Linux workstation

Debian 13 (Trixie) native package

jellyfish

count k-mers in DNA sequences

Packages / Debian 13 (Trixie) / science / jellyfish

[Source: jellyfish]

Package: jellyfish (2.3.1-4+b1)

Maintainers:

Debian Med Packaging Team

External Resources:

Homepage: [www.genome.umd.edu]

Similar packages:

count k-mers in DNA sequences

Other Packages Related to jellyfish:

  • dep: [libc6] (>= 2.38)

    GNU C Library: Shared libraries

  • dep: [libgcc-s1] (>= 3.0)

    GCC support library

  • dep: [libhts3t64] (>= 1.17)

    C library for high-throughput sequencing data formats

  • dep: [libjellyfish-2.0-2] (= 2.3.1-4+b1)

    count k-mers in DNA sequences (dynamic library of jellyfish)

  • dep: [libstdc++6] (>= 14)

    GNU Standard C++ Library v3

Download jellyfish

ArchitecturePackage SizeInstalled SizeFiles
amd64789 KiB2.5 MiB[list of files]
arm64709 KiB2.5 MiB[list of files]

Rutas de archivos del paquete (15)

Paths come from the repository package-file index for the observed builds. They describe archive/package associations, not every file that will exist on a running system after maintainer scripts, alternatives, generated state, diversions, or installation choices.

  • /usr/bin/jellyfish
  • /usr/lib/jellyfish/bin/fastq2sam
  • /usr/lib/jellyfish/bin/generate_sequence
  • /usr/lib/jellyfish/bin/test_all
  • /usr/share/doc-base/jellyfish.jellyfish
  • /usr/share/doc/jellyfish/changelog.Debian.amd64.gz
  • /usr/share/doc/jellyfish/changelog.Debian.arm64.gz
  • /usr/share/doc/jellyfish/changelog.Debian.gz
  • /usr/share/doc/jellyfish/changelog.gz
  • /usr/share/doc/jellyfish/copyright
  • /usr/share/doc/jellyfish/jellyfish.pdf.gz
  • /usr/share/doc/jellyfish/README.test
  • /usr/share/doc/jellyfish/run-unit-test
  • /usr/share/lintian/overrides/jellyfish
  • /usr/share/man/man1/jellyfish.1.gz

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3

Usar este paquete

OpenFactory puede arrancar este sistema operativo en una máquina virtual del navegador, o iniciar una construcción que incluye el nombre nativo del paquete de este registro.

Probar Debian 13 (Trixie) en el navegadorConstruir una imagen que incluye jellyfish

Versiones, suites y repositorios

Cada fila es metadato del índice de paquetes para una versión, arquitectura, suite y repositorio. Nombres, URL y tamaños vienen de la fuente; un enlace es un punto de descarga que puede cambiar, no una redistribución de OpenFactory.

VersionReleaseArchitectureRepositoryPackage sizeInstalled sizePublisher repository artifact
2.3.1-4+b1trixie / mainamd64Debian 13 · main · amd64789 KiB2.5 MiBpool/main/j/jellyfish/jellyfish_2.3.1-4+b1_amd64.deb
2.3.1-4+b1trixie / mainarm64Debian 13 · main · arm64709 KiB2.5 MiBpool/main/j/jellyfish/jellyfish_2.3.1-4+b1_arm64.deb

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3

Sumas de comprobación y fechas de observación

For an APT source, signature verification authenticates the repository metadata chain and the Packages index containing this source-reported artifact digest. It does not certify package safety.

2.3.1-4+b1 / amd64Observed Sep 1, 2026 to Sep 1, 2026

Verification status: Metadata observed; artifact bytes were not independently fetched or hashed by this catalog import. The digest below is source-reported.

Source-reported sha256: c31ee07c0a3701ea7497a3a29c31027fed0bf364a995c36bb531894b97b6dff8

After downloading that exact artifact, compare its bytes with the source-reported expected digest:

printf '%s %s\n' 'c31ee07c0a3701ea7497a3a29c31027fed0bf364a995c36bb531894b97b6dff8' 'jellyfish_2.3.1-4+b1_amd64.deb' | sha256sum --check --strict -

A match establishes equality with the repository metadata value. It does not establish safety or catalog-side artifact retrieval.

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3

2.3.1-4+b1 / arm64Observed Sep 1, 2026 to Sep 1, 2026

Verification status: Metadata observed; artifact bytes were not independently fetched or hashed by this catalog import. The digest below is source-reported.

Source-reported sha256: 267e606659655977b7c24c919fdad5878fac6d36d677736101dfc1c4e072fa25

After downloading that exact artifact, compare its bytes with the source-reported expected digest:

printf '%s %s\n' '267e606659655977b7c24c919fdad5878fac6d36d677736101dfc1c4e072fa25' 'jellyfish_2.3.1-4+b1_arm64.deb' | sha256sum --check --strict -

A match establishes equality with the repository metadata value. It does not establish safety or catalog-side artifact retrieval.

Field source: Debian 13 (Trixie) main arm64 revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908

Completitud del registro

The completeness score measures metadata coverage, not software quality, security, compatibility, or suitability.

Summary and description
25/25
Artifact path and source digest
25/25
Dependency metadata
15/15
Package-file index
15/15
Homepage
5/5
License text
0/5
Source package or maintainer
10/10

Recorded total: 95/100

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3, Debian 13 (Trixie) main arm64 revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908. The cross-OS mapping is catalog-derived from the source-reported homepage; it does not establish authorship or publisher identity

Fuentes y procedencia

Field-source links above resolve here. Each source entry names the metadata publisher, trust tier, exact snapshot revision, signature result, and observation time; catalog-derived mappings are labeled separately.

  • Debian 13 (Trixie) main amd64Sep 1, 2026

    Authoritative source; repository metadata signature verified, revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3

    Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.

    Repository-signature verification record
    Signed-object SHA-256
    98b25b5cd185c59d34aa6e4c3e9b5b8f01bbe9d104fe2dcfbcd30dc0a14a59ed
    Signer fingerprint
    4CB50190207B4758A3F73A796ED0E7B82643E131
    Keyring revision
    debian-archive-keyring.gpg
    SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
    Tool and policy
    gpgv (GnuPG) 2.4.9
    openfactory-software-catalog-signature-v1
    Verification time
    Sep 1, 2026
    Signed Release → package-index hash linkage

    Path: main/binary-amd64/Packages.xz
    Expected SHA-256: 3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
    Observed SHA-256: 3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
    Result: match verified

  • Debian 13 (Trixie) main arm64Sep 1, 2026

    Authoritative source; repository metadata signature verified, revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908

    Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.

    Repository-signature verification record
    Signed-object SHA-256
    98b25b5cd185c59d34aa6e4c3e9b5b8f01bbe9d104fe2dcfbcd30dc0a14a59ed
    Signer fingerprint
    4CB50190207B4758A3F73A796ED0E7B82643E131
    Keyring revision
    debian-archive-keyring.gpg
    SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
    Tool and policy
    gpgv (GnuPG) 2.4.9
    openfactory-software-catalog-signature-v1
    Verification time
    Sep 1, 2026
    Signed Release → package-index hash linkage

    Path: main/binary-arm64/Packages.xz
    Expected SHA-256: 753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908
    Observed SHA-256: 753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908
    Result: match verified

jellyfish Package for Debian 13 (Trixie) | OpenFactory