Debian 13 (Trixie) native package

sourmash

tools for comparing DNA sequences with MinHash sketches

Packages / Debian 13 (Trixie) / python / sourmash

[Source: sourmash]

Package: sourmash (4.8.14-3+b1)

Maintainers:

Debian Med Packaging Team

External Resources:

Homepage: [github.com]

tools for comparing DNA sequences with MinHash sketches

Other Packages Related to sourmash:

dep: [python3] (>= 3~)
interactive high-level object-oriented language (default python3 version)
dep: [python3-bitstring]
Python module for manipulation of binary data (Python 3)
dep: [python3-cachetools]
extensible memoizing collections and decorators for Python 3
dep: python3-cffi-backend-api-min (<= 9729)
Package not available
dep: python3-cffi-backend-api-max (>= 9729)
Package not available
dep: [python3-deprecation]
Library to handle automated deprecations
dep: [python3-matplotlib]
Python based plotting system in a style similar to Matlab
dep: [python3-numpy]
Python library for numerical computations (Python 3)
dep: [python3-scipy]
scientific tools for Python 3
dep: [python3-screed]
short nucleotide read sequence utils in Python 3
dep: [python3] [any]
interactive high-level object-oriented language (default python3 version)
dep: [libc6] (>= 2.34)
GNU C Library: Shared libraries
dep: [libgcc-s1] (>= 4.2)
GCC support library
dep: [librocksdb9.10] (>= 9.10.0)
persistent Key-Value Store for Flash and RAM Storage

Download sourmash

Architecture	Package Size	Installed Size	Files
amd64	718 KiB	2.4 MiB	[list of files]
arm64	652 KiB	2.3 MiB	[list of files]

Шляхи файлів пакета (118)

Paths come from the repository package-file index for the observed builds. They describe archive/package associations, not every file that will exist on a running system after maintainer scripts, alternatives, generated state, diversions, or installation choices.

