Debian 12 (Bookworm) native package

crac

integrated RNA-Seq read analysis

Packages / Debian 12 (Bookworm) / science / crac

[Source: crac]

Package: crac (2.5.2+dfsg-5+b1)

Maintainers:

Debian Med Packaging Team

External Resources:

Homepage: [crac.gforge.inria.fr]

integrated RNA-Seq read analysis

Other Packages Related to crac:

dep: [libc6] (>= 2.34)
GNU C Library: Shared libraries
dep: [libgcc-s1] (>= 3.0)
GCC support library
dep: [libgkarrays1] (>= 2.1.0+dfsg)
library to query large collection of NGS sequences
dep: [libgzstream0] (>= 1.5+dfsg)
provide functionality of zlib C-library in a C++ iostream
dep: [libhts3] (>= 1.10)
C library for high-throughput sequencing data formats
dep: [libjellyfish-2.0-2] (>= 2.3.0)
count k-mers in DNA sequences (dynamic library of jellyfish)
dep: [libstdc++6] (>= 11)
GNU Standard C++ Library v3
dep: [zlib1g] (>= 1:1.1.4)
compression library - runtime

Download crac

Architecture	Package Size	Installed Size	Files
arm64	435 KiB	2.3 MiB	[list of files]

Package file paths (124)

Paths come from the repository package-file index for the observed builds. They describe archive/package associations, not every file that will exist on a running system after maintainer scripts, alternatives, generated state, diversions, or installation choices.

