Linux workstation

Debian 12 (Bookworm) native package

ncbi-tools-x11

NCBI libraries for biology applications (X-based utilities)

Packages / Debian 12 (Bookworm) / science / ncbi-tools-x11

[Source: ncbi-tools6]

Package: ncbi-tools-x11 (6.1.20170106+dfsg1-10)

Maintainers:

Debian Med Packaging Team

External Resources:

Homepage: [www.ncbi.nlm.nih.gov]

Similar packages:

  • [libncbi6]

    NCBI libraries for biology applications

  • [libncbi6-dev]

    NCBI libraries for biology applications (development files)

  • [libvibrant6b]

    NCBI libraries for graphic biology applications

  • [libvibrant6-dev]

    NCBI libraries for graphic biology applications (development files)

  • [ncbi-cn3d]

    3-dimensional viewer for biological molecules

  • [ncbi-data]

    Platform-independent data for the NCBI toolkit

  • [ncbi-rrna-data]

    large rRNA BLAST databases distributed with the NCBI toolkit

  • [ncbi-tools-bin]

    NCBI libraries for biology applications (text-based utilities)

NCBI libraries for biology applications (X-based utilities)

Other Packages Related to ncbi-tools-x11:

  • dep: [libncbi6] (<< 6.1.20170106+dfsg1.1)

    NCBI libraries for biology applications

  • dep: [libncbi6] (>= 6.1.20170106+dfsg1)

    NCBI libraries for biology applications

  • dep: [libvibrant6b] (<< 6.1.20170106+dfsg1.1)

    NCBI libraries for graphic biology applications

  • dep: [libvibrant6b] (>= 6.1.20170106+dfsg1)

    NCBI libraries for graphic biology applications

  • dep: [ncbi-cn3d]

    3-dimensional viewer for biological molecules

  • dep: [libc6] (>= 2.34)

    GNU C Library: Shared libraries

  • sug: [ncbi-tools-bin]

    NCBI libraries for biology applications (text-based utilities)

Download ncbi-tools-x11

ArchitecturePackage SizeInstalled SizeFiles
amd641.1 MiB2.8 MiB[list of files]
arm641.0 MiB3.0 MiB[list of files]

Package file paths (60)

Paths come from the repository package-file index for the observed builds. They describe archive/package associations, not every file that will exist on a running system after maintainer scripts, alternatives, generated state, diversions, or installation choices.