/usr/bin/sourmash
/usr/lib/python3/dist-packages/sourmash-4.8.14.dist-info/entry_points.txt
/usr/lib/python3/dist-packages/sourmash-4.8.14.dist-info/INSTALLER
/usr/lib/python3/dist-packages/sourmash-4.8.14.dist-info/METADATA
/usr/lib/python3/dist-packages/sourmash-4.8.14.dist-info/WHEEL
/usr/lib/python3/dist-packages/sourmash/cli/categorize.py
/usr/lib/python3/dist-packages/sourmash/cli/compare.py
/usr/lib/python3/dist-packages/sourmash/cli/compute.py
/usr/lib/python3/dist-packages/sourmash/cli/gather.py
/usr/lib/python3/dist-packages/sourmash/cli/import_csv.py
/usr/lib/python3/dist-packages/sourmash/cli/index.py
/usr/lib/python3/dist-packages/sourmash/cli/info.py
/usr/lib/python3/dist-packages/sourmash/cli/__init__.py
/usr/lib/python3/dist-packages/sourmash/cli/lca/classify.py
/usr/lib/python3/dist-packages/sourmash/cli/lca/compare_csv.py
/usr/lib/python3/dist-packages/sourmash/cli/lca/index.py
/usr/lib/python3/dist-packages/sourmash/cli/lca/__init__.py
/usr/lib/python3/dist-packages/sourmash/cli/lca/rankinfo.py
/usr/lib/python3/dist-packages/sourmash/cli/lca/summarize.py
/usr/lib/python3/dist-packages/sourmash/cli/migrate.py
/usr/lib/python3/dist-packages/sourmash/cli/multigather.py
/usr/lib/python3/dist-packages/sourmash/cli/plot.py
/usr/lib/python3/dist-packages/sourmash/cli/prefetch.py
/usr/lib/python3/dist-packages/sourmash/cli/sbt_combine.py
/usr/lib/python3/dist-packages/sourmash/cli/scripts/__init__.py
/usr/lib/python3/dist-packages/sourmash/cli/search.py
/usr/lib/python3/dist-packages/sourmash/cli/sig/cat.py
/usr/lib/python3/dist-packages/sourmash/cli/sig/check.py
/usr/lib/python3/dist-packages/sourmash/cli/sig/collect.py
/usr/lib/python3/dist-packages/sourmash/cli/sig/describe.py
/usr/lib/python3/dist-packages/sourmash/cli/sig/downsample.py
/usr/lib/python3/dist-packages/sourmash/cli/sig/export.py
/usr/lib/python3/dist-packages/sourmash/cli/sig/extract.py
/usr/lib/python3/dist-packages/sourmash/cli/sig/fileinfo.py
/usr/lib/python3/dist-packages/sourmash/cli/sig/filter.py
/usr/lib/python3/dist-packages/sourmash/cli/sig/flatten.py
/usr/lib/python3/dist-packages/sourmash/cli/sig/grep.py
/usr/lib/python3/dist-packages/sourmash/cli/sig/inflate.py
/usr/lib/python3/dist-packages/sourmash/cli/sig/ingest.py
/usr/lib/python3/dist-packages/sourmash/cli/sig/__init__.py
/usr/lib/python3/dist-packages/sourmash/cli/sig/intersect.py
/usr/lib/python3/dist-packages/sourmash/cli/sig/kmers.py
/usr/lib/python3/dist-packages/sourmash/cli/sig/manifest.py
/usr/lib/python3/dist-packages/sourmash/cli/sig/merge.py
/usr/lib/python3/dist-packages/sourmash/cli/sig/overlap.py
/usr/lib/python3/dist-packages/sourmash/cli/sig/rename.py
/usr/lib/python3/dist-packages/sourmash/cli/sig/split.py
/usr/lib/python3/dist-packages/sourmash/cli/sig/subtract.py
/usr/lib/python3/dist-packages/sourmash/cli/sketch/dna.py
/usr/lib/python3/dist-packages/sourmash/cli/sketch/fromfile.py
/usr/lib/python3/dist-packages/sourmash/cli/sketch/__init__.py
/usr/lib/python3/dist-packages/sourmash/cli/sketch/protein.py
/usr/lib/python3/dist-packages/sourmash/cli/sketch/translate.py
/usr/lib/python3/dist-packages/sourmash/cli/storage/convert.py
/usr/lib/python3/dist-packages/sourmash/cli/storage/__init__.py
/usr/lib/python3/dist-packages/sourmash/cli/tax/annotate.py
/usr/lib/python3/dist-packages/sourmash/cli/tax/genome.py
