Debian 12 (Bookworm) native package

emboss

European molecular biology open software suite

Packages / Debian 12 (Bookworm) / science / emboss

Package: emboss (6.6.0+dfsg-12)

Maintainers:

Debian Med Packaging Team

External Resources:

Homepage: [emboss.sourceforge.net]

European molecular biology open software suite

Other Packages Related to emboss:

dep: [emboss-lib] (= 6.6.0+dfsg-12)
EMBOSS Libraries
dep: [libc6] (>= 2.34)
GNU C Library: Shared libraries
dep: [libexpat1] (>= 2.0.1)
XML parsing C library - runtime library
dep: [libx11-6]
X11 client-side library
dep: [zlib1g] (>= 1:1.1.4)
compression library - runtime
dep: [emboss-data] (= 6.6.0+dfsg-12)
data files for the EMBOSS package

rec: [primer3]
tool to design flanking oligo nucleotides for DNA amplification
rec: [dialign]
Segment-based multiple sequence alignment

sug: [emboss-doc]
documentation for EMBOSS
sug: [emboss-test]
test files for the EMBOSS package
sug: embassy
Package not available
sug: [clustalw]
global multiple nucleotide or peptide sequence alignment

Download emboss

Architecture	Package Size	Installed Size	Files
amd64	1.0 MiB	5.9 MiB	[list of files]
arm64	1000 KiB	18 MiB	[list of files]

Rutas de archivos del paquete (852)

Showing the first 250 sorted package-associated paths. Use file search to locate a specific path.