  • /usr/bin/ddv
  • /usr/bin/entrez
  • /usr/bin/entrez2
  • /usr/bin/Psequin
  • /usr/bin/sbtedit
  • /usr/bin/sequin
  • /usr/bin/udv
  • /usr/share/applications/ddv.desktop
  • /usr/share/applications/entrez2.desktop
  • /usr/share/applications/Psequin.desktop
  • /usr/share/applications/sbtedit.desktop
  • /usr/share/applications/udv.desktop
  • /usr/share/doc-base/ncbi-tools-x11.ncbi-tools-firewall
  • /usr/share/doc-base/ncbi-tools-x11.sequin
  • /usr/share/doc/ncbi-tools-x11/bkgd.gif
  • /usr/share/doc/ncbi-tools-x11/changelog.Debian.gz
  • /usr/share/doc/ncbi-tools-x11/changelog.gz
  • /usr/share/doc/ncbi-tools-x11/copyright
  • /usr/share/doc/ncbi-tools-x11/firedialog.gif
  • /usr/share/doc/ncbi-tools-x11/firewall.html
  • /usr/share/doc/ncbi-tools-x11/images/affil.png
  • /usr/share/doc/ncbi-tools-x11/images/annot.png
  • /usr/share/doc/ncbi-tools-x11/images/authors.png
  • /usr/share/doc/ncbi-tools-x11/images/cds_edit.png
  • /usr/share/doc/ncbi-tools-x11/images/contact.png
  • /usr/share/doc/ncbi-tools-x11/images/desktop.png
  • /usr/share/doc/ncbi-tools-x11/images/format.png
  • /usr/share/doc/ncbi-tools-x11/images/genbank.png
  • /usr/share/doc/ncbi-tools-x11/images/graphic.png
  • /usr/share/doc/ncbi-tools-x11/images/loc_page.png
  • /usr/share/doc/ncbi-tools-x11/images/logo.png
  • /usr/share/doc/ncbi-tools-x11/images/ncbi_sequin.css
  • /usr/share/doc/ncbi-tools-x11/images/net_cfg.png
  • /usr/share/doc/ncbi-tools-x11/images/nucaln.png
  • /usr/share/doc/ncbi-tools-x11/images/nucset.png
  • /usr/share/doc/ncbi-tools-x11/images/nucsing1.png
  • /usr/share/doc/ncbi-tools-x11/images/nucsing2.png
  • /usr/share/doc/ncbi-tools-x11/images/organism.png
  • /usr/share/doc/ncbi-tools-x11/images/props_pg.png
  • /usr/share/doc/ncbi-tools-x11/images/protein1.png
  • /usr/share/doc/ncbi-tools-x11/images/protein2.png
  • /usr/share/doc/ncbi-tools-x11/images/sequence.png
  • /usr/share/doc/ncbi-tools-x11/images/submit.png
  • /usr/share/doc/ncbi-tools-x11/images/update.png
  • /usr/share/doc/ncbi-tools-x11/images/validate.png
  • /usr/share/doc/ncbi-tools-x11/images/welcome.png
  • /usr/share/doc/ncbi-tools-x11/left.gif
  • /usr/share/doc/ncbi-tools-x11/ncbi2.css
  • /usr/share/doc/ncbi-tools-x11/NEWS.Debian.gz
  • /usr/share/doc/ncbi-tools-x11/README.gz
  • /usr/share/doc/ncbi-tools-x11/README.sequin.gz
  • /usr/share/doc/ncbi-tools-x11/sequin.htm
  • /usr/share/doc/ncbi-tools-x11/spacer10.gif
  • /usr/share/man/man1/ddv.1.gz
  • /usr/share/man/man1/entrez.1.gz
  • /usr/share/man/man1/entrez2.1.gz
  • /usr/share/man/man1/Psequin.1.gz
  • /usr/share/man/man1/sbtedit.1.gz
  • /usr/share/man/man1/sequin.1.gz
  • /usr/share/man/man1/udv.1.gz

Field source: Debian 12 (Bookworm) main amd64 revision bookworm-main-amd64:9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5

Use this package

OpenFactory can boot this operating system in a browser VM, or start a build that includes the native package name from this record.

Try Debian 12 (Bookworm) in the browserBuild an image that includes ncbi-tools-x11

Versions, suites, and repositories

Each row is recorded package-index metadata for one version, architecture, suite, and repository. Names, URLs, and sizes are source-reported; a link is a potentially mutable retrieval location, not an OpenFactory redistribution claim or proof that OpenFactory retained the artifact bytes.

VersionReleaseArchitectureRepositoryPackage sizeInstalled sizePublisher repository artifact
6.1.20170106+dfsg1-10bookworm / mainamd64Debian 12 · main · amd641.1 MiB2.8 MiBpool/main/n/ncbi-tools6/ncbi-tools-x11_6.1.20170106+dfsg1-10_amd64.deb
6.1.20170106+dfsg1-10bookworm / mainarm64Debian 12 · main · arm641.0 MiB3.0 MiBpool/main/n/ncbi-tools6/ncbi-tools-x11_6.1.20170106+dfsg1-10_arm64.deb

Field source: Debian 12 (Bookworm) main amd64 revision bookworm-main-amd64:9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5

Checksums and observation dates

For an APT source, signature verification authenticates the repository metadata chain and the Packages index containing this source-reported artifact digest. It does not certify package safety.

6.1.20170106+dfsg1-10 / amd64Observed Sep 1, 2026 to Sep 1, 2026

Verification status: Metadata observed; artifact bytes were not independently fetched or hashed by this catalog import. The digest below is source-reported.

Source-reported sha256: 869572ccbe16541c8dc27cdcff13e98e4ce466813a4170ec0e36692ac6181c89

After downloading that exact artifact, compare its bytes with the source-reported expected digest:

printf '%s %s\n' '869572ccbe16541c8dc27cdcff13e98e4ce466813a4170ec0e36692ac6181c89' 'ncbi-tools-x11_6.1.20170106+dfsg1-10_amd64.deb' | sha256sum --check --strict -

A match establishes equality with the repository metadata value. It does not establish safety or catalog-side artifact retrieval.