/usr/lib/python3/dist-packages/sourmash/cli/tax/grep.py
/usr/lib/python3/dist-packages/sourmash/cli/tax/__init__.py
/usr/lib/python3/dist-packages/sourmash/cli/tax/metagenome.py
/usr/lib/python3/dist-packages/sourmash/cli/tax/prepare.py
/usr/lib/python3/dist-packages/sourmash/cli/tax/summarize.py
/usr/lib/python3/dist-packages/sourmash/cli/utils.py
/usr/lib/python3/dist-packages/sourmash/cli/watch.py
/usr/lib/python3/dist-packages/sourmash/command_compute.py
/usr/lib/python3/dist-packages/sourmash/command_sketch.py
/usr/lib/python3/dist-packages/sourmash/commands.py
/usr/lib/python3/dist-packages/sourmash/compare.py
/usr/lib/python3/dist-packages/sourmash/distance_utils.py
/usr/lib/python3/dist-packages/sourmash/exceptions.py
/usr/lib/python3/dist-packages/sourmash/fig.py
/usr/lib/python3/dist-packages/sourmash/hll.py
/usr/lib/python3/dist-packages/sourmash/index/__init__.py
/usr/lib/python3/dist-packages/sourmash/index/revindex.py
/usr/lib/python3/dist-packages/sourmash/index/sqlite_index.py
/usr/lib/python3/dist-packages/sourmash/__init__.py
/usr/lib/python3/dist-packages/sourmash/lca/command_classify.py
/usr/lib/python3/dist-packages/sourmash/lca/command_compare_csv.py
/usr/lib/python3/dist-packages/sourmash/lca/command_index.py
/usr/lib/python3/dist-packages/sourmash/lca/command_rankinfo.py
/usr/lib/python3/dist-packages/sourmash/lca/command_summarize.py
/usr/lib/python3/dist-packages/sourmash/lca/__init__.py
/usr/lib/python3/dist-packages/sourmash/lca/lca_db.py
/usr/lib/python3/dist-packages/sourmash/lca/lca_utils.py
/usr/lib/python3/dist-packages/sourmash/lca/__main__.py
/usr/lib/python3/dist-packages/sourmash/logging.py
/usr/lib/python3/dist-packages/sourmash/_lowlevel/ffi.py
/usr/lib/python3/dist-packages/sourmash/_lowlevel/__init__.py
/usr/lib/python3/dist-packages/sourmash/_lowlevel/lib_lowlevel.so
/usr/lib/python3/dist-packages/sourmash/__main__.py
/usr/lib/python3/dist-packages/sourmash/manifest.py
/usr/lib/python3/dist-packages/sourmash/minhash.py
/usr/lib/python3/dist-packages/sourmash/nodegraph.py
/usr/lib/python3/dist-packages/sourmash/np_utils.py
/usr/lib/python3/dist-packages/sourmash/picklist.py
/usr/lib/python3/dist-packages/sourmash/plugins.py
/usr/lib/python3/dist-packages/sourmash/save_load.py
/usr/lib/python3/dist-packages/sourmash/sbtmh.py
/usr/lib/python3/dist-packages/sourmash/sbt.py
/usr/lib/python3/dist-packages/sourmash/sbt_storage.py
/usr/lib/python3/dist-packages/sourmash/search.py
/usr/lib/python3/dist-packages/sourmash/sig/grep.py
/usr/lib/python3/dist-packages/sourmash/sig/__init__.py
/usr/lib/python3/dist-packages/sourmash/sig/__main__.py
/usr/lib/python3/dist-packages/sourmash/signature.py
/usr/lib/python3/dist-packages/sourmash/sketchcomparison.py
/usr/lib/python3/dist-packages/sourmash/sourmash_args.py
/usr/lib/python3/dist-packages/sourmash/sqlite_utils.py
/usr/lib/python3/dist-packages/sourmash/tax/__init__.py
/usr/lib/python3/dist-packages/sourmash/tax/__main__.py
/usr/lib/python3/dist-packages/sourmash/tax/tax_utils.py
/usr/lib/python3/dist-packages/sourmash/utils.py
/usr/share/doc/sourmash/changelog.Debian.amd64.gz
/usr/share/doc/sourmash/changelog.Debian.arm64.gz
/usr/share/doc/sourmash/changelog.Debian.gz
/usr/share/doc/sourmash/copyright
/usr/share/lintian/overrides/sourmash
/usr/share/man/man1/sourmash.1.gz

