Linux workstation

Debian 13 (Trixie) native package

t-coffee

Multiple Sequence Alignment

Packages / Debian 13 (Trixie) / science / t-coffee

[Source: t-coffee]

Package: t-coffee (13.45.0.4846264+really13.41.0.28bdc39+dfsg-1+b1)

Maintainers:

Debian Med Packaging Team

External Resources:

Homepage: [www.tcoffee.org]

Similar packages:

Multiple Sequence Alignment

Other Packages Related to t-coffee:

  • dep: [libc6] (>= 2.38)

    GNU C Library: Shared libraries

  • dep: [libgcc-s1] (>= 3.0)

    GCC support library

  • dep: [libstdc++6] (>= 13.1)

    GNU Standard C++ Library v3

  • rec: [amap-align]

    Protein multiple alignment by sequence annealing

  • rec: [clustalo]

    General-purpose multiple sequence alignment program for proteins

  • rec: [clustalw]

    global multiple nucleotide or peptide sequence alignment

  • rec: [dialign-tx]

    Segment-based multiple sequence alignment

  • rec: [fsa]

    Fast Statistical Alignment of protein, RNA or DNA sequences

  • rec: [kalign]

    Global and progressive multiple sequence alignment

  • rec: [libsoap-lite-perl]

    Perl implementation of a SOAP client and server

  • rec: [libxml-simple-perl]

    Perl module for reading and writing XML

  • rec: [mafft]

    Multiple alignment program for amino acid or nucleotide sequences

  • rec: [muscle]

    Multiple alignment program of protein sequences

  • rec: [mustang]

    multiple structural alignment of proteins

  • rec: [ncbi-blast+]

    next generation suite of BLAST sequence search tools

  • rec: [poa]

    Partial Order Alignment for multiple sequence alignment

  • rec: [prank]

    Probabilistic Alignment Kit for DNA, codon and amino-acid sequences

  • rec: [probcons]

    PROBabilistic CONSistency-based multiple sequence alignment

  • rec: [proda]

    multiple alignment of protein sequences

  • rec: [tm-align]

    structural alignment of proteins

  • sug: [boxshade]

    Pretty-printing of multiple sequence alignments

  • sug: [seaview]

    Multiplatform interface for sequence alignment and phylogeny

  • sug: [t-coffee-examples]

    annotated examples for the use of T-Coffee

Download t-coffee

ArchitecturePackage SizeInstalled SizeFiles
amd641007 KiB2.7 MiB[list of files]
arm64915 KiB2.6 MiB[list of files]

Шляхи файлів пакета (8)

Paths come from the repository package-file index for the observed builds. They describe archive/package associations, not every file that will exist on a running system after maintainer scripts, alternatives, generated state, diversions, or installation choices.

  • /usr/bin/t_coffee
  • /usr/share/doc/t-coffee/changelog.Debian.arm64.gz
  • /usr/share/doc/t-coffee/changelog.Debian.gz
  • /usr/share/doc/t-coffee/copyright
  • /usr/share/doc/t-coffee/README.Debian
  • /usr/share/doc/t-coffee/README.test
  • /usr/share/doc/t-coffee/run-unit-test
  • /usr/share/man/man1/t_coffee.1.gz

Field source: Debian 13 (Trixie) main arm64 revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908

Використати цей пакет

OpenFactory може завантажити цю операційну систему у віртуальній машині браузера або почати збірку образу з рідною назвою пакета з цього запису.

Спробувати Debian 13 (Trixie) у браузеріЗібрати образ, що містить t-coffee

Версії, набори та репозиторії

Кожен рядок: метадані індексу пакетів для однієї версії, архітектури, набору й репозиторію. Назви, URL і розміри зі джерела; посилання є змінним місцем отримання, не перерозповсюдженням OpenFactory.

VersionReleaseArchitectureRepositoryPackage sizeInstalled sizePublisher repository artifact
13.45.0.4846264+really13.41.0.28bdc39+dfsg-1+b1trixie / mainarm64Debian 13 · main · arm64915 KiB2.6 MiBpool/main/t/t-coffee/t-coffee_13.45.0.4846264+really13.41.0.28bdc39+dfsg-1+b1_arm64.deb
13.45.0.4846264+really13.41.0.28bdc39+dfsg-1trixie / mainamd64Debian 13 · main · amd641007 KiB2.7 MiBpool/main/t/t-coffee/t-coffee_13.45.0.4846264+really13.41.0.28bdc39+dfsg-1_amd64.deb

Field source: Debian 13 (Trixie) main arm64 revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908

Контрольні суми й дати спостереження

For an APT source, signature verification authenticates the repository metadata chain and the Packages index containing this source-reported artifact digest. It does not certify package safety.

