Debian 13 (Trixie) native package

mcl

Markov Cluster algorithm

Packages / Debian 13 (Trixie) / math / mcl

Package: mcl (1:22-282+ds-4)

Maintainers:

Debian Med Packaging Team

External Resources:

Homepage: [micans.org]

Markov Cluster algorithm

Other Packages Related to mcl:

dep: [libc6] (>= 2.34)
GNU C Library: Shared libraries
dep: [libtingea0] (>= 21-361)
C utility library libtingea for MCL and zoem

sug: [mcl-doc]
documentation for mcl

enh: [bioperl-run]
BioPerl wrappers: scripts
enh: [ncbi-tools-bin]
NCBI libraries for biology applications (text-based utilities)

Download mcl

Architecture	Package Size	Installed Size	Files
amd64	466 KiB	2.3 MiB	[list of files]
arm64	442 KiB	2.6 MiB	[list of files]

Rutas de archivos del paquete (55)

Paths come from the repository package-file index for the observed builds. They describe archive/package associations, not every file that will exist on a running system after maintainer scripts, alternatives, generated state, diversions, or installation choices.

/usr/bin/clm
/usr/bin/clxdo
/usr/bin/mcl
/usr/bin/mcx
/usr/bin/mcxarray
/usr/bin/mcxdeblast
/usr/bin/mcxdump
/usr/bin/mcxi
/usr/bin/mcxload
/usr/bin/mcxmap
/usr/bin/mcxsubs
/usr/bin/rcl
/usr/bin/rcldo.pl
/usr/bin/rcl-dot-resmap.pl
/usr/bin/rcl-qc
/usr/bin/rcl-qm.R
/usr/bin/rcl-relevel.pl
/usr/bin/rcl-select.pl
/usr/share/doc/mcl/changelog.Debian.gz
/usr/share/doc/mcl/changelog.gz
/usr/share/doc/mcl/copyright
/usr/share/doc/mcl/README.Debian
/usr/share/doc/mcl/README.test
/usr/share/doc/mcl/scripts/clxdo.gz
/usr/share/doc/mcl/scripts/minimcl.gz
/usr/share/lintian/overrides/mcl
/usr/share/man/man1/clm.1.gz
/usr/share/man/man1/clmclose.1.gz
/usr/share/man/man1/clmdist.1.gz
/usr/share/man/man1/clmimac.1.gz
/usr/share/man/man1/clminfo.1.gz
/usr/share/man/man1/clminfo2.1.gz
/usr/share/man/man1/clmmate.1.gz
/usr/share/man/man1/clmmeet.1.gz
/usr/share/man/man1/clmoptics.1.gz
/usr/share/man/man1/clmorder.1.gz
/usr/share/man/man1/clmresidue.1.gz
/usr/share/man/man1/clmvol.1.gz
/usr/share/man/man1/mcl.1.gz
/usr/share/man/man1/mclcm.1.gz
/usr/share/man/man1/mcx.1.gz
/usr/share/man/man1/mcxalter.1.gz
/usr/share/man/man1/mcxarray.1.gz
/usr/share/man/man1/mcxclcf.1.gz
/usr/share/man/man1/mcxconvert.1.gz
/usr/share/man/man1/mcxctty.1.gz
/usr/share/man/man1/mcxdiameter.1.gz
/usr/share/man/man1/mcxdump.1.gz
/usr/share/man/man1/mcxerdos.1.gz
/usr/share/man/man1/mcxi.1.gz
/usr/share/man/man1/mcxload.1.gz
/usr/share/man/man1/mcxmap.1.gz
/usr/share/man/man1/mcxquery.1.gz
/usr/share/man/man1/mcxrand.1.gz
/usr/share/man/man1/mcxsubs.1.gz

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3

Usar este paquete

OpenFactory puede arrancar este sistema operativo en una máquina virtual del navegador, o iniciar una construcción que incluye el nombre nativo del paquete de este registro.

Probar Debian 13 (Trixie) en el navegador Construir una imagen que incluye mcl

Versiones, suites y repositorios

Cada fila es metadato del índice de paquetes para una versión, arquitectura, suite y repositorio. Nombres, URL y tamaños vienen de la fuente; un enlace es un punto de descarga que puede cambiar, no una redistribución de OpenFactory.