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3

Використати цей пакет

OpenFactory може завантажити цю операційну систему у віртуальній машині браузера або почати збірку образу з рідною назвою пакета з цього запису.

Спробувати Debian 13 (Trixie) у браузері Зібрати образ, що містить sourmash

Версії, набори та репозиторії

Кожен рядок: метадані індексу пакетів для однієї версії, архітектури, набору й репозиторію. Назви, URL і розміри зі джерела; посилання є змінним місцем отримання, не перерозповсюдженням OpenFactory.

Version	Release	Architecture	Repository	Package size	Installed size	Publisher repository artifact
4.8.14-3+b1	trixie / main	amd64	Debian 13 · main · amd64	718 KiB	2.4 MiB	pool/main/s/sourmash/sourmash_4.8.14-3+b1_amd64.deb
4.8.14-3+b1	trixie / main	arm64	Debian 13 · main · arm64	652 KiB	2.3 MiB	pool/main/s/sourmash/sourmash_4.8.14-3+b1_arm64.deb

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3

Контрольні суми й дати спостереження

For an APT source, signature verification authenticates the repository metadata chain and the Packages index containing this source-reported artifact digest. It does not certify package safety.

4.8.14-3+b1 / amd64Observed Sep 1, 2026 to Sep 1, 2026

Verification status: Metadata observed; artifact bytes were not independently fetched or hashed by this catalog import. The digest below is source-reported.

Source-reported sha256: 22d17ac7f20ec6b6eff9bdf81031bca96372d082b050bc6f6958c70069b17475

After downloading that exact artifact, compare its bytes with the source-reported expected digest:

printf '%s  %s\n' '22d17ac7f20ec6b6eff9bdf81031bca96372d082b050bc6f6958c70069b17475' 'sourmash_4.8.14-3+b1_amd64.deb' | sha256sum --check --strict -

A match establishes equality with the repository metadata value. It does not establish safety or catalog-side artifact retrieval.

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3

4.8.14-3+b1 / arm64Observed Sep 1, 2026 to Sep 1, 2026

Verification status: Metadata observed; artifact bytes were not independently fetched or hashed by this catalog import. The digest below is source-reported.

Source-reported sha256: f2b4f21b14e03ba3dd08ea600adc49695d5e464bd8d815326672525bc3c202fb

After downloading that exact artifact, compare its bytes with the source-reported expected digest:

printf '%s  %s\n' 'f2b4f21b14e03ba3dd08ea600adc49695d5e464bd8d815326672525bc3c202fb' 'sourmash_4.8.14-3+b1_arm64.deb' | sha256sum --check --strict -

A match establishes equality with the repository metadata value. It does not establish safety or catalog-side artifact retrieval.

Field source: Debian 13 (Trixie) main arm64 revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908

Повнота запису каталогу

The completeness score measures metadata coverage, not software quality, security, compatibility, or suitability.

Summary and description: 25/25
Artifact path and source digest: 25/25
Dependency metadata: 15/15
Package-file index: 15/15
Homepage: 5/5
License text: 0/5
Source package or maintainer: 10/10

Recorded total: 95/100

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3, Debian 13 (Trixie) main arm64 revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908. The cross-OS mapping is catalog-derived from the source-reported homepage; it does not establish authorship or publisher identity

Джерела та походження

Field-source links above resolve here. Each source entry names the metadata publisher, trust tier, exact snapshot revision, signature result, and observation time; catalog-derived mappings are labeled separately.

Debian 13 (Trixie) main amd64Sep 1, 2026
Authoritative source; repository metadata signature verified, revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.
Repository-signature verification record
Signed object
https://deb.debian.org/debian/dists/trixie/InRelease
Signed-object SHA-256
98b25b5cd185c59d34aa6e4c3e9b5b8f01bbe9d104fe2dcfbcd30dc0a14a59ed
Signer fingerprint
4CB50190207B4758A3F73A796ED0E7B82643E131
Keyring revision
debian-archive-keyring.gpg
SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
Tool and policy
gpgv (GnuPG) 2.4.9
openfactory-software-catalog-signature-v1
Verification time
Sep 1, 2026
Signed Release → package-index hash linkage
Path: main/binary-amd64/Packages.xz
Expected SHA-256: 3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
Observed SHA-256: 3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
Result: match verified
Debian 13 (Trixie) main arm64Sep 1, 2026
Authoritative source; repository metadata signature verified, revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908
Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.
Repository-signature verification record
Signed object
https://deb.debian.org/debian/dists/trixie/InRelease
Signed-object SHA-256
98b25b5cd185c59d34aa6e4c3e9b5b8f01bbe9d104fe2dcfbcd30dc0a14a59ed
Signer fingerprint
4CB50190207B4758A3F73A796ED0E7B82643E131
Keyring revision
debian-archive-keyring.gpg
SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
Tool and policy
gpgv (GnuPG) 2.4.9
openfactory-software-catalog-signature-v1
Verification time
Sep 1, 2026
Signed Release → package-index hash linkage
Path: main/binary-arm64/Packages.xz
Expected SHA-256: 753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908
Observed SHA-256: 753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908
Result: match verified