Field source: Debian 12 (Bookworm) main amd64 revision bookworm-main-amd64:9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5

6.1.20170106+dfsg1-10 / arm64Observed Sep 1, 2026 to Sep 1, 2026

Verification status: Metadata observed; artifact bytes were not independently fetched or hashed by this catalog import. The digest below is source-reported.

Source-reported sha256: 03a8233c63afdb4e0941e758acbe6b50ee2c6d35140fc334d2cf7b0b5094a08f

After downloading that exact artifact, compare its bytes with the source-reported expected digest:

printf '%s %s\n' '03a8233c63afdb4e0941e758acbe6b50ee2c6d35140fc334d2cf7b0b5094a08f' 'ncbi-tools-x11_6.1.20170106+dfsg1-10_arm64.deb' | sha256sum --check --strict -

A match establishes equality with the repository metadata value. It does not establish safety or catalog-side artifact retrieval.

Field source: Debian 12 (Bookworm) main arm64 revision bookworm-main-arm64:2ddb1737692e8c45c53e8d57c0ce4cd21c78c5703b830c3226b1423566a06c00

Catalog record completeness

The completeness score measures metadata coverage, not software quality, security, compatibility, or suitability.

Summary and description
25/25
Artifact path and source digest
25/25
Dependency metadata
15/15
Package-file index
15/15
Homepage
5/5
License text
0/5
Source package or maintainer
10/10

Recorded total: 95/100

Field source: Debian 12 (Bookworm) main amd64 revision bookworm-main-amd64:9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5, Debian 12 (Bookworm) main arm64 revision bookworm-main-arm64:2ddb1737692e8c45c53e8d57c0ce4cd21c78c5703b830c3226b1423566a06c00. The cross-OS mapping is catalog-derived from the source-reported homepage; it does not establish authorship or publisher identity

Sources and provenance

Field-source links above resolve here. Each source entry names the metadata publisher, trust tier, exact snapshot revision, signature result, and observation time; catalog-derived mappings are labeled separately.

  • Debian 12 (Bookworm) main amd64Sep 1, 2026

    Authoritative source; repository metadata signature verified, revision bookworm-main-amd64:9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5

    Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.

    Repository-signature verification record
    Signed-object SHA-256
    77737fa4b34f2693e982cc9ee35736816c35a7778fc2d326cc1bbf5b301fe1aa
    Signer fingerprint
    4CB50190207B4758A3F73A796ED0E7B82643E131
    Keyring revision
    debian-archive-keyring.gpg
    SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
    Tool and policy
    gpgv (GnuPG) 2.4.9
    openfactory-software-catalog-signature-v1
    Verification time
    Sep 1, 2026
    Signed Release → package-index hash linkage

    Path: main/binary-amd64/Packages.xz
    Expected SHA-256: 9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5
    Observed SHA-256: 9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5
    Result: match verified

  • Debian 12 (Bookworm) main arm64Sep 1, 2026

    Authoritative source; repository metadata signature verified, revision bookworm-main-arm64:2ddb1737692e8c45c53e8d57c0ce4cd21c78c5703b830c3226b1423566a06c00

    Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.

    Repository-signature verification record
    Signed-object SHA-256
    77737fa4b34f2693e982cc9ee35736816c35a7778fc2d326cc1bbf5b301fe1aa
    Signer fingerprint
    4CB50190207B4758A3F73A796ED0E7B82643E131
    Keyring revision
    debian-archive-keyring.gpg
    SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
    Tool and policy
    gpgv (GnuPG) 2.4.9
    openfactory-software-catalog-signature-v1
    Verification time
    Sep 1, 2026
    Signed Release → package-index hash linkage

    Path: main/binary-arm64/Packages.xz
    Expected SHA-256: 2ddb1737692e8c45c53e8d57c0ce4cd21c78c5703b830c3226b1423566a06c00
    Observed SHA-256: 2ddb1737692e8c45c53e8d57c0ce4cd21c78c5703b830c3226b1423566a06c00
    Result: match verified

ncbi-tools-x11 Package for Debian 12 (Bookworm) | OpenFactory