3] [any]

    interactive high-level object-oriented language (default python3 version)

  • dep: [perl] [any]

    Larry Wall's Practical Extraction and Report Language

  • dep: [samtools]

    processing sequence alignments in SAM, BAM and CRAM formats

  • dep: [python3-ruffus]

    Python3 computation pipeline library widely used in bioinformatics

  • dep: [python3-pysam]

    interface for the SAM/BAM sequence alignment and mapping format (Python 3)

  • rec: [abyss]

    de novo, parallel, sequence assembler for short reads

Download sga

ArchitecturePackage SizeInstalled SizeFiles
amd64812 KiB2.4 MiB[list of files]
arm64580 KiB1.8 MiB[list of files]

Шляхи файлів пакета (19)

Paths come from the repository package-file index for the observed builds. They describe archive/package associations, not every file that will exist on a running system after maintainer scripts, alternatives, generated state, diversions, or installation choices.

  • /usr/bin/sga
  • /usr/bin/sga-align
  • /usr/bin/sga-astat
  • /usr/bin/sga-bam2de
  • /usr/bin/sga-mergeDriver
  • /usr/share/doc/sga/changelog.Debian.amd64.gz
  • /usr/share/doc/sga/changelog.Debian.arm64.gz
  • /usr/share/doc/sga/changelog.Debian.gz
  • /usr/share/doc/sga/copyright
  • /usr/share/doc/sga/examples/sga-celegans.sh
  • /usr/share/doc/sga/index.html
  • /usr/share/doc/sga/README.Debian
  • /usr/share/doc/sga/README.gz
  • /usr/share/doc/sga/README.md
  • /usr/share/man/man1/sga.1.gz
  • /usr/share/man/man1/sga-align.1.gz
  • /usr/share/man/man1/sga-astat.1.gz
  • /usr/share/man/man1/sga-bam2de.1.gz
  • /usr/share/man/man1/sga-mergeDriver.1.gz

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3

Використати цей пакет

OpenFactory може завантажити цю операційну систему у віртуальній машині браузера або почати збірку образу з рідною назвою пакета з цього запису.

Спробувати Debian 13 (Trixie) у браузеріЗібрати образ, що містить sga

Версії, набори та репозиторії

Кожен рядок: метадані індексу пакетів для однієї версії, архітектури, набору й репозиторію. Назви, URL і розміри зі джерела; посилання є змінним місцем отримання, не перерозповсюдженням OpenFactory.

VersionReleaseArchitectureRepositoryPackage sizeInstalled sizePublisher repository artifact
0.10.15-7+b1trixie / mainamd64Debian 13 · main · amd64812 KiB2.4 MiBpool/main/s/sga/sga_0.10.15-7+b1_amd64.deb
0.10.15-7+b1trixie / mainarm64Debian 13 · main · arm64580 KiB1.8 MiBpool/main/s/sga/sga_0.10.15-7+b1_arm64.deb

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3

Контрольні суми й дати спостереження

For an APT source, signature verification authenticates the repository metadata chain and the Packages index containing this source-reported artifact digest. It does not certify package safety.

0.10.15-7+b1 / amd64Observed Sep 1, 2026 to Sep 1, 2026

Verification status: Metadata observed; artifact bytes were not independently fetched or hashed by this catalog import. The digest below is source-reported.

Source-reported sha256: b460ca89bcd75fc7cec2069bdc1866bb05e20f938ddad9693b96279ba05a5f08

After downloading that exact artifact, compare its bytes with the source-reported expected digest:

printf '%s %s\n' 'b460ca89bcd75fc7cec2069bdc1866bb05e20f938ddad9693b96279ba05a5f08' 'sga_0.10.15-7+b1_amd64.deb' | sha256sum --check --strict -

A match establishes equality with the repository metadata value. It does not establish safety or catalog-side artifact retrieval.

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3

0.10.15-7+b1 / arm64Observed Sep 1, 2026 to Sep 1, 2026

Verification status: Metadata observed; artifact bytes were not independently fetched or hashed by this catalog import. The digest below is source-reported.

Source-reported sha256: bbbaaf5977cf41a582ca99d5d8873ec1d95a282d2700783db86affebf8ab9d0f

After downloading that exact artifact, compare its bytes with the source-reported expected digest:

printf '%s %s\n' 'bbbaaf5977cf41a582ca99d5d8873ec1d95a282d2700783db86affebf8ab9d0f' 'sga_0.10.15-7+b1_arm64.deb' | sha256sum --check --strict -

A match establishes equality with the repository metadata value. It does not establish safety or catalog-side artifact retrieval.

Field source: Debian 13 (Trixie) main arm64 revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908

Повнота запису каталогу

The completeness score measures metadata coverage, not software quality, security, compatibility, or suitability.

Summary and description
25/25
Artifact path and source digest
25/25
Dependency metadata
15/15
Package-file index
15/15
Homepage
5/5
License text
0/5
Source package or maintainer
10/10

Recorded total: 95/100

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3, Debian 13 (Trixie) main arm64 revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908. The cross-OS mapping is catalog-derived from the source-reported homepage; it does not establish authorship or publisher identity

Джерела та походження

Field-source links above resolve here. Each source entry names the metadata publisher, trust tier, exact snapshot revision, signature result, and observation time; catalog-derived mappings are labeled separately.

  • Debian 13 (Trixie) main amd64Sep 1, 2026

    Authoritative source; repository metadata signature verified, revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3

    Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.

    Repository-signature verification record
    Signed-object SHA-256
    98b25b5cd185c59d34aa6e4c3e9b5b8f01bbe9d104fe2dcfbcd30dc0a14a59ed
    Signer fingerprint
    4CB50190207B4758A3F73A796ED0E7B82643E131
    Keyring revision
    debian-archive-keyring.gpg
    SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
    Tool and policy
    gpgv (GnuPG) 2.4.9
    openfactory-software-catalog-signature-v1
    Verification time
    Sep 1, 2026
    Signed Release → package-index hash linkage

    Path: main/binary-amd64/Packages.xz
    Expected SHA-256: 3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
    Observed SHA-256: 3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
    Result: match verified

  • Debian 13 (Trixie) main arm64Sep 1, 2026

    Authoritative source; repository metadata signature verified, revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908

    Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.

    Repository-signature verification record
    Signed-object SHA-256
    98b25b5cd185c59d34aa6e4c3e9b5b8f01bbe9d104fe2dcfbcd30dc0a14a59ed
    Signer fingerprint
    4CB50190207B4758A3F73A796ED0E7B82643E131
    Keyring revision
    debian-archive-keyring.gpg
    SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
    Tool and policy
    gpgv (GnuPG) 2.4.9
    openfactory-software-catalog-signature-v1
    Verification time
    Sep 1, 2026
    Signed Release → package-index hash linkage

    Path: main/binary-arm64/Packages.xz
    Expected SHA-256: 753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908
    Observed SHA-256: 753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908
    Result: match verified

sga Package for Debian 13 (Trixie) | OpenFactory