/usr/bin/aaindexextract
/usr/bin/abiview
/usr/bin/acdc
/usr/bin/acdgalaxy
/usr/bin/acdlog
/usr/bin/acdpretty
/usr/bin/acdtable
/usr/bin/acdtrace
/usr/bin/acdvalid
/usr/bin/aligncopy
/usr/bin/aligncopypair
/usr/bin/antigenic
/usr/bin/assemblyget
/usr/bin/backtranambig
/usr/bin/backtranseq
/usr/bin/banana
/usr/bin/biosed
/usr/bin/btwisted
/usr/bin/cachedas
/usr/bin/cachedbfetch
/usr/bin/cacheebeyesearch
/usr/bin/cacheensembl
/usr/bin/cai
/usr/bin/chaos
/usr/bin/charge
/usr/bin/checktrans
/usr/bin/chips
/usr/bin/cirdna
/usr/bin/codcmp
/usr/bin/codcopy
/usr/bin/coderet
/usr/bin/compseq
/usr/bin/consambig
/usr/bin/cpgplot
/usr/bin/cpgreport
/usr/bin/cusp
/usr/bin/cutgextract
/usr/bin/cutseq
/usr/bin/dan
/usr/bin/dbiblast
/usr/bin/dbifasta
/usr/bin/dbiflat
/usr/bin/dbigcg
/usr/bin/dbtell
/usr/bin/dbxcompress
/usr/bin/dbxedam
/usr/bin/dbxfasta
/usr/bin/dbxflat
/usr/bin/dbxgcg
/usr/bin/dbxobo
/usr/bin/dbxreport
/usr/bin/dbxresource
/usr/bin/dbxstat
/usr/bin/dbxtax
/usr/bin/dbxuncompress
/usr/bin/degapseq
/usr/bin/density
/usr/bin/descseq
/usr/bin/diffseq
/usr/bin/distmat
/usr/bin/dotmatcher
/usr/bin/dotpath
/usr/bin/dottup
/usr/bin/dreg
/usr/bin/drfinddata
/usr/bin/drfindformat
/usr/bin/drfindid
/usr/bin/drfindresource
/usr/bin/drget
/usr/bin/drtext
/usr/bin/edamdef
/usr/bin/edamhasinput
/usr/bin/edamhasoutput
/usr/bin/edamisformat
/usr/bin/edamisid
/usr/bin/edamname
/usr/bin/edialign
/usr/bin/einverted
/usr/bin/embossdata
/usr/bin/embossupdate
/usr/bin/embossversion
/usr/bin/em_cons
/usr/bin/emma
/usr/bin/emowse
/usr/bin/em_pscan
/usr/bin/entret
/usr/bin/epestfind
/usr/bin/eprimer3
/usr/bin/eprimer32
/usr/bin/equicktandem
/usr/bin/est2genome
/usr/bin/etandem
/usr/bin/extractalign
/usr/bin/extractfeat
/usr/bin/extractseq
/usr/bin/featcopy
/usr/bin/featmerge
/usr/bin/featreport
/usr/bin/feattext
/usr/bin/findkm
/usr/bin/freak
/usr/bin/fuzznuc
/usr/bin/fuzzpro
/usr/bin/fuzztran
/usr/bin/garnier
/usr/bin/geecee
/usr/bin/getorf
/usr/bin/godef
/usr/bin/goname
/usr/bin/helixturnhelix
/usr/bin/hmoment
/usr/bin/iep
/usr/bin/infoalign
/usr/bin/infoassembly
/usr/bin/infobase
/usr/bin/inforesidue
/usr/bin/infoseq
/usr/bin/isochore
/usr/bin/jaspextract
/usr/bin/jaspscan
/usr/bin/jembossctl
/usr/bin/lindna
/usr/bin/listor
/usr/bin/makenucseq
/usr/bin/makeprotseq
/usr/bin/marscan
/usr/bin/maskambignuc
/usr/bin/maskambigprot
/usr/bin/maskfeat
/usr/bin/maskseq
/usr/bin/matcher
/usr/bin/megamerger
/usr/bin/merger
/usr/bin/msbar
/usr/bin/mwcontam
/usr/bin/mwfilter
/usr/bin/needle
/usr/bin/needleall
/usr/bin/newcpgreport
/usr/bin/newcpgseek
/usr/bin/newseq
/usr/bin/nohtml
/usr/bin/noreturn
/usr/bin/nospace
/usr/bin/notab
/usr/bin/notseq
/usr/bin/nthseq
/usr/bin/nthseqset
/usr/bin/octanol
/usr/bin/oddcomp
/usr/bin/ontocount
/usr/bin/ontoget
/usr/bin/ontogetcommon
/usr/bin/ontogetdown
/usr/bin/ontogetobsolete
/usr/bin/ontogetroot
/usr/bin/ontogetsibs
/usr/bin/ontogetup
/usr/bin/ontoisobsolete
/usr/bin/ontotext
/usr/bin/palindrome
/usr/bin/pasteseq
/usr/bin/patmatdb
/usr/bin/patmatmotifs
/usr/bin/pepcoil
/usr/bin/pepdigest
/usr/bin/pepinfo
/usr/bin/pepnet
/usr/bin/pepstats
/usr/bin/pepwheel
/usr/bin/pepwindow
/usr/bin/pepwindowall
/usr/bin/plotcon
/usr/bin/plotorf
/usr/bin/polydot
/usr/bin/preg
/usr/bin/prettyplot
/usr/bin/prettyseq
/usr/bin/primersearch
/usr/bin/printsextract
/usr/bin/profit
/usr/bin/prophecy
/usr/bin/prophet
/usr/bin/prosextract
/usr/bin/psiphi
/usr/bin/rebaseextract
/usr/bin/recoder
/usr/bin/redata
/usr/bin/refseqget
/usr/bin/remap
/usr/bin/restover
/usr/bin/restrict
/usr/bin/revseq
/usr/bin/seealso
/usr/bin/seqcount
/usr/bin/seqmatchall
/usr/bin/seqret
/usr/bin/seqretsetall
/usr/bin/seqretsplit
/usr/bin/seqxref
/usr/bin/seqxrefget
/usr/bin/servertell
/usr/bin/showalign
/usr/bin/showdb
/usr/bin/showfeat
/usr/bin/showorf
/usr/bin/showpep
/usr/bin/showseq
/usr/bin/showserver
/usr/bin/shuffleseq
/usr/bin/sigcleave
/usr/bin/silent
/usr/bin/sirna
/usr/bin/sixpack
/usr/bin/sizeseq
/usr/bin/skipredundant
/usr/bin/skipseq
/usr/bin/splitsource
/usr/bin/splitter
/usr/bin/stretcher
/usr/bin/stssearch
/usr/bin/supermatcher
/usr/bin/syco
/usr/bin/taxget
/usr/bin/taxgetdown
/usr/bin/taxgetrank
/usr/bin/taxgetspecies
/usr/bin/taxgetup
/usr/bin/tcode
/usr/bin/textget
/usr/bin/textsearch
/usr/bin/tfextract
/usr/bin/tfm
/usr/bin/tfscan
/usr/bin/tmap
/usr/bin/tranalign
/usr/bin/transeq
/usr/bin/trimest
/usr/bin/trimseq
/usr/bin/trimspace
/usr/bin/twofeat
/usr/bin/union
/usr/bin/urlget
/usr/bin/variationget
/usr/bin/vectorstrip
/usr/bin/water
/usr/bin/whichdb
/usr/bin/wobble
/usr/bin/wordcount
/usr/bin/wordfinder

Field source: Debian 12 (Bookworm) main amd64 revision bookworm-main-amd64:9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5

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Versiones, suites y repositorios

Cada fila es metadato del índice de paquetes para una versión, arquitectura, suite y repositorio. Nombres, URL y tamaños vienen de la fuente; un enlace es un punto de descarga que puede cambiar, no una redistribución de OpenFactory.

Version	Release	Architecture	Repository	Package size	Installed size	Publisher repository artifact
6.6.0+dfsg-12	bookworm / main	amd64	Debian 12 · main · amd64	1.0 MiB	5.9 MiB	pool/main/e/emboss/emboss_6.6.0+dfsg-12_amd64.deb
6.6.0+dfsg-12	bookworm / main	arm64	Debian 12 · main · arm64	1000 KiB	18 MiB	pool/main/e/emboss/emboss_6.6.0+dfsg-12_arm64.deb

Field source: Debian 12 (Bookworm) main amd64 revision bookworm-main-amd64:9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5

Sumas de comprobación y fechas de observación

For an APT source, signature verification authenticates the repository metadata chain and the Packages index containing this source-reported artifact digest. It does not certify package safety.

