Debian 13 (Trixie) native package

ivar

functions broadly useful for viral amplicon-based sequencing

Packages / Debian 13 (Trixie) / science / ivar

Package: ivar (1.4.4+dfsg-1)

Maintainers:

Debian Med Packaging Team

External Resources:

Homepage: [github.com]

functions broadly useful for viral amplicon-based sequencing

Other Packages Related to ivar:

dep: [libc6] (>= 2.38)
GNU C Library: Shared libraries
dep: [libgcc-s1] (>= 3.0)
GCC support library
dep: [libhts3t64] (>= 1.17)
C library for high-throughput sequencing data formats
dep: [libstdc++6] (>= 13.1)
GNU Standard C++ Library v3

rec: [samtools]
processing sequence alignments in SAM, BAM and CRAM formats

Download ivar

Architecture	Package Size	Installed Size	Files
amd64	225 KiB	1.5 MiB	[list of files]
arm64	206 KiB	1.5 MiB	[list of files]

Rutas de archivos del paquete (63)

Paths come from the repository package-file index for the observed builds. They describe archive/package associations, not every file that will exist on a running system after maintainer scripts, alternatives, generated state, diversions, or installation choices.

/usr/bin/ivar
/usr/share/doc/ivar/changelog.Debian.gz
/usr/share/doc/ivar/COOKBOOK.md
/usr/share/doc/ivar/copyright
/usr/share/doc/ivar/examples/data/db/test_ref.fa
/usr/share/doc/ivar/examples/data/db/test_ref.fa.fai
/usr/share/doc/ivar/examples/data/pair_info_2.tsv
/usr/share/doc/ivar/examples/data/pair_information.tsv
/usr/share/doc/ivar/examples/data/primer_only/primer_edge_cases.bam
/usr/share/doc/ivar/examples/data/primer_only/primer_edge_cases.bam.bai
/usr/share/doc/ivar/examples/data/primer_pair_test/test_primer_pair.bed
/usr/share/doc/ivar/examples/data/primer_pair_test/test_primer_pair_trim.tsv
/usr/share/doc/ivar/examples/data/primer_pair_test/test_primer_pair_trim.untrimmed.bam
/usr/share/doc/ivar/examples/data/test_amplicon.sorted.bam
/usr/share/doc/ivar/examples/data/test.bed
/usr/share/doc/ivar/examples/data/test.filtered.tsv
/usr/share/doc/ivar/examples/data/test.gap.fa
/usr/share/doc/ivar/examples/data/test.gap.qual.txt
/usr/share/doc/ivar/examples/data/test.gap.sorted.bam
/usr/share/doc/ivar/examples/data/test.gap.sorted.bam.bai
/usr/share/doc/ivar/examples/data/test.gap.sorted.mpileup
/usr/share/doc/ivar/examples/data/test.gff
/usr/share/doc/ivar/examples/data/test.indel2.tsv
/usr/share/doc/ivar/examples/data/test.indel3.tsv
/usr/share/doc/ivar/examples/data/test.indel4.tsv
/usr/share/doc/ivar/examples/data/test.indel.mpileup
/usr/share/doc/ivar/examples/data/test.indel.tsv
/usr/share/doc/ivar/examples/data/test_isize.bed
/usr/share/doc/ivar/examples/data/test_isize.sorted.bam
/usr/share/doc/ivar/examples/data/test.masked_primer_indices.txt
/usr/share/doc/ivar/examples/data/test_merged.bed
/usr/share/doc/ivar/examples/data/test.sim.merged.sorted.bam
/usr/share/doc/ivar/examples/data/test.sim.merged.sorted.bam.bai
/usr/share/doc/ivar/examples/data/test.sorted.bam
/usr/share/doc/ivar/examples/data/test.sorted.bam.bai
/usr/share/doc/ivar/examples/data/test_strand.gff
/usr/share/doc/ivar/examples/data/test.strand.pileup
/usr/share/doc/ivar/examples/data/test_strand.tsv
/usr/share/doc/ivar/examples/data/test.trimmed.masked.bam
/usr/share/doc/ivar/examples/data/test.trimmed.masked.bam.bai
/usr/share/doc/ivar/examples/data/test.trimmed.sorted.bam
/usr/share/doc/ivar/examples/data/test.trimmed.sorted.bam.bai
/usr/share/doc/ivar/examples/data/test.unmapped.sorted.bam
/usr/share/doc/ivar/examples/data/test.unmapped.sorted.bam.bai
/usr/share/doc/ivar/examples/data/test_unpaired.sorted.bam
/usr/share/doc/ivar/examples/data/test_unpaired.sorted.bam.bai
/usr/share/doc/ivar/examples/data/trim_isize.bam
/usr/share/doc/ivar/examples/ref/out-consensus.fa
/usr/share/doc/ivar/examples/ref/out-consensus.qual.txt
/usr/share/doc/ivar/examples/ref/out-filtered.tsv
/usr/share/doc/ivar/examples/ref/out-getmasked.txt
/usr/share/doc/ivar/examples/ref/out-removereads.sam
/usr/share/doc/ivar/examples/ref/out-trim2.sam
/usr/share/doc/ivar/examples/ref/out-trim.sam
/usr/share/doc/ivar/examples/ref/out-variants.tsv
/usr/share/doc/ivar/examples/ref/README.test_data
/usr/share/doc/ivar/MANUAL.md.gz
/usr/share/doc/ivar/README
/usr/share/doc/ivar/README.md.gz
/usr/share/doc/ivar/README.test
/usr/share/doc/ivar/README.test_data
/usr/share/doc/ivar/run-unit-test
/usr/share/man/man1/ivar.1.gz

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3

Usar este paquete

OpenFactory puede arrancar este sistema operativo en una máquina virtual del navegador, o iniciar una construcción que incluye el nombre nativo del paquete de este registro.