/usr/bin/crac
/usr/bin/crac-client
/usr/bin/crac-index
/usr/include/crac-2.5.2/kseq/kseq.h
/usr/share/doc/crac/changelog.Debian.amd64.gz
/usr/share/doc/crac/changelog.Debian.arm64.gz
/usr/share/doc/crac/changelog.Debian.gz
/usr/share/doc/crac/changelog.gz
/usr/share/doc/crac/copyright
/usr/share/doc/crac/examples/test_f/bug/bug-15605_2-genome.fa
/usr/share/doc/crac/examples/test_f/bug/bug-15605_2-read.fa
/usr/share/doc/crac/examples/test_f/bug/bug-15605_2.should_get
/usr/share/doc/crac/examples/test_f/bug/bug-15605-genome.fa
/usr/share/doc/crac/examples/test_f/bug/bug-15605-read.fa
/usr/share/doc/crac/examples/test_f/bug/bug-15605.should_get
/usr/share/doc/crac/examples/test_f/bug/bug-15630-genome.fa
/usr/share/doc/crac/examples/test_f/bug/bug-15630-read.fa
/usr/share/doc/crac/examples/test_f/bug/bug-15630.should_get
/usr/share/doc/crac/examples/test_f/bug/bug-15639-genome.fa
/usr/share/doc/crac/examples/test_f/bug/bug-15639-read.fa
/usr/share/doc/crac/examples/test_f/bug/bug-15639.should_get
/usr/share/doc/crac/examples/test_f/bug/bug-15646-genome.fa
/usr/share/doc/crac/examples/test_f/bug/bug-15646-read.fa
/usr/share/doc/crac/examples/test_f/bug/bug-15646.should_get
/usr/share/doc/crac/examples/test_f/bug/bug-15649-2.should_get
/usr/share/doc/crac/examples/test_f/bug/bug-15649-genome-2.fa
/usr/share/doc/crac/examples/test_f/bug/bug-15649-genome.fa
/usr/share/doc/crac/examples/test_f/bug/bug-15649-read.fa
/usr/share/doc/crac/examples/test_f/bug/bug-15649.should_get
/usr/share/doc/crac/examples/test_f/bug/bug-15672-genome.fa
/usr/share/doc/crac/examples/test_f/bug/bug-15672-read.fa
/usr/share/doc/crac/examples/test_f/bug/bug-15672.should_get
/usr/share/doc/crac/examples/test_f/bug/bug-15677-genome.fa
/usr/share/doc/crac/examples/test_f/bug/bug-15677-read.fa
/usr/share/doc/crac/examples/test_f/bug/bug-15677.should_get
/usr/share/doc/crac/examples/test_f/bug/bug-15847-genome.fa
/usr/share/doc/crac/examples/test_f/bug/bug-15847-read.fa
/usr/share/doc/crac/examples/test_f/bug/bug-15847.should_get
/usr/share/doc/crac/examples/test_f/bug/bug-16403-genome.fa
/usr/share/doc/crac/examples/test_f/bug/bug-16403-read.fa
/usr/share/doc/crac/examples/test_f/bug/bug-16403.should_get
/usr/share/doc/crac/examples/test_f/bug/bug-16502-genome.fa
/usr/share/doc/crac/examples/test_f/bug/bug-16502-read.fa
/usr/share/doc/crac/examples/test_f/bug/bug-16502.should_get
/usr/share/doc/crac/examples/test_f/bug/bug-16581-genome.fa
/usr/share/doc/crac/examples/test_f/bug/bug-16581-read.fq
/usr/share/doc/crac/examples/test_f/bug/bug-16581.should_get
/usr/share/doc/crac/examples/test_f/bug/bug-16931.should_get
/usr/share/doc/crac/examples/test_f/bug/bug-17175-2-genome.fa
/usr/share/doc/crac/examples/test_f/bug/bug-17175-2-reads.fa
/usr/share/doc/crac/examples/test_f/bug/bug-17175-genome.fa
/usr/share/doc/crac/examples/test_f/bug/bug-17175-read.fa
/usr/share/doc/crac/examples/test_f/bug/bug-17175.should_get
/usr/share/doc/crac/examples/test_f/bug/bug-17749-genome.fa
/usr/share/doc/crac/examples/test_f/bug/bug-17749-read.fa
/usr/share/doc/crac/examples/test_f/bug/bug-17749.should_get
/usr/share/doc/crac/examples/test_f/bug/bug-18180-genome.fa
/usr/share/doc/crac/examples/test_f/bug/bug-18180-read.fa
/usr/share/doc/crac/examples/test_f/bug/bug-18180.should_get
/usr/share/doc/crac/examples/test_f/bug/bug-18409-genome.fa
/usr/share/doc/crac/examples/test_f/bug/bug-18409-read.fa
/usr/share/doc/crac/examples/test_f/bug/bug-18409.should_get