6.6.0+dfsg-12 / amd64Observed Sep 1, 2026 to Sep 1, 2026

Verification status: Metadata observed; artifact bytes were not independently fetched or hashed by this catalog import. The digest below is source-reported.

Source-reported sha256: 31ca0f5334cd6b95169e14b2b5ead2ad03da8f3d5c272d1a9930dd14144551e3

After downloading that exact artifact, compare its bytes with the source-reported expected digest:

printf '%s  %s\n' '31ca0f5334cd6b95169e14b2b5ead2ad03da8f3d5c272d1a9930dd14144551e3' 'emboss_6.6.0+dfsg-12_amd64.deb' | sha256sum --check --strict -

A match establishes equality with the repository metadata value. It does not establish safety or catalog-side artifact retrieval.

Field source: Debian 12 (Bookworm) main amd64 revision bookworm-main-amd64:9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5

6.6.0+dfsg-12 / arm64Observed Sep 1, 2026 to Sep 1, 2026

Verification status: Metadata observed; artifact bytes were not independently fetched or hashed by this catalog import. The digest below is source-reported.

Source-reported sha256: 5d4e3888575c8f7382effc72a5db8c0bdbe0962b6845d46381b64357717728a7

After downloading that exact artifact, compare its bytes with the source-reported expected digest:

printf '%s  %s\n' '5d4e3888575c8f7382effc72a5db8c0bdbe0962b6845d46381b64357717728a7' 'emboss_6.6.0+dfsg-12_arm64.deb' | sha256sum --check --strict -

A match establishes equality with the repository metadata value. It does not establish safety or catalog-side artifact retrieval.

Field source: Debian 12 (Bookworm) main arm64 revision bookworm-main-arm64:2ddb1737692e8c45c53e8d57c0ce4cd21c78c5703b830c3226b1423566a06c00

Completitud del registro

The completeness score measures metadata coverage, not software quality, security, compatibility, or suitability.

Summary and description: 25/25
Artifact path and source digest: 25/25
Dependency metadata: 15/15
Package-file index: 15/15
Homepage: 5/5
License text: 0/5
Source package or maintainer: 10/10

Recorded total: 95/100

Field source: Debian 12 (Bookworm) main amd64 revision bookworm-main-amd64:9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5, Debian 12 (Bookworm) main arm64 revision bookworm-main-arm64:2ddb1737692e8c45c53e8d57c0ce4cd21c78c5703b830c3226b1423566a06c00. The cross-OS mapping is catalog-derived from the source-reported homepage; it does not establish authorship or publisher identity

Fuentes y procedencia

Field-source links above resolve here. Each source entry names the metadata publisher, trust tier, exact snapshot revision, signature result, and observation time; catalog-derived mappings are labeled separately.

Debian 12 (Bookworm) main amd64Sep 1, 2026
Authoritative source; repository metadata signature verified, revision bookworm-main-amd64:9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5
Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.
Repository-signature verification record
Signed object
https://deb.debian.org/debian/dists/bookworm/InRelease
Signed-object SHA-256
77737fa4b34f2693e982cc9ee35736816c35a7778fc2d326cc1bbf5b301fe1aa
Signer fingerprint
4CB50190207B4758A3F73A796ED0E7B82643E131
Keyring revision
debian-archive-keyring.gpg
SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
Tool and policy
gpgv (GnuPG) 2.4.9
openfactory-software-catalog-signature-v1
Verification time
Sep 1, 2026
Signed Release → package-index hash linkage
Path: main/binary-amd64/Packages.xz
Expected SHA-256: 9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5
Observed SHA-256: 9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5
Result: match verified
Debian 12 (Bookworm) main arm64Sep 1, 2026
Authoritative source; repository metadata signature verified, revision bookworm-main-arm64:2ddb1737692e8c45c53e8d57c0ce4cd21c78c5703b830c3226b1423566a06c00
Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.
Repository-signature verification record
Signed object
https://deb.debian.org/debian/dists/bookworm/InRelease
Signed-object SHA-256
77737fa4b34f2693e982cc9ee35736816c35a7778fc2d326cc1bbf5b301fe1aa
Signer fingerprint
4CB50190207B4758A3F73A796ED0E7B82643E131
Keyring revision
debian-archive-keyring.gpg
SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
Tool and policy
gpgv (GnuPG) 2.4.9
openfactory-software-catalog-signature-v1
Verification time
Sep 1, 2026
Signed Release → package-index hash linkage
Path: main/binary-arm64/Packages.xz
Expected SHA-256: 2ddb1737692e8c45c53e8d57c0ce4cd21c78c5703b830c3226b1423566a06c00
Observed SHA-256: 2ddb1737692e8c45c53e8d57c0ce4cd21c78c5703b830c3226b1423566a06c00
Result: match verified