Packages / Debian 13 (Trixie) / science / augur
Package: augur (24.4.0-1)
Maintainers:
External Resources:
Homepage: [github.com]
pipeline components for real-time virus analysis
Other Packages Related to augur:
dep: [python3-bcbio-gff]
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dep: [python3-biopython]
Python3 library for bioinformatics
dep: [python3-cvxopt]
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Read resources from Python packages
dep: python3-supported-min (>= 3.11)
Package not available
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An(other) implementation of JSON Schema
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dep: [python3-packaging]
core utilities for python3 packages
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data structures for "relational" or "labeled" data
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dep: [python3-scipy]
scientific tools for Python 3
dep: [python3-treetime] (>= 0.9.4)
inference of time stamped phylogenies and ancestral reconstruction (Python 3)
dep: [python3-xopen] (>= 1.7.0-1~)
Python3 module to open compressed files transparently
dep: [python3] [any]
interactive high-level object-oriented language (default python3 version)
dep: [python3-boto3]
Python interface to Amazon's Web Services - Python 3.x
dep: [python3-dendropy]
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dep: [python3-matplotlib]
Python based plotting system in a style similar to Matlab
dep: [python3-schedule]
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dep: [python3-seaborn]
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dep: [python3-zstandard]
Python bindings for interfacing with Zstandard library
dep: [seqmagick]
imagemagick-like frontend to Biopython SeqIO
dep: [python3-ipdb]
IPython-based pdb replacement (Python 3 version)
dep: [mafft]
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dep: [raxml]
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dep: [fasttree]
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dep: [vcftools]
Collection of tools to work with VCF files
rec: [iqtree]
efficient phylogenetic software by maximum likelihood
Download augur
| Architecture | Package Size | Installed Size | Files |
|---|---|---|---|
| all | 255 KiB | 1.0 MiB | [list of files] |
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Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