Version	Release	Architecture	Repository	Package size	Installed size	Publisher repository artifact
1:22-282+ds-4	trixie / main	amd64	Debian 13 · main · amd64	466 KiB	2.3 MiB	pool/main/m/mcl/mcl_22-282+ds-4_amd64.deb
1:22-282+ds-4	trixie / main	arm64	Debian 13 · main · arm64	442 KiB	2.6 MiB	pool/main/m/mcl/mcl_22-282+ds-4_arm64.deb

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3

Sumas de comprobación y fechas de observación

For an APT source, signature verification authenticates the repository metadata chain and the Packages index containing this source-reported artifact digest. It does not certify package safety.

1:22-282+ds-4 / amd64Observed Sep 1, 2026 to Sep 1, 2026

Verification status: Metadata observed; artifact bytes were not independently fetched or hashed by this catalog import. The digest below is source-reported.

Source-reported sha256: cb0c2d15115b35f69ec92fd1a38eadc724297f63418b3935c196998749e92eed

After downloading that exact artifact, compare its bytes with the source-reported expected digest:

printf '%s  %s\n' 'cb0c2d15115b35f69ec92fd1a38eadc724297f63418b3935c196998749e92eed' 'mcl_22-282+ds-4_amd64.deb' | sha256sum --check --strict -

A match establishes equality with the repository metadata value. It does not establish safety or catalog-side artifact retrieval.

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3

1:22-282+ds-4 / arm64Observed Sep 1, 2026 to Sep 1, 2026

Verification status: Metadata observed; artifact bytes were not independently fetched or hashed by this catalog import. The digest below is source-reported.

Source-reported sha256: 407d00093091e9fca6d7fb65b18f64a4f005ac91c3446daa1c3aec93af5876df

After downloading that exact artifact, compare its bytes with the source-reported expected digest:

printf '%s  %s\n' '407d00093091e9fca6d7fb65b18f64a4f005ac91c3446daa1c3aec93af5876df' 'mcl_22-282+ds-4_arm64.deb' | sha256sum --check --strict -

A match establishes equality with the repository metadata value. It does not establish safety or catalog-side artifact retrieval.

Field source: Debian 13 (Trixie) main arm64 revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908

Completitud del registro

The completeness score measures metadata coverage, not software quality, security, compatibility, or suitability.

Summary and description: 25/25
Artifact path and source digest: 25/25
Dependency metadata: 15/15
Package-file index: 15/15
Homepage: 5/5
License text: 0/5
Source package or maintainer: 10/10

Recorded total: 95/100

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3, Debian 13 (Trixie) main arm64 revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908. The cross-OS mapping is catalog-derived from the source-reported homepage; it does not establish authorship or publisher identity

Fuentes y procedencia

Field-source links above resolve here. Each source entry names the metadata publisher, trust tier, exact snapshot revision, signature result, and observation time; catalog-derived mappings are labeled separately.

Debian 13 (Trixie) main amd64Sep 1, 2026
Authoritative source; repository metadata signature verified, revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.
Repository-signature verification record
Signed object
https://deb.debian.org/debian/dists/trixie/InRelease
Signed-object SHA-256
98b25b5cd185c59d34aa6e4c3e9b5b8f01bbe9d104fe2dcfbcd30dc0a14a59ed
Signer fingerprint
4CB50190207B4758A3F73A796ED0E7B82643E131
Keyring revision
debian-archive-keyring.gpg
SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
Tool and policy
gpgv (GnuPG) 2.4.9
openfactory-software-catalog-signature-v1
Verification time
Sep 1, 2026
Signed Release → package-index hash linkage
Path: main/binary-amd64/Packages.xz
Expected SHA-256: 3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
Observed SHA-256: 3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
Result: match verified
Debian 13 (Trixie) main arm64Sep 1, 2026
Authoritative source; repository metadata signature verified, revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908
Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.
Repository-signature verification record
Signed object
https://deb.debian.org/debian/dists/trixie/InRelease
Signed-object SHA-256
98b25b5cd185c59d34aa6e4c3e9b5b8f01bbe9d104fe2dcfbcd30dc0a14a59ed
Signer fingerprint
4CB50190207B4758A3F73A796ED0E7B82643E131
Keyring revision
debian-archive-keyring.gpg
SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
Tool and policy
gpgv (GnuPG) 2.4.9
openfactory-software-catalog-signature-v1
Verification time
Sep 1, 2026
Signed Release → package-index hash linkage
Path: main/binary-arm64/Packages.xz
Expected SHA-256: 753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908
Observed SHA-256: 753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908
Result: match verified