Probar Debian 13 (Trixie) en el navegador Construir una imagen que incluye ivar

Versiones, suites y repositorios

Cada fila es metadato del índice de paquetes para una versión, arquitectura, suite y repositorio. Nombres, URL y tamaños vienen de la fuente; un enlace es un punto de descarga que puede cambiar, no una redistribución de OpenFactory.

Version	Release	Architecture	Repository	Package size	Installed size	Publisher repository artifact
1.4.4+dfsg-1	trixie / main	amd64	Debian 13 · main · amd64	225 KiB	1.5 MiB	pool/main/i/ivar/ivar_1.4.4+dfsg-1_amd64.deb
1.4.4+dfsg-1	trixie / main	arm64	Debian 13 · main · arm64	206 KiB	1.5 MiB	pool/main/i/ivar/ivar_1.4.4+dfsg-1_arm64.deb

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3

Sumas de comprobación y fechas de observación

For an APT source, signature verification authenticates the repository metadata chain and the Packages index containing this source-reported artifact digest. It does not certify package safety.

1.4.4+dfsg-1 / amd64Observed Sep 1, 2026 to Sep 1, 2026

Verification status: Metadata observed; artifact bytes were not independently fetched or hashed by this catalog import. The digest below is source-reported.

Source-reported sha256: 939064dffa50eb471d4e4863678ade463d3ac61b7a873d8965dc0348885f661d

After downloading that exact artifact, compare its bytes with the source-reported expected digest:

printf '%s  %s\n' '939064dffa50eb471d4e4863678ade463d3ac61b7a873d8965dc0348885f661d' 'ivar_1.4.4+dfsg-1_amd64.deb' | sha256sum --check --strict -

A match establishes equality with the repository metadata value. It does not establish safety or catalog-side artifact retrieval.

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3

1.4.4+dfsg-1 / arm64Observed Sep 1, 2026 to Sep 1, 2026

Verification status: Metadata observed; artifact bytes were not independently fetched or hashed by this catalog import. The digest below is source-reported.

Source-reported sha256: 1eee1f3eccba4bb4b4d320ec5c6078a66ecc4906602afa3c2be16c839fef76f5

After downloading that exact artifact, compare its bytes with the source-reported expected digest:

printf '%s  %s\n' '1eee1f3eccba4bb4b4d320ec5c6078a66ecc4906602afa3c2be16c839fef76f5' 'ivar_1.4.4+dfsg-1_arm64.deb' | sha256sum --check --strict -

A match establishes equality with the repository metadata value. It does not establish safety or catalog-side artifact retrieval.

Field source: Debian 13 (Trixie) main arm64 revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908

Completitud del registro

The completeness score measures metadata coverage, not software quality, security, compatibility, or suitability.

Summary and description: 25/25
Artifact path and source digest: 25/25
Dependency metadata: 15/15
Package-file index: 15/15
Homepage: 5/5
License text: 0/5
Source package or maintainer: 10/10

Recorded total: 95/100

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3, Debian 13 (Trixie) main arm64 revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908. The cross-OS mapping is catalog-derived from the source-reported homepage; it does not establish authorship or publisher identity

Fuentes y procedencia

Field-source links above resolve here. Each source entry names the metadata publisher, trust tier, exact snapshot revision, signature result, and observation time; catalog-derived mappings are labeled separately.

Debian 13 (Trixie) main amd64Sep 1, 2026
Authoritative source; repository metadata signature verified, revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.
Repository-signature verification record
Signed object
https://deb.debian.org/debian/dists/trixie/InRelease
Signed-object SHA-256
98b25b5cd185c59d34aa6e4c3e9b5b8f01bbe9d104fe2dcfbcd30dc0a14a59ed
Signer fingerprint
4CB50190207B4758A3F73A796ED0E7B82643E131
Keyring revision
debian-archive-keyring.gpg
SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
Tool and policy
gpgv (GnuPG) 2.4.9
openfactory-software-catalog-signature-v1
Verification time
Sep 1, 2026
Signed Release → package-index hash linkage
Path: main/binary-amd64/Packages.xz
Expected SHA-256: 3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
Observed SHA-256: 3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
Result: match verified
Debian 13 (Trixie) main arm64Sep 1, 2026
Authoritative source; repository metadata signature verified, revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908
Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.
Repository-signature verification record
Signed object
https://deb.debian.org/debian/dists/trixie/InRelease
Signed-object SHA-256
98b25b5cd185c59d34aa6e4c3e9b5b8f01bbe9d104fe2dcfbcd30dc0a14a59ed
Signer fingerprint
4CB50190207B4758A3F73A796ED0E7B82643E131
Keyring revision
debian-archive-keyring.gpg
SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
Tool and policy
gpgv (GnuPG) 2.4.9
openfactory-software-catalog-signature-v1
Verification time
Sep 1, 2026
Signed Release → package-index hash linkage
Path: main/binary-arm64/Packages.xz
Expected SHA-256: 753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908
Observed SHA-256: 753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908
Result: match verified