/usr/share/doc/crac/examples/test_f/bug/bug-18435-genome.fa
/usr/share/doc/crac/examples/test_f/bug/bug-18435-read.fa
/usr/share/doc/crac/examples/test_f/bug/bug-18435.should_get
/usr/share/doc/crac/examples/test_f/bug/bug-18522-genome.fa
/usr/share/doc/crac/examples/test_f/bug/bug-18522-read.fa
/usr/share/doc/crac/examples/test_f/bug/bug-18522.should_get
/usr/share/doc/crac/examples/test_f/bug/bug-18524-genome.fa
/usr/share/doc/crac/examples/test_f/bug/bug-18524-read.fa
/usr/share/doc/crac/examples/test_f/bug/bug-18524.should_get
/usr/share/doc/crac/examples/test_f/bug/bug-18568-genome.fa
/usr/share/doc/crac/examples/test_f/bug/bug-18568-read.fa
/usr/share/doc/crac/examples/test_f/bug/bug-18568.should_get
/usr/share/doc/crac/examples/test_f/bug/bug-18793-genome.fa
/usr/share/doc/crac/examples/test_f/bug/bug-18793-read.fa
/usr/share/doc/crac/examples/test_f/bug/bug-18793.should_get
/usr/share/doc/crac/examples/test_f/bug/bug-2015-12-08-genome.fa
/usr/share/doc/crac/examples/test_f/bug/bug-2015-12-08-read1.fa
/usr/share/doc/crac/examples/test_f/bug/bug-2015-12-08-read2.fa
/usr/share/doc/crac/examples/test_f/bug/bug-2015-12-08.should_get
/usr/share/doc/crac/examples/test_f/bug/bug-case-sensitive-genome.fa
/usr/share/doc/crac/examples/test_f/bug/bug-case-sensitive-read.fa
/usr/share/doc/crac/examples/test_f/bug/bug-case-sensitive.should_get
/usr/share/doc/crac/examples/test_f/bug/test0.fa
/usr/share/doc/crac/examples/test_f/bug/test.fa
/usr/share/doc/crac/examples/test_f/bug/tmp-genome.fa
/usr/share/doc/crac/examples/test_f/bug/tmp-reads.fa
/usr/share/doc/crac/examples/test_f/causes/biotag.fa
/usr/share/doc/crac/examples/test_f/causes/biotag.fa.should_get
/usr/share/doc/crac/examples/test_f/causes/genome.fa
/usr/share/doc/crac/examples/test_f/causes/snp.fa
/usr/share/doc/crac/examples/test_f/causes/snp.fa.should_get
/usr/share/doc/crac/examples/test_f/cigar/consistency2.should_get
/usr/share/doc/crac/examples/test_f/cigar/consistency3.should_get
/usr/share/doc/crac/examples/test_f/cigar/consistency.should_get
/usr/share/doc/crac/examples/test_f/cigar/genome2.fasta
/usr/share/doc/crac/examples/test_f/cigar/genome.fasta
/usr/share/doc/crac/examples/test_f/cigar/read_c4.fasta
/usr/share/doc/crac/examples/test_f/cigar/reads.fasta
/usr/share/doc/crac/examples/test_f/cigar/reads_k18.fasta
/usr/share/doc/crac/examples/test_f/cigar/reads_sam1.fasta
/usr/share/doc/crac/examples/test_f/cigar/reads_sam2.fasta
/usr/share/doc/crac/examples/test_f/index_genomes.sh
/usr/share/doc/crac/examples/test_f/index_genomes.sh.trs
/usr/share/doc/crac/examples/test_f/launch_sg.sh
/usr/share/doc/crac/examples/test_f/launch_sg.sh.trs
/usr/share/doc/crac/examples/test_f/should-get.sh
/usr/share/doc/crac/examples/test_f/splices_adjust/genome.fa
/usr/share/doc/crac/examples/test_f/splices_adjust/splice.fa
/usr/share/doc/crac/examples/test_f/splices_adjust/splice.should_get
/usr/share/doc/crac/examples/test_f/test_index.sh
/usr/share/doc/crac/examples/test_f/test_index.sh.trs
/usr/share/doc/crac/examples/test_f/tmp-genome.fa
/usr/share/doc/crac/examples/test_f/toy1.fastq
/usr/share/doc/crac/examples/test_f/toy2.fastq
/usr/share/doc/crac/examples/test_f/toy.fasta
/usr/share/doc/crac/examples/test_f/toy.fastq
/usr/share/doc/crac/examples/test_f/valgrind.supp
/usr/share/doc/crac/README.gz
/usr/share/doc/crac/README.test
/usr/share/doc/crac/run-unit-test
/usr/share/lintian/overrides/crac
/usr/share/man/man1/crac.1.gz