13.45.0.4846264+really13.41.0.28bdc39+dfsg-1+b1 / arm64Observed Sep 1, 2026 to Sep 1, 2026

Verification status: Metadata observed; artifact bytes were not independently fetched or hashed by this catalog import. The digest below is source-reported.

Source-reported sha256: e81ed108f2004788029fadc99e84a0f1c932e68d2ae034ac978a47ececac8ff0

After downloading that exact artifact, compare its bytes with the source-reported expected digest:

printf '%s %s\n' 'e81ed108f2004788029fadc99e84a0f1c932e68d2ae034ac978a47ececac8ff0' 't-coffee_13.45.0.4846264+really13.41.0.28bdc39+dfsg-1+b1_arm64.deb' | sha256sum --check --strict -

A match establishes equality with the repository metadata value. It does not establish safety or catalog-side artifact retrieval.

Field source: Debian 13 (Trixie) main arm64 revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908

13.45.0.4846264+really13.41.0.28bdc39+dfsg-1 / amd64Observed Sep 1, 2026 to Sep 1, 2026

Verification status: Metadata observed; artifact bytes were not independently fetched or hashed by this catalog import. The digest below is source-reported.

Source-reported sha256: a9f4c84d7548b40576cd2cc07d1b0ac7990184728965fd33d7dac2014730f514

After downloading that exact artifact, compare its bytes with the source-reported expected digest:

printf '%s %s\n' 'a9f4c84d7548b40576cd2cc07d1b0ac7990184728965fd33d7dac2014730f514' 't-coffee_13.45.0.4846264+really13.41.0.28bdc39+dfsg-1_amd64.deb' | sha256sum --check --strict -

A match establishes equality with the repository metadata value. It does not establish safety or catalog-side artifact retrieval.

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3

Повнота запису каталогу

The completeness score measures metadata coverage, not software quality, security, compatibility, or suitability.

Summary and description
25/25
Artifact path and source digest
25/25
Dependency metadata
15/15
Package-file index
15/15
Homepage
5/5
License text
0/5
Source package or maintainer
10/10

Recorded total: 95/100

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3, Debian 13 (Trixie) main arm64 revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908. The cross-OS mapping is catalog-derived from the source-reported homepage; it does not establish authorship or publisher identity

Джерела та походження

Field-source links above resolve here. Each source entry names the metadata publisher, trust tier, exact snapshot revision, signature result, and observation time; catalog-derived mappings are labeled separately.

  • Debian 13 (Trixie) main amd64Sep 1, 2026

    Authoritative source; repository metadata signature verified, revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3

    Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.

    Repository-signature verification record
    Signed-object SHA-256
    98b25b5cd185c59d34aa6e4c3e9b5b8f01bbe9d104fe2dcfbcd30dc0a14a59ed
    Signer fingerprint
    4CB50190207B4758A3F73A796ED0E7B82643E131
    Keyring revision
    debian-archive-keyring.gpg
    SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
    Tool and policy
    gpgv (GnuPG) 2.4.9
    openfactory-software-catalog-signature-v1
    Verification time
    Sep 1, 2026
    Signed Release → package-index hash linkage

    Path: main/binary-amd64/Packages.xz
    Expected SHA-256: 3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
    Observed SHA-256: 3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
    Result: match verified

  • Debian 13 (Trixie) main arm64Sep 1, 2026

    Authoritative source; repository metadata signature verified, revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908

    Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.

    Repository-signature verification record
    Signed-object SHA-256
    98b25b5cd185c59d34aa6e4c3e9b5b8f01bbe9d104fe2dcfbcd30dc0a14a59ed
    Signer fingerprint
    4CB50190207B4758A3F73A796ED0E7B82643E131
    Keyring revision
    debian-archive-keyring.gpg
    SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
    Tool and policy
    gpgv (GnuPG) 2.4.9
    openfactory-software-catalog-signature-v1
    Verification time
    Sep 1, 2026
    Signed Release → package-index hash linkage

    Path: main/binary-arm64/Packages.xz
    Expected SHA-256: 753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908
    Observed SHA-256: 753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908
    Result: match verified

t-coffee Package for Debian 13 (Trixie) | OpenFactory