Field source: Debian 12 (Bookworm) main arm64 revision bookworm-main-arm64:2ddb1737692e8c45c53e8d57c0ce4cd21c78c5703b830c3226b1423566a06c00

Versions, suites, and repositories

Each row is recorded package-index metadata for one version, architecture, suite, and repository. Names, URLs, and sizes are source-reported; a link is a potentially mutable retrieval location, not an OpenFactory redistribution claim or proof that OpenFactory retained the artifact bytes.

Version	Release	Architecture	Repository	Package size	Installed size	Publisher repository artifact
2.5.2+dfsg-5+b1	bookworm / main	arm64	Debian 12 · main · arm64	435 KiB	2.3 MiB	pool/main/c/crac/crac_2.5.2+dfsg-5+b1_arm64.deb

Field source: Debian 12 (Bookworm) main arm64 revision bookworm-main-arm64:2ddb1737692e8c45c53e8d57c0ce4cd21c78c5703b830c3226b1423566a06c00

Checksums and observation dates

For an APT source, signature verification authenticates the repository metadata chain and the Packages index containing this source-reported artifact digest. It does not certify package safety.

2.5.2+dfsg-5+b1 / arm64Observed Sep 1, 2026 to Sep 1, 2026

Verification status: Metadata observed; artifact bytes were not independently fetched or hashed by this catalog import. The digest below is source-reported.

Source-reported sha256: 7adce2542839ceab5ab541700be4d58b60d558a128c387a4e15a7f567b744b01

After downloading that exact artifact, compare its bytes with the source-reported expected digest:

printf '%s  %s\n' '7adce2542839ceab5ab541700be4d58b60d558a128c387a4e15a7f567b744b01' 'crac_2.5.2+dfsg-5+b1_arm64.deb' | sha256sum --check --strict -

A match establishes equality with the repository metadata value. It does not establish safety or catalog-side artifact retrieval.

Field source: Debian 12 (Bookworm) main arm64 revision bookworm-main-arm64:2ddb1737692e8c45c53e8d57c0ce4cd21c78c5703b830c3226b1423566a06c00

Catalog record completeness

The completeness score measures metadata coverage, not software quality, security, compatibility, or suitability.

Summary and description: 25/25
Artifact path and source digest: 25/25
Dependency metadata: 15/15
Package-file index: 15/15
Homepage: 5/5
License text: 0/5
Source package or maintainer: 10/10

Recorded total: 95/100

Field source: Debian 12 (Bookworm) main amd64 revision bookworm-main-amd64:9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5, Debian 12 (Bookworm) main arm64 revision bookworm-main-arm64:2ddb1737692e8c45c53e8d57c0ce4cd21c78c5703b830c3226b1423566a06c00. The cross-OS mapping is catalog-derived from the source-reported homepage; it does not establish authorship or publisher identity

Sources and provenance

Field-source links above resolve here. Each source entry names the metadata publisher, trust tier, exact snapshot revision, signature result, and observation time; catalog-derived mappings are labeled separately.

Debian 12 (Bookworm) main amd64Sep 1, 2026
Authoritative source; repository metadata signature verified, revision bookworm-main-amd64:9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5
Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.
Repository-signature verification record
Signed object
https://deb.debian.org/debian/dists/bookworm/InRelease
Signed-object SHA-256
77737fa4b34f2693e982cc9ee35736816c35a7778fc2d326cc1bbf5b301fe1aa
Signer fingerprint
4CB50190207B4758A3F73A796ED0E7B82643E131
Keyring revision
debian-archive-keyring.gpg
SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
Tool and policy
gpgv (GnuPG) 2.4.9
openfactory-software-catalog-signature-v1
Verification time
Sep 1, 2026
Signed Release → package-index hash linkage
Path: main/binary-amd64/Packages.xz
Expected SHA-256: 9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5
Observed SHA-256: 9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5
Result: match verified
Debian 12 (Bookworm) main arm64Sep 1, 2026
Authoritative source; repository metadata signature verified, revision bookworm-main-arm64:2ddb1737692e8c45c53e8d57c0ce4cd21c78c5703b830c3226b1423566a06c00
Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.
Repository-signature verification record
Signed object
https://deb.debian.org/debian/dists/bookworm/InRelease
Signed-object SHA-256
77737fa4b34f2693e982cc9ee35736816c35a7778fc2d326cc1bbf5b301fe1aa
Signer fingerprint
4CB50190207B4758A3F73A796ED0E7B82643E131
Keyring revision
debian-archive-keyring.gpg
SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
Tool and policy
gpgv (GnuPG) 2.4.9
openfactory-software-catalog-signature-v1
Verification time
Sep 1, 2026
Signed Release → package-index hash linkage
Path: main/binary-arm64/Packages.xz
Expected SHA-256: 2ddb1737692e8c45c53e8d57c0ce4cd21c78c5703b830c3226b1423566a06c00
Observed SHA-256: 2ddb1737692e8c45c53e8d57c0ce4cd21c78c5703b830c3226b1423566a06c00
Result: match verified